DY258292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258292 vs. ExPASy Swiss-Prot
Match: ATG4_MEDTR (Cysteine protease ATG4 OS=Medicago truncatula GN=ATG4 PE=3 SV=1) HSP 1 Score: 393.275 bits (1009), Expect = 1.663e-108 Identity = 211/372 (56.72%), Postives = 251/372 (67.47%), Query Frame = 3 Query: 6 FNSAFSVFETYSESSASEKKAVHNKSNGWTAAVKRLVTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPRYIPTLRVTLTFPKALA-SWVETWCLNYIVVCQR-KRYLPDPMNLS-WL*YWKDVQKP-TLPNQTNVLGPLPWIN*SP-LGKRFHCEEKNKFKYF 1106 F S FSV ETYSESS+SEKK VH++++GW AAV+++V+ GSMRR ERVLG RT +SSS DIWLLGVCHKI+Q F QDF SRILI+YRKGFD I DSK TSDV WGCMLRSSQMLVAQALLFH+LGR WRK + KP D+EY++IL LFGDSE + FSIHNLLQAGK YGLA GSWVGPYAMCR+WE LAR QR + G Q LPMAIYVVSGDEDGERGGAPVVCI+DA + C FS+G WTP+ +KVN RYIP L+ T FP++L + YI+ Q K + DP + + D Q+P T N+ +P + P L F+C +K+ F F Sbjct: 52 FTSGFSVDETYSESSSSEKKTVHSRNSGWAAAVRKVVSGGSMRRFQERVLGSCRTDVSSSDGDIWLLGVCHKISQHESTGDVDIRNVFAAFEQDFFSRILITYRKGFDAIEDSKYTSDVNWGCMLRSSQMLVAQALLFHKLGRSWRKTVDKPVDKEYIDILQLFGDSEAAAFSIHNLLQAGKGYGLAVGSWVGPYAMCRTWEVLARNQREKNEQGEQLLPMAIYVVSGDEDGERGGAPVVCIEDACKRCLEFSRGLVPWTPLLLLVPLVLGLDKVNLRYIPLLQSTFKFPQSLGILGGKPGASTYIIGVQNDKAFYLDPHEVKPVVNITGDTQEPNTSSYHCNISRHMPLDSIDPSLAIGFYCRDKDDFDDF 423
BLAST of DY258292 vs. ExPASy Swiss-Prot
Match: ATG4A_ARATH (Cysteine protease ATG4a OS=Arabidopsis thaliana GN=ATG4A PE=2 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 1.671e-92 Identity = 188/377 (49.87%), Postives = 245/377 (64.99%), Query Frame = 3 Query: 3 LFNSAFSVFETYSESSASEKKAVHNKSNGWTAAVKRL-VTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPRYIPTLRVTLTFPKALA-SWVETWCLNYIV-VCQRKRYLPDPMNLSWL*YWKDVQKPTLPNQT-----NVLGPLPWIN*SP-LGKRFHCEEKNKFKYF 1106 +F S+ SV + Y ESS S K V NGWTA VKR+ + +G++RR ERVLGP+RTG+ S+TSD+WLLGVC+KI+ DFSS+IL++YRKGF+P D+ TSDV WGCM+RSSQML AQALLFHRLGR W K + P ++EY+E L FGDSE S FSIHNL+ AG +YGLAAGSWVGPYA+CR+WE+LA +R +T Q+LPMA+++VSG EDGERGGAP++CI+DA++ C FSKGQ++WTPI + VNPRYIP+L T TFP+++ + YIV V + K + DP + + V K T T NVL +P + P L F+C +K+ F F Sbjct: 46 VFTSSSSVSQPYRESSTSGHKQVCTTRNGWTAFVKRVSMASGAIRRFQERVLGPNRTGLPSTTSDVWLLGVCYKISADENSGETDTGTVLAALQLDFSSKILMTYRKGFEPFRDTTYTSDVNWGCMIRSSQMLFAQALLFHRLGRAWTKKSELP-EQEYLETLEPFGDSEPSAFSIHNLIIAGASYGLAAGSWVGPYAICRAWESLACKKRKQTDSKNQTLPMAVHIVSGSEDGERGGAPILCIEDATKSCLEFSKGQSEWTPIILLVPLVLGLDSVNPRYIPSLVATFTFPQSVGILGGKPGASTYIVGVQEDKGFYLDPHEVQQV---VTVNKETPDVDTSSYHCNVLRYVPLESLDPSLALGFYCRDKDDFDDF 418
BLAST of DY258292 vs. ExPASy Swiss-Prot
