DY257991

Overview
NameDY257991
Unique NameDY257991
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1105
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257991 vs. ExPASy Swiss-Prot
Match: APMAP_CHICK (Adipocyte plasma membrane-associated protein OS=Gallus gallus GN=APMAP PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 5.163e-23
Identity = 78/254 (30.71%), Postives = 124/254 (48.82%), Query Frame = 1
Query:  190 PISPVLDEVPQPAVLSAT-----QLQDFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQDGTWVNWKFI---------DSQTL---VGLTSTKEGHLIICDNANGLHKVSEDGVENFL-----SYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERXGKLETFAENLPGAPDNINLAPDGTF 882
            PI P    + +P +L+       +LQ   ++ E  +  PE   ++   V++T T DG I +++DG       I         D  T    +G+       L + D   GL++V+    E  +     + + G KL F ND+    DG  +YFT SSSK+   ++   ++EG   G+LL+YD  +    ++  G  F NGV LS  ED+V+V E+   R R+Y++ G   G  + F EN+PG PDNI L+  G +
Sbjct:   63 PIDPQPISLKEPPLLTGVLEPNNKLQKAERLWENQLVGPESI-VNIGDVLFTGTADGKILKIEDGEVQTVARIGHGPCGTPEDEPTCGRPLGIRVGPNNTLFVADAYYGLYEVNPGTGETKMLVSTKTLIEGQKLSFLNDLTVTQDGRKIYFTDSSSKWQRRDFLFLVMEGTDDGRLLEYDTVTKEVKVLMVGLRFPNGVQLSPAEDFVLVLETAMARIRRYYVSGLMKGGADMFVENMPGLPDNIRLSSSGGY 315          
BLAST of DY257991 vs. ExPASy Swiss-Prot
Match: APMAP_RAT (Adipocyte plasma membrane-associated protein OS=Rattus norvegicus GN=Apmap PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 6.744e-23
Identity = 79/255 (30.98%), Postives = 125/255 (49.02%), Query Frame = 1
Query:  187 SPISPVLDEVPQPAVLSA-----TQLQDFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQDGTWVN--------WKFIDSQTL----VGLTSTKEGHLIICDNANGLHKVSED--GVENFLSY---VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERXGKLETFAENLPGAPDNINLAPDGTF 882
            SPI P      +P  +       T+L+   ++ E  +N PE   ++   V++T T DG + +L++G             K  D +      +G+     G L + D   GL +V+     V+  LS    + G K+ F ND+    DG  +YFT SSSK+   +Y L ++EG   G+LL+YD  +    ++ D   F NGV LS +ED+V+V E+   R R+ ++ G   G  + F EN+PG PDNI  +  G +
Sbjct:   23 SPIDPQSFSFKEPPFMFGVLQPNTKLRQAERLFENQLNGPESI-VNIGDVLFTGTADGRVVKLENGEIETIARFGSGPCKTRDDEPTCGRPLGIRVGPNGTLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVNDLTITRDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETAMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGY 276          
BLAST of DY257991 vs. ExPASy Swiss-Prot
Match: APMAP_BOVIN (Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.150e-22
Identity = 84/271 (31.00%), Postives = 133/271 (49.08%), Query Frame = 1
Query:  139 FLLVCLIAFLLQIVYFSPISPVLDEVPQPAVLSA-----TQLQDFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQDGTWVN--------WKFIDSQTL----VGLTSTKEGHLIICDNANGLHKVS--EDGVENFLSY---VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERXGKLETFAENLPGAPDNINLAPDGTF 882
            FL + L+  L  ++  SPI P      +P +        T+LQ   ++ E  +  PE  + +   V++T T DG + +L++G             K  D +      +G+ +   G L + D   GL +V+  +  V+  LS    + G K+ F ND+    DG  +YFT SSSK+   +Y L ++EG   G+LL+YD  +    ++ D   F NGV LS  ED+V+V E    R R++++ G   G  + F ENLPG PDNI  +  G +
