DY258225

Overview
NameDY258225
Unique NameDY258225
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1328
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258225 vs. ExPASy Swiss-Prot
Match: BCS1B_DICDI (Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum GN=bcsl1b PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 9.830e-27
Identity = 74/219 (33.79%), Postives = 116/219 (52.97%), Query Frame = 2
Query:  329 YDAIRWDSVKLEHPAT---FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQL-GNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDR----RNGNENNXXXXXXXXXXXXVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 961
            Y ++  D  +  HP       ++ ++      I++D+ +F+   ++Y   G  ++RGYLLYGPPGTGKSS + A+A  L+  +  L L G    D+ L  LL +   RSI+++EDID ++   +     ++ + N                N +  +GG     LT SGLLN +DG+ +S G  RI+  TTNH E+LD  L+RPGR+D+ I +  C  Y
Sbjct:  187 YTSMGTDWRRFGHPRRKRPISSVILDKGKSELIIQDVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSDTSLNQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPSVSSGGSA---LTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCSSY 400          
BLAST of DY258225 vs. ExPASy Swiss-Prot
Match: BCS1_SCHPO (Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe GN=SPAC644.07 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 9.200e-25
Identity = 73/215 (33.95%), Postives = 114/215 (53.02%), Query Frame = 2
Query:  365 HPAT---FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNV-TRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNENNXXXXXXXXXXXXVRKNKTDFAGGKGQHM-LTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAAYYLG 994
            HP +     ++ +E ++K  I +D+  F+R  ++Y   G  ++RGYLLYGPPG+GK+S + A+A  L +D+  L L      D  L  LL +   ++++++ED+D +    +R                           +G  G H  +T SGLLN +DG+ SS  DERII  TTNH E+LDPAL+RPGR+D+  ++    P   R +   + G
Sbjct:  200 HPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVDSAFQGRER---------------------------SGEVGFHANVTFSGLLNALDGVTSS--DERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYG 385          
BLAST of DY258225 vs. ExPASy Swiss-Prot
Match: BCS1_YEAST (Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae GN=BCS1 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 3.496e-24
Identity = 72/210 (34.29%), Postives = 112/210 (53.33%), Query Frame = 2
Query:  383 TLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLG-NVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNENNXXXXXXXXXXXXVRKNKTDFAGGKGQH-MLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGF-RLLAAYYLGITD 1003
            ++ ++  +K  I++D+  F++  ++Y   G  ++RGYLLYGPPG+GK+S + A+A  L +++  L L  N   D  L  L+ +   RSIL++EDID +                            NK    G +G H  +T SGLLN +DG+ SS  +E I   TTNH E+LD A++RPGR+D  + +    PY   ++   +Y G TD
Sbjct:  227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAF---------------------------NKRSQTGEQGFHSSVTFSGLLNALDGVTSS--EETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATPYQVEKMFMKFYPGETD 407          
BLAST of DY258225 vs. ExPASy Swiss-Prot
Match: BCS1_XENLA (Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.566e-24
Identity = 65/191 (34.03%), Postives = 105/191 (54.97%), Query Frame = 2
Query:  383 TLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCSVDLPDRRNGNENNXXXXXXXXXXXXVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYC 952
            ++ +E  +   I++D+  F+   ++Y   G  ++RGYLLYGPPG GKSS + A+A  L++ +  + L + +   D    LLS    +SI+++ED+D +    D                       NK +    +G   LT SGLLN +DG+ S+  + RI+  TTNH +RLDPAL+RPGR+D+  ++ +C
Sbjct:  190 SVVLEQGISEKIVQDVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRD----------------------LNKQNPTAYQGMGRLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDVKQYVGHC 356          
