DY258389

Overview
NameDY258389
Unique NameDY258389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1286
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.063e-39
Identity = 78/146 (53.42%), Postives = 96/146 (65.75%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDN-GTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRDF 883
            ++  TFA  +L  AT  F     LGEGGFG VY G +D+ G  VAVK L RN   G+REF+ EV MLS LHH NLV LIG C +G  R LVYE +  GS+E HLH +  ++  LDW  RMKIA GAA+GL +LH+ +NP V +RDF
Sbjct:   69 IAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDF 214          

HSP 2 Score: 37.7354 bits (86), Expect = 1.063e-39
Identity = 22/49 (44.90%), Postives = 29/49 (59.18%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG+AK        H+ST V+G + G C  +YA TG  T V+SDVY
Sbjct:  228 KLSDFGLAKLGPTGDKSHVSTRVMGTY-GYCAPEYAMTGQLT-VKSDVY 274          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.328e-36
Identity = 74/142 (52.11%), Postives = 89/142 (62.68%), Query Frame = 2
Query:  458 KTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEV-AVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            +TF   +L +AT  F S   LGEGGFG V+ G ++   +V A+K L RN   G REF+ EV  LS   H NLVKLIG C EG  R LVYE +  GS+E HLH +   + PLDW  RMKIA GAARGL YLH+   P V +RD
Sbjct:   89 QTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRD 230          

HSP 2 Score: 34.2686 bits (77), Expect = 2.328e-36
Identity = 20/49 (40.82%), Postives = 27/49 (55.10%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG+AK        H+ST V+G + G C   YA TG  T  +SD+Y
Sbjct:  245 KLSDFGLAKVGPSGDKTHVSTRVMGTY-GYCAPDYAMTGQLTF-KSDIY 291          

HSP 3 Score: 22.7126 bits (47), Expect = 2.328e-36
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 3
Query:  885 KASNGWLGDDFPPKVPQF 938
            K SN  LG+D+ PK+  F
Sbjct:  232 KCSNILLGEDYQPKLSDF 249          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 6.496e-36
Identity = 75/139 (53.96%), Postives = 94/139 (67.63%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            F L DLE AT +F+   +LGEGG+G VY G + NGTEVAVK L  N    ++EF  EVE +  + H+NLV+L+G CIEG  R LVYE V++G++E  LHG  +  G L WEARMKI  G A+ LAYLHE   P+V HRD
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRD 309          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 3.565e-34
Identity = 67/139 (48.20%), Postives = 94/139 (67.63%), Query Frame = 2
Query:  464 FALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            + L +LE AT     + ++GEGG+G VY G++ +GT+VAVK L  N    ++EF  EVE++ R+ H+NLV+L+G C+EG  R LVY+ V NG++E  +HG   +  PL W+ RM I LG A+GLAYLHE   P+V HRD
Sbjct:  142 YTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRD 280          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.956e-32
Identity = 70/144 (48.61%), Postives = 94/144 (65.28%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            L + +F+L  ++ AT  F S   +GEGGFG VY G + +GT +AVK L+  ++ G+REF+ E+ M+S LHH NLVKL G C+EG    LVYE V N S+   L G  + +  LDW  R KI +G ARGLAYLHE+S  ++ HRD
Sbjct:  607 LMIASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRD 750          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.374e-32
Identity = 70/154 (45.45%), Postives = 97/154 (62.99%), Query Frame = 2
Query:  452 SVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDN----------GTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRDF 883
            ++K F+LS+L+ AT  F    ++GEGGFGCV+ G +D           G  +AVK L +    G RE++AE+  L +L H NLVKLIG C+E   R LVYE +  GS+E+HL        PL W  R+++ALGAARGLA+LH ++ P+V +RDF
Sbjct:   52 NLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLH-NAQPQVIYRDF 204          

HSP 2 Score: 29.6462 bits (65), Expect = 2.374e-32
Identity = 18/49 (36.73%), Postives = 28/49 (57.14%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG+A+   +    H+ST V+G  +G    +Y  TG  + V+SDVY
Sbjct:  218 KLSDFGLARDGPMGDNSHVSTRVMGT-QGYAAPEYLATGHLS-VKSDVY 264          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.555e-32
Identity = 68/144 (47.22%), Postives = 93/144 (64.58%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            L   +F L  +++AT  F  +  +GEGGFG VY GV+ +G  +AVK L+  ++ G+REF+ E+ M+S L H NLVKL G CIEG+   LVYE + N S+   L G  + R  LDW  R KI +G A+GLAYLHE+S  ++ HRD
Sbjct:  652 LQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRD 795          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 3.336e-32
Identity = 67/144 (46.53%), Postives = 93/144 (64.58%), Query Frame = 2
Query:  449 LSVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            L   +F L  +++AT  F  +  +GEGGFG VY GV+ +G  +AVK L+  ++ G+REF+ E+ M+S L H NLVKL G CIEG+   LVYE + N S+   L G  + R  LDW  R K+ +G A+GLAYLHE+S  ++ HRD
Sbjct:  650 LQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRD 793          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.022e-32
Identity = 69/154 (44.81%), Postives = 97/154 (62.99%), Query Frame = 2
Query:  452 SVKTFALSDLEKATEKFSSKRILGEGGFGCVYHGVMDN----------GTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRDF 883
            ++K+F+ ++L+ AT  F    +LGEGGFGCV+ G +D           G  +AVK L ++   G +E++AEV  L +  HR+LVKLIG C+E   R LVYE +  GS+E+HL        PL W+ R+K+ALGAA+GLA+LH  S  RV +RDF
Sbjct:   52 NLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLH-SSETRVIYRDF 204          

