DY258189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258189 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 3.514e-73 Identity = 136/235 (57.87%), Postives = 162/235 (68.94%), Query Frame = 2 Query: 65 MPEKITAENILDNLVETIPDKVQKQKXXXXXXXXXXXXXXXRFNRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFLS 769 MP+K E+++ +LV+ + VQK K RFNRLF RQKP+HH+LGGGKSADVLLWRNKKISASVLMGATAIWVLFEW+N+HFL++VC+AL+LGM+AQF W N SG NRS S+VPR VLP + FA +G V VN L LQD++C G LKQ +GSCCNFLTVLYIGFV AHT+PVLYE++EDEVD YKKLD+GFLS Sbjct: 1 MPDKNIVEDVIGDLVDNFTETVQKNKHGSSFFEQEDSVSS-RFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLS 234
BLAST of DY258189 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.261e-38 Identity = 84/191 (43.98%), Postives = 112/191 (58.64%), Query Frame = 2 Query: 197 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFLS 769 RLFGR+KPVH +LGGG ADV LWR+KK+SASVL ATAIWVLFE + YHFL++VC L+ + A F N N++P K+P + E F I + + +N+A +L+ I+ G LK+ +G+ NFLT++YI FV HT+P+LYEKHED+VD Y D LS Sbjct: 51 RLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLS 241
BLAST of DY258189 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 8.177e-38 Identity = 79/191 (41.36%), Postives = 113/191 (59.16%), Query Frame = 2 Query: 197 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFLS 769 R+FGR+KPVH +LGGGK ADV LWR+KK+S +VL ATAIWVLFE + YH L+++C +L + F W N L N++ ++P +P E F + +++ +N+A +L+ I+ G LK+ +G+ NFLT++YI FV HT+P+LYEKHED+VD Y D LS Sbjct: 51 RMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLS 241
BLAST of DY258189 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.181e-36 Identity = 73/191 (38.22%), Postives = 107/191 (56.02%), Query Frame = 2 Query: 197 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFLS 769 RLFGR++PVH +LGGGK AD+ +W+NKK+S VL GATA WV+FE + YH LT++C +++ + F W N + N+SP K+P +P E + + + +N L++I+ G LK+ +G C NFLT+ YI V T+P+ Y+K+ED+VD Y LD LS Sbjct: 72 RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLS 262
BLAST of DY258189 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.798e-35 Identity = 68/191 (35.60%), Postives = 107/191 (56.02%), Query Frame = 2 Query: 197 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFLS 769 RLFGR++PVH +LGGGK AD+ +W++KK+S V GAT WVLFE + YH LT++C +++ + F W N + ++SP K+P +P E + + + +N + L++I+ G +K+ +G C +FLT+ YI V T+P+ Y+K+ED+VDS Y LD+ S Sbjct: 68 RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFS 258
BLAST of DY258189 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.961e-35 Identity = 74/191 (38.74%), Postives = 105/191 (54.97%), Query Frame = 2 Query: 197 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFLS 769 RLFGR++P+H L GGGK AD+ LWRNKK+S VL AT W+LFE L Y+ LT+ +L + F W + S ++SP +P +P +V + + + +N +L+DI+ G LK+ +GS CNFLT++YI V T+PVLYEK+ED+VD Y + D LS Sbjct: 47 RLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLS 237
BLAST of DY258189 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.105e-34 Identity = 75/190 (39.47%), Postives = 101/190 (53.16%), Query Frame = 2 Query: 197 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFL 766 RLFGR+KPVH +LGGGK AD+ LWRNKK+S VL TA WVLFE YH L +C + + A F W N ++S +P +P + + + + +N L LL++I+ G +K+ IGSC NFLT+ Y V T+PVLYEK+ED+VD+ Y LD L Sbjct: 51 RLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVL 240
BLAST of DY258189 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.548e-31 Identity = 68/191 (35.60%), Postives = 103/191 (53.93%), Query Frame = 2 Query: 197 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFLS 769 +LF RQ+ +H + GGGK AD+LLWR KI+A++++G + +W L E + Y+F+T++C A + ML F W S N +P VL F + + N+ L L D++CG IG+ NF+ +L+IGFV+ TLPV+YE +ED+VD+ YKK+D+ LS Sbjct: 22 KLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLS 212
BLAST of DY258189 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.183e-28 Identity = 67/191 (35.08%), Postives = 102/191 (53.40%), Query Frame = 2 Query: 197 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFLS 769 R+FGR++P+H +LGGGK ADVLLWR+KK++ +L T IW+LF + LT +C +L +L F W S N+SP + +P + + + +N A L+ I+ +K IG+ +FL++LYI FV HT+P+LYEK+EDE+D Y+ ++ FLS Sbjct: 53 RMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLW---SNALNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKFLS 240
BLAST of DY258189 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 7.430e-23 Identity = 57/191 (29.84%), Postives = 94/191 (49.21%), Query Frame = 2 Query: 197 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXIGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFLS 769 RL GRQ VH +GGGK+AD+LLWR + +S V++ +T W++FE+ FL++ L++ ++ F +S NR +P VL E+ + + +N L + D++ G + IGS + T+LYIG + + T+P LY K++ +VD YK +D +S Sbjct: 24 RLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVIS 214 The following BLAST results are available for this feature:
BLAST of DY258189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258189 ID=DY258189; Name=DY258189; organism=Citrus clementina; type=EST; length=982bpback to top |