Sbjct:   48 FLTIPLLGAL--VLLDSPIDPEPLSFKEPPLFLGVLQPNTKLQQAERLFENQLVGPESIA-NIGDVMFTGTADGRVVKLENGEVETIARFGSGPCKTRDDEPACGRPLGIRAGPNGTLFVVDAYKGLFEVNPWKREVKLLLSSETPIEGRKMSFLNDLTVTRDGRKIYFTDSSSKWQRRDYLLLLMEGTDDGRLLEYDTQTKEVKVLLDHLRFPNGVQLSPAEDFVLVVELAMVRIRRFYVSGLMKGGADVFVENLPGFPDNIRASSSGGY 315          
BLAST of DY257991 vs. ExPASy Swiss-Prot
Match: APMAP_MOUSE (Adipocyte plasma membrane-associated protein OS=Mus musculus GN=Apmap PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.502e-22
Identity = 87/295 (29.49%), Postives = 141/295 (47.80%), Query Frame = 1
Query:   73 PETSKKGRTSSKLFVPACYSFGFLLVCLIAFLL--QIVYFSPISPVLDEVPQPAVLSA-----TQLQDFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQDGTWVN--------WKFIDSQTL----VGLTSTKEGHLIICDNANGLHKVSED--GVENFLSY---VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERXGKLETFAENLPGAPDNINLAPDGTF 882
            PE  +    S ++F     +F  L V L   LL   ++  SPI P      +P  +       T+L+   ++ E  ++ PE   ++   V++T T DG + +L++G             K  D +      +G+ +   G L + D   GL +V+     V+  LS    + G K+ F ND+    DG  +YFT SSSK+   +Y L ++E    G+LL+YD  +    ++ D   F NGV LS +ED+V+V E+   R R+ ++ G   G  + F EN+PG PDNI  +  G +
Sbjct:   25 PEVKEGSSFSGRVFR---MTFLMLAVSLAIPLLGAMMLLESPIDPQSFSFKEPPFMFGVLHPNTKLRQAERLFENQLSGPESI-VNIGDVLFTGTADGRVVKLENGEIETIARFGSGPCKTRDDEPTCGRPLGIRAGPNGTLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVNDLTVTRDGRKIYFTDSSSKWQRRDYLLLVMEATDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETTMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGY 315          
BLAST of DY257991 vs. ExPASy Swiss-Prot
Match: APMAP_SALSA (Adipocyte plasma membrane-associated protein OS=Salmo salar GN=apmap PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.709e-22
Identity = 87/297 (29.29%), Postives = 140/297 (47.14%), Query Frame = 1
Query:   70 EPETSKKGRTSSKLFVPACYSFGFLLVCLIAFLLQIVYF--SPISPVLDEVPQPAVLSAT-----QLQDFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQDGTWVNWKFIDSQTL-------------VGLTSTKEGHLIICDNANGLHKVSE--DGVENFLS---YVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERXGKLETFAENLPGAPDNINLAPDGTF 882
            EP+       S K+F     + G    CLI  LL + +   SPI P L  + +P ++S       +L++  ++ E  +  PE  + +   +IYT T DG I +++  +      +                  +G+     G L + D   GL KV+     V N +S    V G +L F ND+    DG  +YFT SSS++   +Y   I+E    G++L+YD  +   T++ +   FANG+ L  DE+ V+V E+   R R+  + G   G ++TF +NLPG PDNI  +  G +
Sbjct:   24 EPQYKGTSTYSGKVFRVILVTLGG---CLILPLLVVFFLLESPIHPELLSLSEPPLMSGCYEPNFKLREAQRLFEDQLVGPESIA-NFGDLIYTGTADGKIVKIEGKSITVIARLGKPPCDGSREQEPSCGRPLGIRVGPNGTLFVADAYLGLFKVNPVTGEVTNLVSAGQMVGGRRLSFVNDLDVTQDGRKVYFTDSSSRWQRRDYLHLIMEATADGRVLEYDTETKEVTVLMENLRFANGIQLFPDEESVLVAETTMARIRRVHVSGLNKGGMDTFVDNLPGFPDNIRRSSSGGY 316          
BLAST of DY257991 vs. ExPASy Swiss-Prot
