DY258347

Overview
NameDY258347
Unique NameDY258347
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length554
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14880 contig Ccv1_Contig14880:593..1146. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 1.074e-88
Identity = 159/184 (86.41%), Postives = 165/184 (89.67%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 552
            VR ATG GVMMNDRKSRFSING+PIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV TGLGAVWNTAKVE GSIVA+FGLGTV             SR+IGIDID KKFD AKNFGVTEFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAA
Sbjct:  118 VRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAA 301          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 1.074e-88
Identity = 159/184 (86.41%), Postives = 165/184 (89.67%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 552
            VR ATG GVMMNDRKSRFSING+PIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV TGLGAVWNTAKVE GSIVA+FGLGTV             SR+IGIDID KKFD AKNFGVTEFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAA
Sbjct:  118 VRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAA 301          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 321.627 bits (823), Expect = 1.552e-87
Identity = 154/184 (83.70%), Postives = 163/184 (88.59%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 552
            VR ATG G+MMNDRKSRFS+NG+PIYHFMGTSTFSQYTVVHDVSVAKIDP APLDKVCLLGCGVPTGLGAVWNTAKVEPGS VA+FGLGTV             SR+IGIDID KK++ AK FGV EFVNPKDHDKPIQ+V+VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA
Sbjct:  116 VRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 2.240e-86
Identity = 151/184 (82.07%), Postives = 162/184 (88.04%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 552
            VR ATG GVMM DRKSRFS+ G+PIYHFMGTSTFSQYTVVHDVSVAKI P APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVA+FGLGTV             SR+IGIDID  K+D AKNFGVTEF+NPKDH+KPIQQV++DLTDGGVDYSFEC+GNVSVMR+ALECCHKGWGTSVIVGVAA
Sbjct:  115 VRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFINPKDHEKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGTSVIVGVAA 298          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 3.822e-86
Identity = 156/184 (84.78%), Postives = 163/184 (88.59%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 552
            VR ATG GVMMND KSRFS+NG+PIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPTGLGAVWNTAKVE GS+VAVFGLGTV             SRVIGIDID KKFD AKNFGVTEFVNPK+HDKPIQQV+VDLTDGGVDYSFECIGNVS+MRAALEC  KGWGTSVIVGVAA
Sbjct:  118 VRSATGVGVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKEHDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVIVGVAA 301          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 2.847e-65
Identity = 116/183 (63.39%), Postives = 143/183 (78.14%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 549
            +R   G G ++ D+ SRF+  G+ ++HFMGTSTFS+YTVV D+S+AK++ +AP+DKVCLLGCG+ TG GA  NTAKVEPGS  AVFGLG V             +R+IGID++P KF+ AK FG TEFVNPKDH KPIQ+V+V++TDGGVDYSFECIGNV +MRAALE CHKGWG SVI+GVA
Sbjct:  116 IRITQGQG-LLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKDHSKPIQEVLVEMTDGGVDYSFECIGNVQIMRAALEACHKGWGESVIIGVA 297          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 243.432 bits (620), Expect = 5.370e-64
Identity = 119/184 (64.67%), Postives = 140/184 (76.09%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 552
            +R   G G +M D  SRF+  G+ I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA  NTAK+EPGS+ AVFGLG V             SR+IG+DI+  KF RAK FG TE +NP+D  KPIQ+V++++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAA
Sbjct:  114 IRVTQGKG-LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAA 296          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 7.013e-64
Identity = 113/183 (61.75%), Postives = 141/183 (77.05%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 549
            +R   G G +M D  SRF+  G+ ++HFMGTSTFS+YTVV D+S+A +DP+APLDKVCLLGCG+ TG GA  NTAKVEPGS  AVFGLG V             +R+IG+DI+P+KF +A  FG TE +NPKDH +P+Q+V+V++TDGGVDYSFECIGNV +MR+ALE CHKGWG SVI+GVA
Sbjct:  115 IRVTQGRG-LMPDNTSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAAIMGCKVAGATRIIGVDINPEKFGKAAEFGATECLNPKDHARPVQEVLVEMTDGGVDYSFECIGNVEIMRSALEACHKGWGESVIIGVA 296          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 3.481e-63
Identity = 118/184 (64.13%), Postives = 139/184 (75.54%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 552
            +R   G G +M D  SRF+  G+ I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCGV TG GA  NTAKVEPGS  A+FGLG V             SR+IG+DI+  KF +AK FG +E +NP+D  KPIQ+V++++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAA
Sbjct:  114 IRTTQGKG-LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCAIFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFAKAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAA 296          
BLAST of DY258347 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 239.195 bits (609), Expect = 1.013e-62
Identity = 119/183 (65.03%), Postives = 136/183 (74.32%), Query Frame = 1
Query:    1 VRGATGAGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 549
            +R   G G +M D  SRF+  G+ I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA  NTAKVEPGS  AVFGLG V             SR+I +DI+  KF RAK FG TE +NP+D  KPIQ+V+V+ TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVA
Sbjct:  114 IRVTQGKG-LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGGVGLAAIMGCKAAGASRIIAVDINKDKFARAKEFGATECINPQDFSKPIQEVLVEKTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVA 295          
The following BLAST results are available for this feature:
BLAST of DY258347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
ADHX_ORYSJ1.074e-8886.41Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI1.074e-8886.41Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ARATH1.552e-8783.70Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_PEA2.240e-8682.07Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_MAIZE3.822e-8684.78Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_SPAAU2.847e-6563.39Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_HUMAN5.370e-6464.67Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHH_GADMO7.013e-6461.75Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHX_HORSE3.481e-6364.13Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_RABIT1.013e-6265.03Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BB12FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258347 ID=DY258347; Name=DY258347; organism=Citrus clementina; type=EST; length=554bp
GTTAGGGGTGCCACTGGTGCTGGTGTCATGATGAATGACCGCAAGAGCCG
TTTCTCGATAAATGGACAGCCTATCTATCACTTCATGGGAACCTCAACAT
TTAGCCAGTACACAGTTGTGCATGATGTTAGTGTTGCAAAGATTGACCCA
CAAGCTCCTTTGGACAAAGTATGCCTTCTTGGCTGTGGTGTTCCTACTGG
TCTTGGAGCAGTTTGGAACACTGCAAAAGTAGAGCCGGGTTCTATAGTTG
CTGTTTTTGGCCTTGGGACTGTTGGCCTTGCTGTGGCAGAGGGTGCAAAG
GCAGCTGGAGCTTCACGTGTTATTGGTATAGATATTGACCCGAAAAAGTT
TGATAGAGCAAAGAATTTTGGAGTTACTGAATTTGTAAATCCCAAGGACC
ATGACAAACCCATTCAGCAGGTCGTTGTCGATCTCACGGATGGTGGTGTT
GACTATAGTTTTGAATGCATTGGCAATGTCTCTGTGATGAGGGCAGCTTT
GGAATGCTGTCACAAGGGCTGGGGAACATCAGTTATTGTGGGTGTTGCTG
CATC
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