DY258355

Overview
NameDY258355
Unique NameDY258355
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1332
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.857e-41
Identity = 117/281 (41.64%), Postives = 149/281 (53.02%), Query Frame = 1
Query:  157 PCTWSNVICDNSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQLFQALISIQLDSNNLSGQIPVPLLPIPKYNFPGKQPEPGKNSSHIPANLLDKISGSSKKPKNGILVRNCSRTYSFLFSKASYFFPWYGDTKKLQPVKHFANVPRETQPQKLAFGSPRKKTPWKEITLGPPKISTQQNV 999
            PCTWS VICD+ N V S+TLS MNFSGTL  ++G+L  L TLTLKGNGITGEIPE+ GNL+SLTSLDLE+N+L G+IP ++GNLKKLQFL  +   K+              +GT              +   L G           L+++ LDSN+LSGQIP  L  IPKYNF       G    H P       SG S KPK GI+    +     LF    + F    D  K      F +V  E   +++AFG   K+  W+E+ L     S ++NV
Sbjct:   58 PCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFL-TLSRNKL--------------NGT--------------IPESLTG--------LPNLLNLLLDSNSLSGQIPQSLFEIPKYNFTSNNLNCGGRQPH-PCVSAVAHSGDSSKPKTGIIAGVVAGVTVVLFGILLFLF--CKDRHKGYRRDVFVDVAGEVD-RRIAFGQ-LKRFAWRELQLATDNFS-EKNV 295          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.609e-19
Identity = 79/252 (31.35%), Postives = 116/252 (46.03%), Query Frame = 1
Query:  157 PCTWSNVICDNSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQLFQALISIQLDSNNLSGQIPVPLLPIPKYNFPGKQPEPGKNSSHIPANLLDKISGSSKKPKNGILVRNCSRTYSFLFSKASYFFPWYGDTKKLQPVKHFANVPRETQPQ 912
            PCTW +V C+N N+V  V L + + SG L P++G L+ L  L L  N ITG +P +LGNL++L SLDL  N   G IP SLG L KL+FL     +  + L   + + L +    + LDL              +  S+  +  F     I   +NNL    PV   P P    P   P P      IP  ++    G S     G +    +   + LF+  +  F W+   ++ +P + F +VP E  P+
Sbjct:   60 PCTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFL----RLNNNSLTGPIPMSLTNIMTLQVLDL----------SNNRLSGSVPDNGSFSLFTPISF-ANNLDLCGPVTSRPCP--GSPPFSPPP----PFIPPPIVPTPGGYS---ATGAIAGGVAAGAALLFAAPALAFAWW---RRRKPQEFFFDVPAEEDPE 284          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 3.407e-19
Identity = 80/252 (31.75%), Postives = 114/252 (45.24%), Query Frame = 1
Query:  157 PCTWSNVICDNSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQLFQALISIQLDSNNLSGQIPVPLLPIPKYNFPGKQPEPGKNSSHIPANLLDKISGSSKKPKNGILVRNCSRTYSFLFSKASYFFPWYGDTKKLQPVKHFANVPRETQPQ 912
            PCTW +V C+N N+V  V L +   SG L P++GVL+ L  L L  N ITG IP  LGNL++L SLDL  N   G IP SLG L KL+FL     +  + L   + + L + +  + LDL              +  S+  +  F     I   +NNL    PV   P P    P   P P       P      +S  S     G +    +   + LF+  +  F W+   ++ +P+  F +VP E  P+
Sbjct:   57 PCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFL----RLNNNSLTGSIPMSLTNITTLQVLDL----------SNNRLSGSVPDNGSFSLFTPISF-ANNLDLCGPVTSHPCP--GSPPFSPPP-------PFIQPPPVSTPSGYGITGAIAGGVAAGAALLFAAPAIAFAWW---RRRKPLDIFFDVPAEEDPE 281          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 7.591e-19
Identity = 82/262 (31.30%), Postives = 113/262 (43.13%), Query Frame = 1
Query:  157 PCTWSNVICDNSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQLFQALISIQLDSNNLSGQIPVP-----LLPIPKYN-----FPGKQPEPGKNSSHIPANLLDKISGSSKKPKNGILVRNCSRTYSFLFSKASYFFPWYGDTKKLQPVKHFANVPRETQPQ 912
            PCTW +V C++ N+V  V L + N SG L  ++G L  L  L L  N ITG IPE+LGNL+ L SLDL  N L G IP +LG LKKL+FL                L+  S SG     L  ++                       L  + L +N L+G IPV        PI   N      P   P P   +   PA       GS++    G +    +   + LF+  +    W+   ++ +P  HF +VP E  P+
Sbjct:   56 PCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFL---------------RLNNNSLSGEIPRSLTAVL----------------------TLQVLDLSNNPLTGDIPVNGSFSLFTPISFANTKLTPLPASPPPPISPTPPSPA-------GSNR--ITGAIAGGVAAGAALLFAVPAIALAWW---RRKKPQDHFFDVPAEEDPE 268          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.096e-17
Identity = 48/90 (53.33%), Postives = 56/90 (62.22%), Query Frame = 1
Query:  157 PCTWSNVICDNSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            PCTW +V C+  N V  V L +   SG L P++G L  L  L L  N ITGEIPEELG+L  L SLDL  N + G IP SLG L KL+FL
Sbjct:   63 PCTWFHVTCNPENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFL 152          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.432e-17
Identity = 47/90 (52.22%), Postives = 57/90 (63.33%), Query Frame = 1
Query:  157 PCTWSNVICDNSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            PC+W +V C+  N+V  + L S N SG L P++  L  L  L L  N ITGEIPEELG+L  L SLDL  N + G IP SLG L KL+FL
Sbjct:   58 PCSWFHVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFL 147          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 7.105e-17
Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 1
Query:  160 CTWSNVICDN-SNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            C+W  V CDN S +V S+ LSS+N  G + P IG LR L ++ L+GN + G+IP+E+GN +SL  LDL  N L G IP S+  LK+L+ L
Sbjct:   59 CSWRGVFCDNVSYSVVSLNLSSLNLGGEISPAIGDLRNLQSIDLQGNKLAGQIPDEIGNCASLVYLDLSENLLYGDIPFSISKLKQLETL 148          