Match: APMAP_HUMAN (Adipocyte plasma membrane-associated protein OS=Homo sapiens GN=APMAP PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.272e-21
Identity = 88/295 (29.83%), Postives = 140/295 (47.46%), Query Frame = 1
Query:   73 PETSKKGRTSSKLFVPACYSFGFLLVCLIAFLL--QIVYFSPISPVLDEVPQPAVLSA-----TQLQDFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQDGTWVN--------WKFIDSQTL----VGLTSTKEGHLIICDNANGLHKVS--EDGVENFLSY---VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERXGKLETFAENLPGAPDNINLAPDGTF 882
            PE       S ++F     +F  L V L   LL   ++  SPI P      +P +L       T+L+   ++ E  +  PE  +     V++T T DG + +L++G             K  D + +    +G+ +   G L + D   GL +V+  +  V+  LS    + G  + F ND+    DG  +YFT SSSK+   +Y L ++EG   G+LL+YD  +    ++ D   F NGV LS  ED+V+V E+   R R+ ++ G   G  + F EN+PG PDNI  +  G +
Sbjct:   26 PEAKDGSSFSGRVFR---VTFLMLAVSLTVPLLGAMMLLESPIDPQPLSFKEPPLLLGVLHPNTKLRQAERLFENQLVGPESIA-HIGDVMFTGTADGRVVKLENGEIETIARFGSGPCKTRDDEPVCGRPLGIRAGPNGTLFVADAYKGLFEVNPWKREVKLLLSSETPIEGKNMSFVNDLTVTQDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTREVKVLLDQLRFPNGVQLSPAEDFVLVAETTMARIRRVYVSGLMKGGADLFVENMPGFPDNIRPSSSGGY 316          
BLAST of DY257991 vs. ExPASy Swiss-Prot
Match: APMAP_DANRE (Adipocyte plasma membrane-associated protein OS=Danio rerio GN=apmap PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.114e-17
Identity = 80/295 (27.12%), Postives = 136/295 (46.10%), Query Frame = 1
Query:   70 EPETSKKGRTSSKLF-VPACYSFGFLLVCLIAFLLQIVYFSPISPVLDEVPQPAVLSAT-----QLQDFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQDGTWVNWKFIDSQTL------------VGLTSTKEGHLIICDNANGLHKVSE--DGVENFLSY---VNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERXGKLETFAENLPGAPDNINLAPDGTF 882
            EP+       S K+F V       FLL+ L+  +   V  SPI P +  + +P +++       +L+   ++ E  +  PE  + +   V YT T DG I +++         I                 +G+     G L + D   GL +V+     V++ +S    + G +L F ND+    DG  +YFT SSS++   ++   I+E    G++L+YD  +    ++ +   F NG+ L  DE+ V+V E+   R ++  + G   G ++TF ENLPG PDNI  +  G +
Sbjct:   24 EPQYKATSTYSGKVFRVTLLTMVAFLLLPLLVVVF--VLESPIQPEVFSLNEPPLMTGCYEPNLKLRQAERLFEERLVGPESLA-NIGDVFYTGTADGKIVKIEGRNIHVLATIGKPPCGSREHEHTCGRPLGIRVGPNGTLFVADAYLGLFEVNPVTGEVKSLVSTEKRIAGRRLGFVNDLDVTQDGKKVYFTDSSSRWQRRDFMHLIMEATADGRVLEYDTETKEVNVMMENLRFPNGIQLFPDEESVLVAETTMARIKRVHVSGLNKGGMDTFIENLPGFPDNIRRSSSGGY 315          
BLAST of DY257991 vs. ExPASy Swiss-Prot
Match: STS1_ARATH (Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.506e-14
Identity = 47/147 (31.97%), Postives = 78/147 (53.06%), Query Frame = 1
Query:  427 KEGHLIICDNANGLHKVSEDG--VENFLSYVNGSKLRFANDV-VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERXGKLETFAENLPGAPDNI 858
            K G L + D   GLH +S  G         V+G   +F + + V+ + G +YFT  SS++ P +  + +      G+L KYDPS+ + T++ +G   + G A+S D  +V+V +  K   ++YW+KG + G  E F  ++   PDNI
Sbjct:  107 KTGDLYVADAPLGLHVISPAGGLATKITDSVDGKPFKFLDGLDVDPTTGVVYFTSFSSRFSPIQVLIALGLKDATGKLYKYDPSTKVVTVLMEGLSGSAGCAVSSDGSFVLVSQFTKSNIKRYWIKGPKAGSSEDFTNSVSN-PDNI 252          
