DY258338

Overview
NameDY258338
Unique NameDY258338
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1269
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPBM_ORYSJ (ATP synthase subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=ATPB PE=1 SV=2)

HSP 1 Score: 320.857 bits (821), Expect = 2.266e-111
Identity = 163/211 (77.25%), Postives = 178/211 (84.36%), Query Frame = 3 
Query:  135 RASPYGHLLSRVSEYXXXXXXXXXXXXXXKSDVKKGGGGKITDEFTGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
            R SP G+L +R + Y               +  K  GGGKITDEFTG G++GQVCQVIGAVVDVRFDEGLPPILTALEV+DH++RLVLEVAQH+GE +VRTIAMDGTEGLVRGQRVLNTGSPITVPVGR TLGRIMNVIGEPIDEKGD+ T H+LPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGK  L+  L+
Sbjct:   32 RPSPSGYLFNRAAAYATAAAAKEAAPPAPATG-KATGGGKITDEFTGAGAVGQVCQVIGAVVDVRFDEGLPPILTALEVLDHNIRLVLEVAQHLGENMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRATLGRIMNVIGEPIDEKGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELI 241

HSP 2 Score: 104.375 bits (259), Expect = 2.266e-111
Identity = 72/142 (50.70%), Postives = 84/142 (59.15%), Query Frame = 2 
Query:  740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165
            KTVLIMELINNVAKAHGGFSVFAGVGERT EGNDLYR+M++ GVI LG++Q E + C L   +   P  A AR G   GL + + FR+AEG +    F    F F  TQ     +  LG  P   VGY        G L  R
Sbjct:  233 KTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQSESK-CALVYGQMNEPPGARARVGLT-GLTVAEHFRDAEG-QDVLLFIDNIFRF--TQANSEVSALLGRIPS-AVGYQPTLATDLGGLQER 368
[Close]
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPBM_MAIZE (ATP synthase subunit beta, mitochondrial OS=Zea mays GN=ATPB PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 4.228e-110
Identity = 163/211 (77.25%), Postives = 179/211 (84.83%), Query Frame = 3 
Query:  135 RASPYGHLLSRVSEYXXXXXXXXXXXXXXKSDVKKGGGGKITDEFTGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
            R SP G+L +R + Y               +   K GGGKITDEFTG G+IGQVCQVIGAVVDVRFDEGLPPILTALEV+D+++RLVLEVAQH+GE +VRTIAMDGTEGLVRGQRVLNTGSPITVPVGR TLGRI+NVIGEPIDEKGD+KT H+LPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGK  L+  L+
Sbjct:   33 RPSPAGYLFNRAAAYASSAAAQAAPATPPPA-TGKTGGGKITDEFTGAGAIGQVCQVIGAVVDVRFDEGLPPILTALEVLDNNIRLVLEVAQHLGENMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRATLGRIINVIGEPIDEKGDIKTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELI 242

HSP 2 Score: 101.679 bits (252), Expect = 4.228e-110
Identity = 71/142 (50.00%), Postives = 83/142 (58.45%), Query Frame = 2 
Query:  740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165
            KTVLIMELINNVAKAHGGFSVFAGVGERT EGNDLYR+M++ GVI L ++Q E + C L   +   P  A AR G   GL + + FR+AEG +    F    F F  TQ     +  LG  P   VGY        G L  R
Sbjct:  234 KTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLDDKQSESK-CALVYGQMNEPPGARARVGLT-GLTVAEHFRDAEG-QDVLLFIDNIFRF--TQANSEVSALLGRIPS-AVGYQPTLATDLGGLQER 369
[Close]
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPBM_NICPL (ATP synthase subunit beta, mitochondrial OS=Nicotiana plumbaginifolia GN=ATPB PE=1 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 2.504e-107
Identity = 161/214 (75.23%), Postives = 176/214 (82.24%), Query Frame = 3 
Query:  135 RASPYGHLLSRVSEYXXXXXXXXXXXXXXKSDVKKGGG---GKITDEFTGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
            RASP G LL+R  +Y               S   K G    GKITDEFTG GSIG+VCQVIGAVVDVRFDEGLPPILTALEV+D+ +RLVLEVAQH+GE +VRTIAMDGTEGLVRGQRVLNTGSPITVPVGR TLGRI+NVIGE IDE+G + T+H+LPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGK  L+  L+
Sbjct:   40 RASPKGFLLNRAVQYATSAAAPASQP----STPPKSGSEPSGKITDEFTGAGSIGKVCQVIGAVVDVRFDEGLPPILTALEVLDNQIRLVLEVAQHLGENMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRATLGRIINVIGEAIDERGPITTDHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELI 249

