DY258260

Overview
NameDY258260
Unique NameDY258260
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9901 contig Ccv1_Contig9901:53..668. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258260 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.698e-24
Identity = 54/95 (56.84%), Postives = 67/95 (70.53%), Query Frame = 3
Query:   51 MATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 335
            MA +GG R+V    N+ EI +LARFAV+EHNKKQN+ L+F            GTLY ITLEA +GGQKK++EAKVWEKPW+ FKEL+EF  V  +
Sbjct:    1 MAALGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFKHVGDA 95          
BLAST of DY258260 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 5.670e-23
Identity = 52/100 (52.00%), Postives = 69/100 (69.00%), Query Frame = 3
Query:   51 MATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 350
            MA VGGV +V A  N+ E+ +LARFAVDEHNKK+N+ L+F            GTL+ +TLE +E GQKKL+EAKVW KPW+ FKEL+EF   + + + T+
Sbjct:   34 MALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITS 133          
BLAST of DY258260 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.440e-20
Identity = 49/93 (52.69%), Postives = 62/93 (66.67%), Query Frame = 3
Query:   39 TQKTMATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEF 317
            T+KTM  +GGV ++    N+ EI +LARFA+ EHNK+QN  L+F            GT+Y +TLEA EG Q K FEAKVW KPWM FK+L+EF
Sbjct:   29 TEKTMM-LGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEF 120          
BLAST of DY258260 vs. ExPASy Swiss-Prot
Match: CYT12_ORYSJ (Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.001e-19
Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 3
Query:   24 FIIRLTQKTMA--TVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSST 347
            F++      MA   +GG  +  + AN+ E   LARFAVDEHNK++N+ L+F            GTL+ +TLEA+E G+KK++EAKVW KPW+ FKEL+EF     + + T
Sbjct:   34 FLVGSASLAMAGHVLGGAHDAPSAANSVETDALARFAVDEHNKRENALLEFVRVVEAKEQVVAGTLHHLTLEALEAGRKKVYEAKVWVKPWLDFKELQEFRNTGDATTFT 143          
BLAST of DY258260 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 4.967e-19
Identity = 50/92 (54.35%), Postives = 58/92 (63.04%), Query Frame = 3
Query:   60 VGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 335
            +GGV  V    N+  +V+LARFAV EHNKK NS L+F            GTLY  T+E  EG  KKL+EAKVWEKPWM FKEL+EF  V  S
Sbjct:   47 LGGVEPV-GNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDAS 137          
BLAST of DY258260 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.205e-18
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 3
Query:   63 GGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSS 344
            GG+++V A  N+ ++  LARFAV+EHN+K N+ L F            GT+Y +T+E  +G  KKL+EAKVWEKPW  FK+L+EF  V +  S+
Sbjct:   42 GGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVEEGASA 135          
BLAST of DY258260 vs. ExPASy Swiss-Prot
Match: CYTA_HELAN (Cysteine proteinase inhibitor A OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.072e-17
Identity = 44/75 (58.67%), Postives = 49/75 (65.33%), Query Frame = 3
Query:  102 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 326
            EI  LARFAVDEHNKKQN+ L+F            G +Y ITLEA  GG KK +EAKVW KPW  FKEL+EF  V
Sbjct:    3 EIDELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKVWVKPWENFKELQEFKPV 77          
BLAST of DY258260 vs. ExPASy Swiss-Prot
Match: CYT1_ARATH (Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana GN=CYS1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.307e-16
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 3
Query:   42 QKTMATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFN 320
            Q+    VGGVR+++A AN+ ++ +LARFAVDEHNK +N  L++            GT++ +T+E  +G   K++EAKV EK W   K+L+ FN
Sbjct:    4 QQAGTIVGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVADGETNKVYEAKVLEKAWENLKQLESFN 96          
BLAST of DY258260 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15
Identity = 42/91 (46.15%), Postives = 54/91 (59.34%), Query Frame = 3
Query:   60 VGGVREVEATANNQ-EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVA 329
            +GGV++  A   N  E + LARFAV EHN K N+ L+F            G ++  T+E  EGG KKL+EAKVWEK W  FK+L+EF   A
Sbjct:   17 LGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKPAA 107          
BLAST of DY258260 vs. ExPASy Swiss-Prot
Match: CYT7_ARATH (Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.352e-15
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 3
Query:   99 QEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 335
            +EI ++A FAV EHN+++N+ L+             G LY +TLE +E G+KK++EAKVW KPWM FK+L+EF  +  S
Sbjct:   59 KEIDDIALFAVQEHNRRENAVLELARVLKATEQVVAGKLYRLTLEVIEAGEKKIYEAKVWVKPWMNFKQLQEFKNIIPS 137          
The following BLAST results are available for this feature:
BLAST of DY258260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYTI_VIGUN6.698e-2456.84Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]
CYT6_ARATH5.670e-2352.00Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYT3_ARATH3.440e-2052.69Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT12_ORYSJ1.001e-1943.64Cysteine proteinase inhibitor 12 OS=Oryza sativa s... [more]
CYT1_ORYSJ4.967e-1954.35Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT1_MAIZE4.205e-1845.74Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYTA_HELAN6.072e-1758.67Cysteine proteinase inhibitor A OS=Helianthus annu... [more]
CYT1_ARATH2.307e-1641.94Cysteine proteinase inhibitor 1 OS=Arabidopsis tha... [more]
CYT1_HORVU3.332e-1546.15Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT7_ARATH4.352e-1545.57Cysteine proteinase inhibitor 7 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3DE01ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258260 ID=DY258260; Name=DY258260; organism=Citrus clementina; type=EST; length=616bp
GAACTTAAAATCTTTCTCATCGCTTTATCATCAGACTTACGCAGAAAACA
ATGGCTACAGTAGGCGGTGTTCGTGAGGTTGAAGCAACAGCCAACAATCA
GGAGATCGTTAATCTCGCACGCTTCGCTGTGGATGAGCATAACAAGAAGC
AGAATTCAAATCTGCAATTTGTAAAAGTTGTAAGTGCGAAGCAGCAAGTG
GTTTCAGGGACTCTGTACGACATCACCTTGGAGGCTGTTGAAGGAGGTCA
GAAGAAACTTTTTGAAGCTAAGGTCTGGGAGAAGCCTTGGATGCAATTCA
AGGAGTTGAAAGAATTCAATACTGTGGCTCAGTCTCACTCCTCAACCGCT
TAGCTTGTGGTGACTGAAGATGACATCTACGTGTAGCTTGCAATGGATCA
AACAAAGAGACAGTATCAATAAGAATGGAGCTATAACCATGTTCAGAATA
TAAAAATAAATGTAACCGGATTTATGAGTTTGGTTCTTTAATCTTTTGCA
AGTTATGTGTCGATTATTTATGGTAGTAGCTGCAACTCAGCGCAACTTTT
ATAACTGTGTGAAAAATAATTGAAATGACCTTTGGTCTGTAATATATATA
CAAGATTAATCTCTTT
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