HSP 2 Score: 68.5514 bits (166), Expect = 9.937e-11
Identity = 52/200 (26.00%), Postives = 90/200 (45.00%), Query Frame = 1
Query:  187 NSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQLFQ------ALISIQLDSNNLSGQIPVPLLPIPKYNFPGKQPEPGKNSSHIPANLLDKISGSSKKPK 768
            N  ++  + LSS NF G +P ++G +  L  L L GN  +G IP  LG+L  L  L+L  N L G++P   GNL+ +Q +     +  +LL           SG    +L  +      + ++++  + +H ++         L+++ +  NNLSG +P      P  NF    P     + ++  N +  I G   K +
Sbjct:  404 NLGSLTYLNLSSNNFKGKIPVELGHIINLDKLDLSGNNFSGSIPLTLGDLEHLLILNLSRNHLSGQLPAEFGNLRSIQMI----DVSFNLL-----------SGVIPTELGQLQN----LNSLILNNNKLHGKIPDQLTNCFTLVNLNVSFNNLSGIVP------PMKNFSRFAPASFVGNPYLCGNWVGSICGPLPKSR 578          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 7.855e-16
Identity = 69/215 (32.09%), Postives = 95/215 (44.19%), Query Frame = 1
Query:  157 PCTWSNVICDNSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQLFQALISIQLDSNNLSGQIPVPL--------LPIPKYNFPGKQPEPGKNSSHIPANLL--DKISGSSKKPKN 771
            PC W  + CD+S NVAS+  +    SG L P+IG L++L  L L  N  +G IP  LGN + L +LDL  N    KIP +L +LK+L+           L +Y+ FL     +G     LF I +                      L  + LD NNL+G IP  +        L +    F G  PE   NSS +    L  +K+ GS  +  N
Sbjct:   63 PCNWFGITCDDSKNVASLNFTRSRVSGQLGPEIGELKSLQILDLSTNNFSGTIPSTLGNCTKLATLDLSENGFSDKIPDTLDSLKRLEV----------LYLYINFL-----TGELPESLFRIPK----------------------LQVLYLDYNNLTGPIPQSIGDAKELVELSMYANQFSGNIPESIGNSSSLQILYLHRNKLVGSLPESLN 240          

HSP 2 Score: 75.0998 bits (183), Expect = 1.062e-12
Identity = 37/80 (46.25%), Postives = 55/80 (68.75%), Query Frame = 1
Query:  187 NSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            N +++ ++ + S N SGT+P  +G+L+ L+ L L  N ++G IP ELGN SSL  L L +N+LVG IP +LG L+KL+ L
Sbjct:  289 NCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESL 368          

HSP 3 Score: 68.5514 bits (166), Expect = 9.937e-11
Identity = 49/161 (30.43%), Postives = 75/161 (46.58%), Query Frame = 1
Query:  187 NSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL*VIPSIKISLLIYMVFLHLFS*SGTKSLDLFLIVEPGL*VKTILVGPSLIHSQLFQALISIQLDSNNLSGQIPVPLLPIPK 669
            N  N+ ++ LS   F G +PP +G   +L  L +    ++G IP  LG L +LT L+L  NRL G IP  LGN   L  L     +  + L+  +   L      +SL+LF         +    G   I     Q+L  + +  NNL+G++PV +  + K
Sbjct:  265 NCKNLLTLDLSYNEFEGGVPPALGNCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLL----KLNDNQLVGGIPSALGKLRKLESLELF---------ENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKK 412          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.286e-15
Identity = 44/90 (48.89%), Postives = 54/90 (60.00%), Query Frame = 1
Query:  157 PCTWSNVICDNSNNVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            PCTW+ V C +   V S+ ++S   SG L   IG L  L TL L+ N +TG IP ELG LS L +LDL  NR  G+IP SLG L  L +L
Sbjct:   67 PCTWNMVGCSSEGFVVSLEMASKGLSGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYL 156          
BLAST of DY258355 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.685e-15
Identity = 40/90 (44.44%), Postives = 60/90 (66.67%), Query Frame = 1
Query:  160 CTWSNVICDNSN-NVASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            C W  V C+N   NV ++ LS +N  G + P IG L++L ++ L+GN ++G+IP+E+G+ SSL +LDL  N L G IP S+  LK+L+ L
Sbjct:   56 CVWRGVSCENVTFNVVALNLSDLNLDGEISPAIGDLKSLLSIDLRGNRLSGQIPDEIGDCSSLQNLDLSFNELSGDIPFSISKLKQLEQL 145          