HSP 2 Score: 105.531 bits (262), Expect = 2.504e-107
Identity = 73/142 (51.41%), Postives = 84/142 (59.15%), Query Frame = 2 
Query:  740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165
            KTVLIMELINNVAKAHGGFSVFAGVGERT EGNDLYR+M++ GVI LGE+Q E + C L   +   P  A AR G   GL + + FR+AEG +    F    F F  TQ     +  LG  P   VGY        G L  R
Sbjct:  241 KTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESK-CALVYGQMNEPPGARARVGLT-GLTVAEHFRDAEG-QDVLLFIDNIFRF--TQANSEVSALLGRIPS-AVGYQPTLATDLGGLQER 376
[Close]
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPBN_ARATH (ATP synthase subunit beta-2, mitochondrial OS=Arabidopsis thaliana GN=At5g08690 PE=1 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.337e-99
Identity = 143/214 (66.82%), Postives = 169/214 (78.97%), Query Frame = 3 
Query:  132 RRASPYGHLLSRVSEYXXXXXXXXXXXXXXKSDVKKGGGGKITDEFTGKGSIGQVCQVIGAVVDVRFD--EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
            R A+P  +LL RV+EY               S       GK T ++ GKG+IG+VCQVIGA+VDVRF+  EGLPPI+T+LEV DH  RLVLEV+ H+G+ VVRTIAMDGTEGLVRG++VLNTG+PITVPVGR TLGRIMNV+GEPIDE+G++KTEHYLPIHR+APA V+ AT Q+IL TGIKVVDLLAPYQRGGKIGLFGGAGVGK  L+  L+
Sbjct:   36 RHAAPCSYLLGRVAEYATSSPASSAAP----SSAPAKDEGKKTYDYGGKGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELI 245

HSP 2 Score: 106.301 bits (264), Expect = 2.337e-99
Identity = 73/142 (51.41%), Postives = 85/142 (59.86%), Query Frame = 2 
Query:  740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165
            KTVLIMELINNVAKAHGGFSVFAGVGERT EGNDLYR+M++ GVI LGE+Q E + C L   +   P  A AR G   GL + + FR+AEG +    F    F F  TQ     +  LG  P   VGY        G+L  R
Sbjct:  237 KTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESK-CALVYGQMNEPPGARARVGLT-GLTVAEYFRDAEG-QDVLLFIDNIFRF--TQANSEVSALLGRIPS-AVGYQPTLASDLGALQER 372
[Close]
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPBM_ARATH (ATP synthase subunit beta-1, mitochondrial OS=Arabidopsis thaliana GN=At5g08670 PE=1 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.337e-99
Identity = 143/214 (66.82%), Postives = 169/214 (78.97%), Query Frame = 3 
Query:  132 RRASPYGHLLSRVSEYXXXXXXXXXXXXXXKSDVKKGGGGKITDEFTGKGSIGQVCQVIGAVVDVRFD--EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
            R A+P  +LL RV+EY               S       GK T ++ GKG+IG+VCQVIGA+VDVRF+  EGLPPI+T+LEV DH  RLVLEV+ H+G+ VVRTIAMDGTEGLVRG++VLNTG+PITVPVGR TLGRIMNV+GEPIDE+G++KTEHYLPIHR+APA V+ AT Q+IL TGIKVVDLLAPYQRGGKIGLFGGAGVGK  L+  L+
Sbjct:   36 RHAAPCSYLLGRVAEYATSSPASSAAP----SSAPAKDEGKKTYDYGGKGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELI 245