HSP 2 Score: 30.8018 bits (68), Expect = 4.022e-32
Identity = 19/49 (38.78%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  925 KSPNFGVAKKNQLKAVHHISTPVLGNFRGRCPQKYARTGAFTLVESDVY 1071
            K  +FG+AK   +    H+ST V+G   G    +Y  TG  T  +SDVY
Sbjct:  218 KLSDFGLAKDGPIGDKSHVSTRVMGT-HGYAAPEYLATGHLT-TKSDVY 264          
BLAST of DY258389 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 4.358e-32
Identity = 72/138 (52.17%), Postives = 93/138 (67.39%), Query Frame = 2
Query:  467 ALSDLEKATEKFSSKRILGEGGFGCVYHGVMDNGTEVAVKLLTRNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGV*QNRGPLDWEARMKIALGAARGLAYLHEDSNPRVYHRD 880
            +L  LE+AT+ FS K  +G G FG VY+G M +G EVAVK+    + + +R+F+ EV +LSR+HHRNLV LIG C E   R LVYE +HNGS+  HLHG   +  PLDW  R++IA  AA+GL YLH   NP + HRD
Sbjct:  597 SLPVLEEATDNFSKK--VGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGS-SDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRD 731          
The following BLAST results are available for this feature:
BLAST of DY258389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 259
Match NameE-valueIdentityDescription
PBS1_ARATH1.063e-3953.42Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
RLCK7_ARATH2.328e-3652.11Probable serine/threonine-protein kinase RLCKVII O... [more]
Y2296_ARATH6.496e-3653.96Probable receptor-like protein kinase At2g42960 OS... [more]
Y1154_ARATH3.565e-3448.20Probable serine/threonine-protein kinase At1g01540... [more]
Y1534_ARATH1.956e-3248.61Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH2.374e-3245.45Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y5343_ARATH2.555e-3247.22Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH3.336e-3246.53Probable LRR receptor-like serine/threonine-protei... [more]
APK1A_ARATH4.022e-3244.81Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y1677_ARATH4.358e-3252.17Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1CA12FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258389 ID=DY258389; Name=DY258389; organism=Citrus clementina; type=EST; length=1286bp
GTTTGATAATACCACAGCAGTTCTGACATATGACAGACTGTGGCATAAGA
AAGTTCCTTTAAATTTGACTCTATTTGGTATTTATGAAGTCATTTATATC
AGCTATCCAGGTATTCCTTCTTCTCCGCCATATGAGAGTTCTACAGAGAG
TGGTCCAAGTGTTAGTGTTGGATCTCTCCCTTTCTCTGCAAACTTTGGAA
ATAAAAATCAGCGGATGAATTTCAGAACCATTGCTATCATTGCTTTGTCT
GCATTTGTACTCTTACTGGTTTTTGTTGGAGCAATATCCATCCTTATAAA
ATGGAGGAAGGCTAGAAAACCATCAAGTGCTGTTGGCCCTGCCTTTGCAT
CATCTATAAACAAAAGATCCGGCATTGGGTCTATCTTATCTAGTAGTATT
GCTAGCTCAACCTCAGTGTCGCTCATGTCCACCATGGCTACTTGTATCCT
CTCTGTTAAAACATTTGCACTTTCTGATCTTGAGAAGGCAACAGAGAAAT
TCAGTTCCAAGAGAATTTTGGGGGAAGGAGGTTTTGGGTGTGTTTACCAT
GGTGTTATGGACAATGGAACTGAAGTTGCAGTGAAGCTGCTAACAAGAAA
TAATCAGAATGGGGACCGTGAATTTATTGCAGAAGTAGAGATGCTAAGCA
GATTACATCATCGTAATCTCGTGAAATTGATCGGTATATGCATTGAAGGA
CGCACGCGCTGCTTGGTGTATGAACTTGTTCACAATGGCAGTGTTGAGTC
ACACCTGCATGGTGTTTGACAGAATAGAGGACCTCTTGACTGGGAAGCAC
GAATGAAGATTGCCCTTGGAGCAGCAAGAGGACTGGCCTATCTTCATGAA
GATTCTAATCCTCGTGTTTATCATAGAGATTTTTAAGGCCAGTAATGGAT
GGCTAGGAGATGACTTCCCCCCGAAAGTCCCCCAATTTTGGGGTGGCCAA
GAAAAACCAACTGAAGGCAGTCCACCATATTTCCACCCCGGTCCTGGGAA
ACTTTCGGGGAAGGTGCCCCCAAAAATATGCAAGGACCGGGGCCTTTACC
TTGGTAGAAAGTGATGTTTACCGCCTTTGGGGGTTTGGGCTGCTTTGACC
TTCTTCCCTGGGAAAAAAAACCCCTGGGGGGAAATTTCCCCCCCCCCCCC
GGGGGAAAGGGAAAAATCTTGGGGGGGCGTTGGGGGGCCCGCCCCCCCCC
CACGCGCCACCCCACCAAAAAGAAAAAGGGGTTTTGGGGAGGAGACAGGT
GGTTGGGGGGGGGGTTTCCCCCCTCTTCTCCTGTTG
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