BLAST of DY258225 vs. ExPASy Swiss-Prot
Match: BCS1A_DICDI (Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum GN=bcs1la PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.125e-22
Identity = 71/196 (36.22%), Postives = 103/196 (52.55%), Query Frame = 2
Query:  374 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNV-TRDSDLRTLLLSTGNRSILVIEDIDCSV----DLPDRRNGNENNXXXXXXXXXXXXVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 946
            +  ++ +  DLK+ ++ED+  F+  + +Y+  G  ++RGYLLYG PG GKSSL+ A+A  L  D+  + L +    D  +  LL +   +SIL+IEDID +     D  D  N N NN                          + LT SGLLN +DG+ S  G  RI+  TTN  E LD AL+R GR+D+ I +S
Sbjct:  185 SLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAFKSHRDNVDSNNNNSNN-------------------------NNSLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKVS 353          
BLAST of DY258225 vs. ExPASy Swiss-Prot
Match: BCS1_HUMAN (Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.272e-22
Identity = 65/192 (33.85%), Postives = 102/192 (53.12%), Query Frame = 2
Query:  380 DTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCSVDLPDRRNGNENNXXXXXXXXXXXXVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYC 952
            +++ ++  L   I+ D+  F+   ++Y   G  ++RGYLLYGPPG GKSS + A+A  L+  +  L L + +   D    LLS    +S++++ED+D +    D    N                          +G   LT SGLLN +DG+ S+  + RI+  TTNH +RLDPAL+RPGR+D+  ++ YC
Sbjct:  189 NSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKY----------------------QGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYC 356          
BLAST of DY258225 vs. ExPASy Swiss-Prot
Match: BCS1_MOUSE (Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 9.521e-22
Identity = 65/192 (33.85%), Postives = 103/192 (53.65%), Query Frame = 2
Query:  380 DTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCSVDLPDRRNGNENNXXXXXXXXXXXXVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYC 952
            D++ ++  L   I++D+  F+   ++Y   G  ++RGYLLYGPPG GKSS + A+A  L+  +  L L + +   D    LLS    +S++++ED+D +    D    N                          +G   LT SGLLN +DG+ S+  + RI+  TTN+ +RLDPAL+RPGR+D+  ++ YC
Sbjct:  189 DSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPIKY----------------------QGLGRLTFSGLLNALDGVAST--EARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYC 356          
BLAST of DY258225 vs. ExPASy Swiss-Prot
Match: BCS1_BOVIN (Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 9.521e-22
Identity = 65/192 (33.85%), Postives = 102/192 (53.12%), Query Frame = 2
Query:  380 DTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCSVDLPDRRNGNENNXXXXXXXXXXXXVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYC 952
            +++ +E  +   I+ D+  F+   ++Y   G  ++RGYLLYGPPG GKSS + A+A  L+  +  L L + +   D    LLS    +S++++ED+D +    D    N                          +G   LT SGLLN +DG+ S+  + RI+  TTNH +RLDPAL+RPGR+DM  ++ +C
Sbjct:  189 NSVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAENPIKY----------------------QGLGRLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHC 356          
BLAST of DY258225 vs. ExPASy Swiss-Prot
Match: BCS1_DANRE (Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 2.770e-21
Identity = 65/191 (34.03%), Postives = 102/191 (53.40%), Query Frame = 2
Query:  383 TLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCSVDLPDRRNGNENNXXXXXXXXXXXXVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYC 952
            ++ +E  +   I++D+  F+   ++Y   G  ++RGYLLYGPPG GKSS + A+A  L + +  + L + +   D    LLS    +SI+++ED+D +  +       EN                        +G   LT SGLLN +DG+ SS  + RI+  TTN  ERLDPAL+RPGR+D+  ++ +C
