DY258230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258230 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.196e-23 Identity = 74/219 (33.79%), Postives = 107/219 (48.86%), Query Frame = 1 Query: 274 LEFTVPLDFTNKVPLVVYFHGGAFVISSSAYPKYHTTLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNPEAWLQEFVDFD-KVFLAGDNAGSSIAHYLGLRITDEVRDLKILSIVMIMPYFWGKNPIGVEVT---DHFMKQMVDNW-WLYVCPSDKGCDDPLITPLVESAPSAASLACEKLLVNVADKDVLND 915 LE T PL T VP++++FHGG+F SS+ Y T LV ++VVSV+YR +PEH P A++D AL WV S WLQ D + V+LAGD++G +IAH + +R T+E +K+L +++ P F G+ E T +F+ +W W P + D P P S + K LV VA D++ D Sbjct: 94 LELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKS-----------------RVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNE--GVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQD 293
BLAST of DY258230 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.512e-19 Identity = 69/221 (31.22%), Postives = 105/221 (47.51%), Query Frame = 1 Query: 268 SQLEFTVPLDFTNKVPLVVYFHGGAFVISSSAYPKYHTTLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNPEAWLQEFVDFD-KVFLAGDNAGSSIAHYLGLRITDEVRDLKILSIVMIMPYFWGKNPIGVEVT---DHFMKQMVDNW-WLYVCPSDKGCDDPLITPLVESAPSAASLACEKLLVNVADKDVLND 915 S L+ P+D + VP++++FHGG+F SS+ Y T LV +VVSVNYR APE+P P A++D AL WV N +WL+ D +FLAGD++G +IAH + LR + + +L +++ P F G E + +F+ +W W P + + P P S ++ K LV VA D++ D Sbjct: 93 SILDLEKPVD-GDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWV-----------------NSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGES--GIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRD 293
BLAST of DY258230 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 7.310e-19 Identity = 65/207 (31.40%), Postives = 98/207 (47.34%), Query Frame = 1 Query: 310 VPLVVYFHGGAFVISSSAYPKYHTTLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNPEAWLQEFVDFD-KVFLAGDNAGSSIAHYLGLRITDEVRDLKILSIVMIMPYFWGKNPIGVEVT---DHFMKQMVDNW-WLYVCPSDKGCDDPLITPLVESAPSAASLACEKLLVNVADKDVLND 915 VP++V+FHGG+F SS+ Y T LV +VVSVNYR APE+ P A++D LKWV N +WL+ D ++FLAGD++G +I H + +R + D +L +++ P F G E +F+ +W W P + + P +P + S L+ K LV VA D++ D Sbjct: 104 VPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWV-----------------NSSSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESRID--VLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQD 291
BLAST of DY258230 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.247e-18 Identity = 65/218 (29.82%), Postives = 98/218 (44.95%), Query Frame = 1 Query: 274 LEFTVPLDFTNKVPLVVYFHGGAFVISSSAYPKYHTTLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNPEAWLQEFVDFDKVFLAGDNAGSSIAHYLGLRITDEVRDLKILSIVMIMPYFWGKNPIGVEVT---DHFMKQMVDNW-WLYVCPSDKGCDDPLITPLVESAPSAASLACEKLLVNVADKDVLND 915 LEF P++++FHGG+FV SS++ Y + V + +VVSVNYR APEH P A++D ALKWV S G+ +VFL+GD++G +IAH++ +R DE +K+ +++ F G E +F+ +W W P D D P P + L K L+ V+ D+ D Sbjct: 101 LEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQA----------------RVFLSGDSSGGNIAHHVAVRAADE--GVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCD 300 The following BLAST results are available for this feature:
BLAST of DY258230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258230 ID=DY258230; Name=DY258230; organism=Citrus clementina; type=EST; length=1296bpback to top |