BLAST of DY257991 vs. ExPASy Swiss-Prot
Match: STS3_ARATH (Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.568e-14
Identity = 47/149 (31.54%), Postives = 75/149 (50.34%), Query Frame = 1
Query:  421 STKEGHLIICDNANGLHKVSEDG--VENFLSYVNGSKLRFANDV-VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERXGKLETFAENLPGAPDNI 858
            +TK G L + D A GLH +   G   +     V G    F + + V+ + G +YFT  SS + P +    +      G+  KYDPS  + T++ +G   + G A+S D  +V+V +  K   ++YW+KG + G  E F  ++   PDNI
Sbjct:  107 NTKTGDLYVADAALGLHVIPRRGGLAKKIADSVGGKPFLFLDGLDVDPTTGVVYFTSFSSTFGPRDVLKAVATKDSTGKFFKYDPSKKVVTVLMEGLSGSAGCAVSSDGSFVLVGQFTKSNIKRYWIKGSKAGTSEDFTNSVSN-PDNI 254          
The following BLAST results are available for this feature:
BLAST of DY257991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
APMAP_CHICK5.163e-2330.71Adipocyte plasma membrane-associated protein OS=Ga... [more]
APMAP_RAT6.744e-2330.98Adipocyte plasma membrane-associated protein OS=Ra... [more]
APMAP_BOVIN1.150e-2231.00Adipocyte plasma membrane-associated protein OS=Bo... [more]
APMAP_MOUSE1.502e-2229.49Adipocyte plasma membrane-associated protein OS=Mu... [more]
APMAP_SALSA5.709e-2229.29Adipocyte plasma membrane-associated protein OS=Sa... [more]
APMAP_HUMAN1.272e-2129.83Adipocyte plasma membrane-associated protein OS=Ho... [more]
APMAP_DANRE1.114e-1727.12Adipocyte plasma membrane-associated protein OS=Da... [more]
STS1_ARATH1.506e-1431.97Strictosidine synthase 1 OS=Arabidopsis thaliana G... [more]
STS3_ARATH2.568e-1431.54Strictosidine synthase 3 OS=Arabidopsis thaliana G... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAB2CA12ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257991 ID=DY257991; Name=DY257991; organism=Citrus clementina; type=EST; length=1105bp
AATAAATTTGAGCTTGGCGTTAGTAGGTAGCAAAGCAGCTAGTGAGCAAT
GGCTCCTAGCAGGAAGACAGAACCAGAAACCAGCAAGAAAGGGAGGACCT
CATCAAAACTCTTTGTGCCGGCTTGTTATTCGTTTGGGTTCTTGCTCGTC
TGTTTGATTGCTTTTTTACTTCAAATCGTCTACTTCTCGCCAATATCTCC
AGTCTTGGATGAGGTGCCCCAGCCCGCTGTGTTGTCAGCCACTCAGTTAC
AGGATTTTATTAAAGTTGGAGAGGGAAGTGTGAATCACCCGGAGGATGCT
TCTATGGATAAAAATGGCGTGATATATACAGCTACAAGAGATGGTTGGAT
CAAGAGATTGCAAGATGGAACTTGGGTCAATTGGAAATTTATTGACAGTC
AAACTCTAGTTGGACTTACATCGACCAAAGAAGGCCATCTAATTATATGC
GACAACGCAAACGGTTTGCACAAGGTCAGCGAAGACGGCGTAGAGAACTT
TTTATCATACGTCAATGGTTCTAAACTGAGGTTTGCAAATGATGTAGTTG
AAGCATCAGATGGTAGTTTATATTTTACTGTATCAAGCTCCAAATATTTA
CCCCACGAGTATTGCCTGGATATTCTTGAGGGGAAACCTCATGGTCAGCT
ACTCAAGTATGATCCTTCATCCAATATAACAACACTTGTGGCTGATGGTT
TCTACTTTGCTAATGGCGTTGCACTCTCAAGAGATGAAGATTATGTTGTT
GTTTGTGAATCATGGAAATTCAGGTGCCGTAAGTATTGGCTGAAGGGCGA
GCGTNAAGGGAAATTAGAAACTTTCGCTGAAAACCTACCAGGTGCACCTG
ATAACATCAACCTTGCCCCCGATGGCACATTTTTGGATTGCAATAATAAA
GTTGGATGCTAGGAGGATGAAGGTTTTAAACAGTTTCCAGCCTAATCAAA
CATTGTTTCAACCCCATAATCCAAAACTGGTTCTCTCAATTCATCCACCT
TAGGGCGGGGGGAACACACTTTAATAATTGTTTGCCAAAATAAAGGCCCC
TAAAATCCAAAAAATCTTTTTTTGAATCCCACCCGGGAAAAGTTTTAATG
CTCGT
back to top