Match: ATG4B_ORYSJ (Cysteine protease ATG4B OS=Oryza sativa subsp. japonica GN=ATG4B PE=2 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 4.108e-89 Identity = 161/296 (54.39%), Postives = 209/296 (70.61%), Query Frame = 3 Query: 3 LFNSAFSVFETYSESSASEKKAVHNKSNGWTAAVKRLVTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGL--GCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPRYIPTLRVTLTFPKAL 884 +FNS F++FE + +SSA++ + S W+ ++R+V +GSM R LG S+ ++SD+W LG C+K++ F +DFSSRI I+YR+GFD I DSK TSDV WGCM+RSSQMLVAQAL+FH LGR WR+PL+KP++ EY+ ILH+FGDSE FSIHNLLQAG +YGLAAGSWVGPYAMCR+W+ L R R + + G +S PMA+YVVSGDEDGERGGAPVVCID A++ C F+KGQ+ W+PI +K+NPRYIP L+ T TFP++L Sbjct: 48 VFNSPFNIFEAHQDSSANKSPKSSSGSYDWSRVLRRIVCSGSMWRF----LGTSKV---LTSSDVWFLGKCYKLSSEESSSDSDSESGHATFLEDFSSRIWITYRRGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHLGRSWRRPLEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAWQTLVRTNREQHEVVDGNESFPMALYVVSGDEDGERGGAPVVCIDVAAQLCCDFNKGQSTWSPILLLVPLVLGLDKINPRYIPLLKETFTFPQSL 336 HSP 2 Score: 22.7126 bits (47), Expect = 4.108e-89 Identity = 15/37 (40.54%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 872 PQSLGIVGGNLVPQLH-CGV-PEKALST*SHEPQLVI 976 PQSLGI+GG + GV ++AL HE Q+ + Sbjct: 333 PQSLGILGGKPGTSTYIAGVQDDRALYLDPHEVQMAV 369
BLAST of DY258292 vs. ExPASy Swiss-Prot
Match: ATG4B_ARATH (Cysteine protease ATG4b OS=Arabidopsis thaliana GN=ATG4B PE=1 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 5.032e-89 Identity = 179/371 (48.25%), Postives = 237/371 (63.88%), Query Frame = 3 Query: 12 SAFSVFETYSESSASEKKAVHNKSNGWTAAVKRL-VTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPRYIPTLRVTLTFPKALA-SWVETWCLNYIV-VCQRKRYLPDPMNLSWL*YWKDVQK--PTLPNQTNVLGPLPWIN*SP-LGKRFHCEEKNKFKYF 1106 S+ V + E+S S V + WT +K + +G++RR +RVLGPSRTGISSSTS+IWLLGVC+KI++ F QDFSS IL++YR+GF+PIGD+ TSDV WGCMLRS QML AQALLF RLGR WRK +P D +Y+EIL LFGD+E S FSIHNL+ AG++YGLAAGSWVGPYA+CRSWE+LAR + ET +S MA+++VSG EDGERGGAP++CI+D ++ C FS+G+ +W PI ++VNPRYIP+L T TFP++L + YIV V + K + DP ++ + K + T N L +P + P L F+C+ K+ F F Sbjct: 52 SSSPVSQLCREASTSGHNPVCTTHSSWTVILKTASMASGAIRRFQDRVLGPSRTGISSSTSEIWLLGVCYKISEGESSEEADAGRVLAAFRQDFSSLILMTYRRGFEPIGDTTYTSDVNWGCMLRSGQMLFAQALLFQRLGRSWRKKDSEPADEKYLEILELFGDTEASAFSIHNLILAGESYGLAAGSWVGPYAVCRSWESLARKNKEETDDKHKSFSMAVHIVSGSEDGERGGAPILCIEDVTKTCLEFSEGETEWPPILLLVPLVLGLDRVNPRYIPSLIATFTFPQSLGILGGKPGASTYIVGVQEDKGFYLDPHDVQQVVTVKKENQDVDTSSYHCNTLRYVPLESLDPSLALGFYCQHKDDFDDF 422
BLAST of DY258292 vs. ExPASy Swiss-Prot
Match: ATG4A_ORYSI (Cysteine protease ATG4A OS=Oryza sativa subsp. indica GN=ATG4A PE=3 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 2.497e-88 Identity = 164/296 (55.41%), Postives = 204/296 (68.92%), Query Frame = 3 Query: 3 LFNSAFSVFETYSESSASEKKAVHNKSNGWTAAVKRLVTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRA--ETGLGCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPRYIPTLRVTLTFPKAL 884 +F+S FS+FE + +SSA H+ S W+ ++R+ GSM R LG S+ + ++SD+W LG C+K++ F +DFSSRI I+YRKGFD I DSK TSDV WGCM+RSSQMLVAQAL+FH LGR WRKP QKP+ EY+ ILH+FGDSE FSIHNLLQAGK+YGLAAGSWVGPYAMCR+W+ L R R E G + PMA+YVVSGDEDGERGGAPVVCID A++ C F+KGQ+ W+PI +K+NPRYIP L+ T TFP++L Sbjct: 44 VFSSPFSIFEAHQDSSAHRPLKPHSGSYAWSRFLRRIACTGSMWRF----LGASK---ALTSSDVWFLGKCYKLSSEELSNSSDCESGNAAFLEDFSSRIWITYRKGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHLGRSWRKPSQKPYSPEYIGILHMFGDSEACAFSIHNLLQAGKSYGLAAGSWVGPYAMCRAWQTLVRTNREHHEAVDGNGNFPMALYVVSGDEDGERGGAPVVCIDVAAQLCCDFNKGQSTWSPILLLVPLVLGLDKLNPRYIPLLKETFTFPQSL 332