HSP 2 Score: 106.301 bits (264), Expect = 2.337e-99
Identity = 73/142 (51.41%), Postives = 85/142 (59.86%), Query Frame = 2 
Query:  740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165
            KTVLIMELINNVAKAHGGFSVFAGVGERT EGNDLYR+M++ GVI LGE+Q E + C L   +   P  A AR G   GL + + FR+AEG +    F    F F  TQ     +  LG  P   VGY        G+L  R
Sbjct:  237 KTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESK-CALVYGQMNEPPGARARVGLT-GLTVAEYFRDAEG-QDVLLFIDNIFRF--TQANSEVSALLGRIPS-AVGYQPTLASDLGALQER 372
[Close]
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPBO_ARATH (ATP synthase subunit beta-3, mitochondrial OS=Arabidopsis thaliana GN=At5g08680 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.189e-99
Identity = 143/212 (67.45%), Postives = 168/212 (79.25%), Query Frame = 3 
Query:  138 ASPYGHLLSRVSEYXXXXXXXXXXXXXXKSDVKKGGGGKITDEFTGKGSIGQVCQVIGAVVDVRFD--EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
            A+P G LL RV+EY               S       GK T ++ GKG+IG+VCQVIGA+VDVRF+  EGLPPI+T+LEV DH  RLVLEV+ H+G+ VVRTIAMDGTEGLVRG++VLNTG+PITVPVGR TLGRIMNV+GEPIDE+G++KTEHYLPIHR+APA V+ AT Q+IL TGIKVVDLLAPYQRGGKIGLFGGAGVGK  L+  L+
Sbjct:   41 AAPCGTLLGRVAEYSTSSPANSAAP----SSAPAKDEGKKTYDYGGKGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELI 248

HSP 2 Score: 106.301 bits (264), Expect = 5.189e-99
Identity = 73/142 (51.41%), Postives = 85/142 (59.86%), Query Frame = 2 
Query:  740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165
            KTVLIMELINNVAKAHGGFSVFAGVGERT EGNDLYR+M++ GVI LGE+Q E + C L   +   P  A AR G   GL + + FR+AEG +    F    F F  TQ     +  LG  P   VGY        G+L  R
Sbjct:  240 KTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESK-CALVYGQMNEPPGARARVGLT-GLTVAEYFRDAEG-QDVLLFIDNIFRF--TQANSEVSALLGRIPS-AVGYQPTLASDLGALQER 375
[Close]
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPBM_HEVBR (ATP synthase subunit beta, mitochondrial OS=Hevea brasiliensis GN=ATPB PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 1.352e-86
Identity = 169/259 (65.25%), Postives = 192/259 (74.13%), Query Frame = 3 
Query:  135 RASPYGHLLSRVSEYXXXXXXXXXXXXXXKSDVKKGGGGKITDEFTGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLLTMLQRLMVVSQFLLVLESVLLKGMTCTXXXXXXVLLT*GNSKANSKCA 911
            RASPYG+LL+R +EY                     GGGKITDEFTGKG+IGQVCQVIGAVVDVRFDEGLPPILT+LEV+DHS+RLVLEVAQHMGEG+VRTIAMDGTEGLVRGQRVLNTGSPITVPVGR        VIGEPIDE+GD+KT H+LPIHREAPAFV+QATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGK  L+  L+  + +          +     +G           ++  G+ +A+SKCA
Sbjct:   41 RASPYGYLLTRAAEYATSAAAAAPPQPPPAKPEGGKGGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTSLEVLDHSIRLVLEVAQHMGEGMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRANPWTYHEVIGEPIDERGDIKTSHFLPIHREAPAFVDQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQADSKCA 299
[Close]
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPBM_CHLRE (ATP synthase subunit beta, mitochondrial OS=Chlamydomonas reinhardtii GN=ATP2 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 9.004e-84
Identity = 118/160 (73.75%), Postives = 133/160 (83.12%), Query Frame = 3 
Query:  288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
            G V QVIG VVDVRFD  LP IL+ALEV  H+VRLVLEVAQHMG+  VR +AMD T+GLVRGQ+V+NTGSPI VPVGR TLGRIMNVIGEP+DE+G ++      IHREAP F EQ+TEQ+ILVTGIKVVDLLAPYQRGGKIGLFGGAGVGK  L+  L+
Sbjct:   38 GFVSQVIGPVVDVRFDGELPSILSALEVQGHNVRLVLEVAQHMGDNTVRCVAMDSTDGLVRGQKVVNTGSPIKVPVGRGTLGRIMNVIGEPVDEQGPIECSEVWSIHREAPEFTEQSTEQEILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELI 197

