DY258311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258311 vs. ExPASy Swiss-Prot
Match: CCT14_ARATH (Cyclin-T1-4 OS=Arabidopsis thaliana GN=CYCT1-4 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.596e-20 Identity = 49/103 (47.57%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 2 PSDGDKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPXXXXXXXXXXXXXXXXHRPQKTPAAAEEQASKQTSSRSATEHSHPENNGASSRTAQNIKVMMNGAGK 310 PSDG+KVWWQEFDVTPRQLE+VSNQMLELYEQNRVP H P S+R EHS+ +N G S++ QN + NG+G+ Sbjct: 238 PSDGEKVWWQEFDVTPRQLEDVSNQMLELYEQNRVPASQVSEVESSVGGGSAHHVGSRP-----------SARLTHEHSNSDNLGGSTKATQN-RSNDNGSGE 328 HSP 2 Score: 33.113 bits (74), Expect = 1.596e-20 Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 1 Query: 283 QSNDEWSGEMGSVITDP--QADAETXDNQHHE 372 +SND SGE GSVIT+ + D ET D+ H E Sbjct: 320 RSNDNGSGEAGSVITEQKGERDTETKDSMHTE 351
BLAST of DY258311 vs. ExPASy Swiss-Prot
Match: CCT15_ARATH (Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 4.717e-19 Identity = 55/106 (51.89%), Postives = 65/106 (61.32%), Query Frame = 2 Query: 2 PSDGDKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPXXXXXXXXXXXXXXXXHRPQKTPAAA--EEQASKQTSS-RSATEHSHPENNGASSRTAQNIKVMMNGAGK 310 PSDG+KVWWQEFDVTPRQLE+VSNQMLELYEQNRVP RP A + E S+QTSS RS E S+ +N+G SS+ N + NG G+ Sbjct: 238 PSDGEKVWWQEFDVTPRQLEDVSNQMLELYEQNRVPASQGSEVESSVGGGSAQRPGSRNAVSTDEHVGSRQTSSVRSTHEQSNSDNHGGSSKGVLN-QNNENGGGE 342
BLAST of DY258311 vs. ExPASy Swiss-Prot
Match: CCT13_ORYSJ (Cyclin-T1-3 OS=Oryza sativa subsp. japonica GN=CYCT1-3 PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 5.766e-17 Identity = 48/105 (45.71%), Postives = 55/105 (52.38%), Query Frame = 2 Query: 2 PSDGDKVWWQEFDVTPRQLEEVSNQMLELYEQNRV---PXXXXXXXXXXXXXXXXHRPQKTPAAAEEQASKQ---------TSSRSATEHSHPENNGASSRTAQN 280 PSDG+KVWWQEFDVTPRQLEEVSNQMLELYEQNRV P K P ++EE + + T +H HPE +S R QN Sbjct: 242 PSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVAPPPSQGNDTEGSSASVVNQRASGKAPGSSEEPPTHENHLAPRQSSTPGHQGYDHPHPEKQNSSQRVPQN 346
BLAST of DY258311 vs. ExPASy Swiss-Prot
Match: CCT14_ORYSJ (Cyclin-T1-4 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.569e-14 Identity = 47/105 (44.76%), Postives = 55/105 (52.38%), Query Frame = 2 Query: 2 PSDGDKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPXXXXXXXXXXXXXXXXHRPQKTPAAAEE----QASKQTSSRSAT--------EHSHPENNGASSRTAQN 280 PSDG+KVWWQEFDVTPRQLEEVSNQMLELYEQN Q+ +EE SKQ+SS+ +T EHS+ E + QN Sbjct: 241 PSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNCAAQAQPSHGNEAEGSSASVPNQRVSVKSEETPLPHQSKQSSSQHSTGAPSHHGVEHSNLEKQTVDQKMLQN 345 The following BLAST results are available for this feature:
BLAST of DY258311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258311 ID=DY258311; Name=DY258311; organism=Citrus clementina; type=EST; length=597bpback to top |