BLAST of DY258292 vs. ExPASy Swiss-Prot
Match: ATG4B_ORYSI (Cysteine protease ATG4B OS=Oryza sativa subsp. indica GN=ATG4B PE=1 SV=2) HSP 1 Score: 325.479 bits (833), Expect = 3.444e-88 Identity = 160/296 (54.05%), Postives = 207/296 (69.93%), Query Frame = 3 Query: 3 LFNSAFSVFETYSESSASEKKAVHNKSNGWTAAVKRLVTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGL--GCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPRYIPTLRVTLTFPKAL 884 +FNS F++FE + +SSA++ + S W ++R+V +GSM R LG S+ ++SD+W LG C+K++ F +DFSSRI I+YR+GFD I DSK TSDV WGCM+RSSQMLVAQAL+FH LGR WR+P +KP++ EY+ ILH+FGDSE FSIHNLLQAG +YGLAAGSWVGPYAMCR+W+ L R R + + G +S PMA+YVVSGDEDGERGGAPVVCID A++ C F+KGQ+ W+PI +K+NPRYIP L+ T TFP++L Sbjct: 48 VFNSPFNIFEAHQDSSANKSPKSSSGSYDWLRVLRRIVCSGSMWRF----LGTSKV---LTSSDVWFLGKCYKLSSEESSSDSDSESGHATFLEDFSSRIWITYRRGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHLGRSWRRPSEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAWQTLVRTNREQHEVVDGNESFPMALYVVSGDEDGERGGAPVVCIDVAAQLCCDFNKGQSTWSPILLLVPLVLGLDKINPRYIPLLKETFTFPQSL 336 HSP 2 Score: 22.7126 bits (47), Expect = 3.444e-88 Identity = 15/37 (40.54%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 872 PQSLGIVGGNLVPQLH-CGV-PEKALST*SHEPQLVI 976 PQSLGI+GG + GV ++AL HE Q+ + Sbjct: 333 PQSLGILGGKPGTSTYIAGVQDDRALYLDPHEVQMAV 369
BLAST of DY258292 vs. ExPASy Swiss-Prot
Match: ATG4A_ORYSJ (Cysteine protease ATG4A OS=Oryza sativa subsp. japonica GN=ATG4A PE=3 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 7.646e-88 Identity = 163/296 (55.07%), Postives = 204/296 (68.92%), Query Frame = 3 Query: 3 LFNSAFSVFETYSESSASEKKAVHNKSNGWTAAVKRLVTAGSMRRIHERVLGPSRTGISSSTSDIWLLGVCHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRA--ETGLGCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPRYIPTLRVTLTFPKAL 884 +F+S FS+FE + +SSA+ H+ S W+ ++R+ GSM R LG S+ + ++SD+W LG C+K++ F +DFSSRI I+YRKGFD I DSK TSDV WGCM+RSSQMLVAQAL+FH LGR WRKP QKP+ EY+ ILH+FGDSE FSIHNLLQAGK+YGLAAGSWVGPYAMCR+W+ L R E G + PMA+YVVSGDEDGERGGAPVVCID A++ C F+K Q+ W+PI +K+NPRYIP L+ TLTFP++L Sbjct: 45 VFSSPFSIFEAHQDSSANRSLKPHSGSYAWSRFLRRIACTGSMWRF----LGASK---ALTSSDVWFLGKCYKLSSEELSNSSDCESGNAAFLEDFSSRIWITYRKGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHLGRSWRKPSQKPYSPEYIGILHMFGDSEACAFSIHNLLQAGKSYGLAAGSWVGPYAMCRAWQTLVCTNREHHEAVDGNGNFPMALYVVSGDEDGERGGAPVVCIDVAAQLCCDFNKNQSTWSPILLLVPLVLGLDKLNPRYIPLLKETLTFPQSL 333 HSP 2 Score: 23.483 bits (49), Expect = 7.646e-88 Identity = 16/37 (43.24%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 872 PQSLGIVGGNLVPQLH-CGV-PEKALST*SHEPQLVI 976 PQSLGI+GG + GV ++AL HE QL + Sbjct: 330 PQSLGILGGKPGTSTYIAGVQDDRALYLDPHEVQLAV 366