Sbjct:  190 SVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRSLSDDRLNHLLSVAPQQSIILLEDVDAAF-VSRELLPTENPLAY--------------------QGMGRLTFSGLLNALDGVASS--EARIVFMTTNFIERLDPALVRPGRVDLKQYVGHC 357          
BLAST of DY258225 vs. ExPASy Swiss-Prot
Match: YL572_MIMIV (Putative AAA family ATPase L572 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L572 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.472e-14
Identity = 53/146 (36.30%), Postives = 77/146 (52.74%), Query Frame = 2
Query:  530 LVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCSVDLPDRRNGNENNXXXXXXXXXXXXVRKNKTD-FAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 961
            ++ A++ + K  +  L L N+  D++L  LL +     +ILV+EDIDC+ +    R   E                K   D     +    LTLSG+LN +DG+++S G  RI++ TTNH E LDPAL+R GR+DM I  S C  Y
Sbjct:    1 MIKAISTHTKRHIHYLILNNIQDDNELINLLNAVNCKETILVLEDIDCASEAVKSRAKEEETVVEKVTDDKSTLENKILADQLKKVEKVSKLTLSGILNSLDGIFNSEG--RIVIMTTNHSEVLDPALIRRGRIDMQIEFSNCDRY 144          
The following BLAST results are available for this feature:
BLAST of DY258225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
BCS1B_DICDI9.830e-2733.79Probable mitochondrial chaperone BCS1-B OS=Dictyos... [more]
BCS1_SCHPO9.200e-2533.95Probable mitochondrial chaperone bcs1 OS=Schizosac... [more]
BCS1_YEAST3.496e-2434.29Mitochondrial chaperone BCS1 OS=Saccharomyces cere... [more]
BCS1_XENLA4.566e-2434.03Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=... [more]
BCS1A_DICDI1.125e-2236.22Probable mitochondrial chaperone BCS1-A OS=Dictyos... [more]
BCS1_HUMAN3.272e-2233.85Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BC... [more]
BCS1_MOUSE9.521e-2233.85Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bc... [more]
BCS1_BOVIN9.521e-2233.85Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1... [more]
BCS1_DANRE2.770e-2134.03Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs... [more]
YL572_MIMIV1.472e-1436.30Putative AAA family ATPase L572 OS=Acanthamoeba po... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3CF12ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258225 ID=DY258225; Name=DY258225; organism=Citrus clementina; type=EST; length=1328bp
TAAGATCGGTCCCAGCATCGAAAGGCTCAAAATATGCAAAACTCCAAATG
AAAAAGTCATCACAATCCGCCTGGAAAAGAACGAACAGATTATTGATTCT
TTCCGAGGGGTACAGCTCAGATGGAGGTTTGCTCTTGTGGAGGCAGCCGA
CGGAAAGGGTAATTCCCATTCTATGAGGCCTGAGAAGCGACTATTTGAGC
TTACATTTCACCAGACTCACAAAGACATGGTCTTGAACTCTTACCTGCCA
CATGTAATCGAGCTAGCAAAGGATATGAAAGATAAGACAAGGGTTTTGAA
GATGTACACACTCCATAGGGTTCCAGATTATGATGCGATCCGGTGGGATT
CGGTCAAACTTGAGCATCCAGCAACCTTTGACACTTTGGCCATGGAACCA
GATCTTAAAGCTACTATCATGGAGGATCTCGATAGGTTTGTTAGGAGGAA
GGAGTTTTACAAGAGAGTTGGCAGAGCATGGAAACGTGGGTACTTGCTGT
ACGGACCTCCAGGCACTGGCAAATCAAGCTTGGTTGCAGCCATGGCCAAC
TATCTCAAGTTTGATGTCTTTGATTTGCAGCTCGGAAATGTTACCCGTGA
CTCCGATCTAAGGACTCTCCTGCTCAGTACTGGGAATAGATCAATCCTTG
TCATCGAAGACATTGATTGCAGTGTCGACTTGCCTGATCGCCGAAATGGA
AATGAAAATAATGCTGATGCTCAGCAGTCCAAGGCCGCGGGCGCAGCTGT
CCGCAAAAACAAGACCGACTTCGCTGGCGGAAAGGGACAGCATATGTTGA
CATTGTCGGGGCTGCTGAACTTCATTGATGGACTATGGTCCAGTTGTGGT
GACGAGAGGATTATCGTATTCACGACCAACCACAAGGAGAGGCTGGATCC
TGCTTTGCTGCGTCCAGGACGCATGGACATGCACATTCACATGTCATATT
GCGGCCCTTATGGGTTCAGGCTGTTAGCTGCCTATTACTTGGGCATTACC
GATGGTGAGCCCAACCTTGTGGCGGAAATTGGAACGTTACTAAAGAACAT
CAACCTAACTCCCGGCTTCAGTTCCGGAAAAAGTTTTATAAAAAACAAAA
AAGGCTTATGTTCCCGCTTTGCGCCCCTTTTTAAATTCCCCCAAACGGAA
AGGGGCGCAAGGGGGCGGGGGGAATGTTTGGTGGAAAAAAAAAAAAAAAA
AACAATATTTTGAGGACAAAATCCCCCTCTCCCCTCTCATCCCCCAAAAC
ACCCCAAAAAAGAGGAAGGATTAAAAATACCCCTTGGCAAAAAAAGGGGG
GAAAGAAAAAGAAAGAAGTGACCCGGCC
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