HSP 2 Score: 100.908 bits (250), Expect = 9.004e-84
Identity = 70/142 (49.30%), Postives = 83/142 (58.45%), Query Frame = 2 
Query:  740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEGAKRGGPFSQKFFPFPPTQIQKGFAFFLGPYPPWLVGYHTPRFGPTGSLGRR 1165
            KTVLIMELINNVAKAHGGFSVFAGVGERT EGNDLYR+M++ GVI LG+++GE + C L   +   P  A AR     GL + + FR+ EG +    F    F F  TQ     +  LG  P   VGY        G L  R
Sbjct:  189 KTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKRGESK-CTLVYGQMNEPPGARARVALT-GLTVAEYFRDVEG-QDVLLFVDNIFRF--TQANSEVSALLGRIPS-AVGYQPTLATDLGGLQER 324
[Close]
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_RAT (ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus GN=Atp5b PE=1 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 1.534e-80
Identity = 117/160 (73.12%), Postives = 135/160 (84.38%), Query Frame = 3 
Query:  288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
            GQ+  VIGAVVDV+FDEGLPPIL ALEV     RLVLEVAQH+GE  VRTIAMDGTEGLVRGQ+VL++G+PI +PVG  TLGRIMNVIGEPIDE+G +KT+ + PIH EAP F+E + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK  L+  L+
Sbjct:   61 GQIVAVIGAVVDVQFDEGLPPILNALEVQGRESRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 220

HSP 2 Score: 85.1149 bits (209), Expect = 1.534e-80
Identity = 51/91 (56.04%), Postives = 61/91 (67.03%), Query Frame = 2 
Query:  740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012
            KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GVINL +   +     L   +   P  A AR     GL + + FR+ EG
Sbjct:  212 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSK---VALVYGQMNEPPGARARVALT-GLTVAEYFRDQEG 298
[Close]
BLAST of DY258338 vs. ExPASy Swiss-Prot
Match: ATPB_MOUSE (ATP synthase subunit beta, mitochondrial OS=Mus musculus GN=Atp5b PE=1 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 4.440e-80
Identity = 116/160 (72.50%), Postives = 135/160 (84.38%), Query Frame = 3 
Query:  288 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKLCLLWNLL 767
            G++  VIGAVVDV+FDEGLPPIL ALEV     RLVLEVAQH+GE  VRTIAMDGTEGLVRGQ+VL++G+PI +PVG  TLGRIMNVIGEPIDE+G +KT+ + PIH EAP F+E + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGK  L+  L+
Sbjct:   61 GRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 220