BLAST of DY258292 vs. ExPASy Swiss-Prot
Match: ATG4A_MOUSE (Cysteine protease ATG4A OS=Mus musculus GN=Atg4a PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 5.304e-22 Identity = 66/223 (29.60%), Postives = 97/223 (43.50%), Query Frame = 3 Query: 285 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKGQAD---------------------WTPIXXXXXXXXXXEKVNPRYIPTLRVTLTFPKALAS 890 D S+R+ +YR+ F PIG + +SD GWGCMLR QM++AQAL+ LGR W QK +EY IL F D + +SIH + Q G G + G W GP + + + LA + +A+YV + V I+D + C V G AD W P+ ++NP Y+ + P++L + Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWERQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVIKKLALFDEWNS--------LAVYVSMDN---------TVVIEDIKKMCCVLPVGAADPAGDFLTASNQSRDTSVPCSAWKPLLLIVPLRLGINQINPVYVEAFKECFKMPQSLGA 253
BLAST of DY258292 vs. ExPASy Swiss-Prot
Match: ATG4B_BOVIN (Cysteine protease ATG4B OS=Bos taurus GN=ATG4B PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 8.571e-22 Identity = 75/223 (33.63%), Postives = 97/223 (43.50%), Query Frame = 3 Query: 285 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP---------YAMCRSWEALA-------RCQRAETGLGCQ-SLPMAIYVVSGDEDGERGGAPVVCIDDASRHCSVFSKG------QADWTPIXXXXXXXXXXEKVNPRYIPTLRVTLTFPKAL 884 D +SR+ +YRK F IG + TSD GWGCMLR QM+ AQAL+ LGR WR +K Y +L F D + S +SIH + Q G G + G W GP A+ +W ALA A+ C+ SLP A GA D+ RHC+ F G A W P+ VN Y TL+ P++L Sbjct: 45 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYCSVLQAFLDRKDSCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSALAVHVAMDNTVVMADIRRLCRSSLPCA-------------GAEAFPA-DSERHCNGFPAGAEGGGRAAPWRPLVLLIPLRLGLADVNAAYAGTLKHCFRMPQSL 253 HSP 2 Score: 24.2534 bits (51), Expect = 8.571e-22 Identity = 17/48 (35.42%), Postives = 23/48 (47.92%), Query Frame = 2 Query: 869 LPQSLGIVGG--NLVPQLHCGVPEKALST*SHEPQ-LVIILERCPKAD 1003 +PQSLG++GG N V E+ + H Q V +RCP D Sbjct: 249 MPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVAAADRCPVPD 296
BLAST of DY258292 vs. ExPASy Swiss-Prot
Match: ATG4A_HUMAN (Cysteine protease ATG4A OS=Homo sapiens GN=ATG4A PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.182e-21 Identity = 65/216 (30.09%), Postives = 99/216 (45.83%), Query Frame = 3 Query: 285 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGP---------YAMCRSWEALARCQRAETGLGCQSLPMAIYV--VSGDEDGERGGAPVVCIDDA---SRHCSVFSKGQADWTPIXXXXXXXXXXEKVNPRYIPTLRVTLTFPKALAS 890 D S+R+ +YR+ F PIG + +SD GWGCMLR QM++AQAL+ LGR W QK +EY IL F D + +SIH + Q G G + G W GP A+ W +LA + + + + V +S D G+R + + + S +CS W P+ ++NP Y+ + P++L + Sbjct: 48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRVLPLSADTAGDRPPDSLTASNQSKGTSAYCSA-------WKPLLLIVPLRLGINQINPVYVDAFKECFKMPQSLGA 256 The following BLAST results are available for this feature:
BLAST of DY258292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258292 ID=DY258292; Name=DY258292; organism=Citrus clementina; type=EST; length=1280bpback to top |