HSP 2 Score: 70.4774 bits (171), Expect = 2.615e-11
Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 1
Query:  199 VASVTLSSMNFSGTLPPKIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLENNRLVGKIPPSLGNLKKLQFL 426
            VA+++L     SG +P  IG+++ L+ L L GN ++G IP  LGNL+    L L +N+L G IPP LGN+ KL +L
Sbjct:  261 VATLSLQGNQLSGKIPSVIGLMQALAVLDLSGNLLSGSIPPILGNLTFTEKLYLHSNKLTGSIPPELGNMSKLHYL 336          
The following BLAST results are available for this feature:
BLAST of DY258355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
Y5129_ARATH1.857e-4141.64Probable LRR receptor-like serine/threonine-protei... [more]
SERK2_ARATH2.609e-1931.35Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK1_ARATH3.407e-1931.75Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
BAK1_ARATH7.591e-1931.30BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK4_ARATH1.096e-1753.33Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
SERK5_ARATH1.432e-1752.22Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
ERL1_ARATH7.105e-1748.89LRR receptor-like serine/threonine-protein kinase ... [more]
PEPR1_ARATH7.855e-1632.09Leucine-rich repeat receptor-like protein kinase P... [more]
Y5457_ARATH2.286e-1548.89Probable LRR receptor-like serine/threonine-protei... [more]
ERECT_ARATH8.685e-1544.44LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BC08FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258355 ID=DY258355; Name=DY258355; organism=Citrus clementina; type=EST; length=1332bp
AATGACTCACATCTTTGCCCGTGAATGTGTGAAAAGGAATTGCTTCCGTT
AATCCCAAACAATCAGATTAGCAAAGATATACTGTATTTGCCCTCCATTA
CTCCTTTGCGTGTCCCAAACAATCAACAAAAAGATTGAAATCAAAACCAA
GTTAATCCTTGCACTTGGTCAAATGTCATTTGTGATAATAGCAACAATGT
TGCCTCTGTAACATTGTCTTCCATGAACTTTTCTGGAACCTTGCCCCCAA
AAATAGGAGTTCTGAGGACTCTTTCAACACTCACATTAAAAGGAAATGGC
ATAACTGGTGAAATACCTGAAGAGCTTGGTAATCTTTCAAGCTTGACAAG
CTTGGACTTGGAAAACAATCGCTTAGTTGGAAAAATACCACCTTCCCTTG
GCAATCTTAAAAAGCTTCAGTTCTTGTAAGTGATTCCATCAATAAAAATT
TCACTTTTAATCTATATGGTTTTTCTTCACCTTTTTTCATGATCTGGCAC
CAAAAGTCTCGATTTGTTTTTGATCGTTGAACCAGGACTTTGAGTCAAAA
CAATTTTAGTGGGACCATCCCTGATTCACTCACAACTCTTTCAAGCTTTG
ATCAGTATTCAGCTGGATTCAAATAATCTCAGTGGTCAAATTCCCGTGCC
TTTGCTCCCAATCCCCAAATACAATTTCCCGGGAAAACAACCGGAACCGG
GGAAAAACTCCTCCCACATTCCTGCGAATCTACTAGACAAGATTTCCGGT
AGTTCCAAGAAGCCCAAAAATGGAATATTAGTTCGGAATTGTTCGAGGAC
TTATAGTTTCTTATTCTCGAAAGCCTCCTATTTTTTCCCGTGGTACGGGG
ACACAAAAAAGCTACAACCCGTGAAACATTTTGCAAATGTTCCACGGGAA
ACTCAACCCCAAAAACTCGCCTTTGGTTCACCTAGAAAAAAAACTCCCTG
GAAGGAAATTACTCTTGGTCCACCCAAAATTTCCACCCAACAAAATGTCC
CTTGGAACCCGAAGGTTTTTGAGCAAATTTATACAAAACACCCCCTGGCC
CAATGGCCCCCAACACTTCCTCTTAAACCCCAATTAACCTATTTTCTAAA
AACCCCCGGGGCCGACAAACCCTCGCCTTCCTCCCCCCTCTAATATTCAC
AAAAAATAAAGAGCTACTCCCCCCCCCCCCCAACCCCCCTTCACAAAAAC
ACAAATTACCATTCTCTCCACACACCACCCCCCCTCCCCGCCACCCCCTT
CTCCCGTGCCTGTCCCTTCCCCCTTCCTCCTCTCTCTCACAAAACTTTCC
GACACTCCTTTCGCACCCCCCATCTCCCACTC
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