HSP 2 Score: 85.1149 bits (209), Expect = 4.440e-80
Identity = 51/91 (56.04%), Postives = 61/91 (67.03%), Query Frame = 2 
Query:  740 KTVLIMELINNVAKAHGGFSVFAGVGERTPEGNDLYRKMMKRGVINLGEQQGEQQMCPLSKAKERSPLVALARGGPDWGLMLPKPFREAEG 1012
            KTVLIMELINNVAKAHGG+SVFAGVGERT EGNDLY +M++ GVINL +   +     L   +   P  A AR     GL + + FR+ EG
Sbjct:  212 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSK---VALVYGQMNEPPGARARVALT-GLTVAEYFRDQEG 298
The following BLAST results are available for this feature:
BLAST of DY258338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPBM_ORYSJ2.266e-11177.25ATP synthase subunit beta, mitochondrial OS=Oryza ... [more]
ATPBM_MAIZE4.228e-11077.25ATP synthase subunit beta, mitochondrial OS=Zea ma... [more]
ATPBM_NICPL2.504e-10775.23ATP synthase subunit beta, mitochondrial OS=Nicoti... [more]
ATPBN_ARATH2.337e-9966.82ATP synthase subunit beta-2, mitochondrial OS=Arab... [more]
ATPBM_ARATH2.337e-9966.82ATP synthase subunit beta-1, mitochondrial OS=Arab... [more]
ATPBO_ARATH5.189e-9967.45ATP synthase subunit beta-3, mitochondrial OS=Arab... [more]
ATPBM_HEVBR1.352e-8665.25ATP synthase subunit beta, mitochondrial OS=Hevea ... [more]
ATPBM_CHLRE9.004e-8473.75ATP synthase subunit beta, mitochondrial OS=Chlamy... [more]
ATPB_RAT1.534e-8073.13ATP synthase subunit beta, mitochondrial OS=Rattus... [more]
ATPB_MOUSE4.440e-8072.50ATP synthase subunit beta, mitochondrial OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA12FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258338 ID=DY258338; Name=DY258338; organism=Citrus clementina; type=EST; length=1269bp
TTCTCTCAACATTGAAGCCCTGACCAATGGCTTCACGTAGACTCCTATCA
TCTCTCCTTCGCTCATCTGTCCGCCGATCTCCCTCCAAATCTTCGTTTTC
TAACTCATCTGTGTTCTCTCCTGCCTCCACGCGCCGCGCGTCTCCTTATG
GGCACCTCCTCTCGCGCGTCTCAGAGTACGCGACCTCAGCAGCCGCCACT
GCCCCACCGGCACAGACTCCGAAGTCGGATGTAAAGAAAGGCGGCGGTGG
TAAAATCACCGATGAGTTTACTGGAAAGGGCTCGATCGGTCAGGTTTGTC
AGGTCATCGGTGCCGTCGTTGATGTCAGATTTGACGAGGGGTTGCCTCCG
ATTTTGACCGCGCTTGAAGTGGTAGATCACTCGGTTCGGTTAGTGCTTGA
GGTGGCTCAGCACATGGGTGAGGGTGTTGTTAGGACTATTGCTATGGATG
GAACTGAAGGGTTGGTTCGTGGCCAGCGCGTGCTCAATACTGGCTCTCCA
ATCACTGTACCTGTGGGGAGAGTTACTCTGGGTCGTATTATGAATGTCAT
TGGAGAGCCTATTGATGAGAAAGGCGATCTCAAAACTGAACATTACTTGC
CCATCCACAGAGAGGCTCCAGCATTCGTTGAACAGGCAACTGAACAACAG
ATTCTAGTCACTGGCATCAAGGTCGTTGATCTCCTTGCTCCATACCAAAG
AGGAGGGAAGATTGGGCTTTTTGGTGGTGCTGGTGTAGGAAAACTGTGCT
TATTATGGAACTTATTAACAATGTTGCAAAGGCTCATGGTGGTTTCTCAG
TTTTTGCTGGTGTTGGAGAGCGTACTCCTGAAGGGAATGACTTGTACAGG
AAAATGATGAAAAGGGGTGTTATTAACCTAGGGGAACAGCAAGGCGAACA
GCAAATGTGCCCCTTGTCTAAGGCCAAAGAAAGGAGCCCCCTGGTGGCCC
TGGCCCGGGGGGGTCCTGACTGGGGTTTAATGTTGCCCAAGCCCTTCCGG
GAAGCTGAAGGGGCCAAAAGGGGCGGCCCTTTCTCCCAAAAATTTTTTCC
TTTTCCCCCCACCCAAATCCAAAAGGGGTTCGCCTTTTTTTTGGGTCCTT
ACCCCCCTTGGCTTGTTGGGTATCACACCCCCAGGTTTGGGCCTACCGGG
TCTTTGGGGAGGCGCCCCCCCGGAAAAGCGTATACCCCAACCCCCCCCAA
AAAAAAAAGGGGTTCCCCCCCCCCCCTTTCTTTGTTAAAAAACACCCCTA
TTATTATTTTTTGTGTCCC
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