DY258400

Overview
NameDY258400
Unique NameDY258400
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1341
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY258400_ssr185 microsatellite DY258400_ssr185:185..196. BLAST: Citrus ESTs to Prunus persica proteins V1
DY258400_ssr899 microsatellite DY258400_ssr899:899..910. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY258400 vs. ExPASy Swiss-Prot
Match: TSL_ARATH (Serine/threonine-protein kinase TOUSLED OS=Arabidopsis thaliana GN=TOUSLED PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 5.244e-60
Identity = 113/141 (80.14%), Postives = 124/141 (87.94%), Query Frame = 1
Query:  235 PENVLFEEFGAAKVTDFGLSKIQKDDVGSHSMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGTLFYQMLFGQRPFGHDQTQKRILREDTIIKTSKVEFP-SRPAGSNEAKD*IPRCLTYNQPDRPDV*TLLKTPY 654
            P NVLF+EFG AKVTDFGLSKI +D+VGS  MELTSQGAGTYWYLPPECFEL+KTP+ISSKVDVWS G LFYQMLFG+RPFGHDQ+Q+RILREDTIIK  KVEFP +RPA SNEAKD I RCLTYNQ DRPDV T+ + PY
Sbjct:  542 PGNVLFDEFGVAKVTDFGLSKIVEDNVGSQGMELTSQGAGTYWYLPPECFELNKTPMISSKVDVWSVGVLFYQMLFGKRPFGHDQSQERILREDTIIKAKKVEFPVTRPAISNEAKDLIRRCLTYNQEDRPDVLTMAQDPY 682          
BLAST of DY258400 vs. ExPASy Swiss-Prot
Match: TLK2_DANRE (Serine/threonine-protein kinase tousled-like 2 OS=Danio rerio GN=tlk2 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 1.485e-38
Identity = 80/133 (60.15%), Postives = 98/133 (73.68%), Query Frame = 1
Query:  262 GAAKVTDFGLSKIQKDD-VGSHSMELTSQGAGTYWYLPPECFELSKTP-LISSKVDVWSAGTLFYQMLFGQRPFGHDQTQKRILREDTIIKTSKVEFPSRPAGSNEAKD*IPRCLTYNQPDRPDV*TLLKTPY 654
            G  K+TDFGLSKI  DD  G   MELTSQGAGTYWYLPPECF + K P  IS+KVDVWS G +FYQ L+G++PFGH+Q+Q+ IL+E+TI+K ++V+FP +P  S EAK  I RCL Y + DR DV  L   PY
Sbjct:  533 GEIKITDFGLSKIMDDDNYGVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGKKPFGHNQSQQDILQENTILKATEVQFPPKPGVSPEAKAFIRRCLVYRKEDRIDVHQLASDPY 665          
BLAST of DY258400 vs. ExPASy Swiss-Prot
Match: TLK1B_DANRE (Serine/threonine-protein kinase tousled-like 1-B OS=Danio rerio GN=tlk1b PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.939e-38
Identity = 79/137 (57.66%), Postives = 102/137 (74.45%), Query Frame = 1
Query:  235 PENVLFEE---FGAAKVTDFGLSKIQKDD-VGSHSMELTSQGAGTYWYLPPECFELSKTP-LISSKVDVWSAGTLFYQMLFGQRPFGHDQTQKRILREDTIIKTSKVEFPSRPAGSNEAKD*IPRCLTYNQPDRPDV 630
            P N+L  +    G  K+TDFGLSKI  DD  G   M+LTSQGAGTYWYLPPECF + K P  IS+KVDVWS G +F+Q L+G++PFGH+Q+Q+ IL+E+TI+K ++V+FP++P  SNEAK  I RCL Y + DR DV
Sbjct:  583 PGNILLVDGTACGEIKITDFGLSKIMDDDSYGVDGMDLTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFFQCLYGRKPFGHNQSQQDILQENTILKATEVQFPAKPVASNEAKAFIRRCLAYRKEDRSDV 719          
BLAST of DY258400 vs. ExPASy Swiss-Prot
Match: TLK1_MOUSE (Serine/threonine-protein kinase tousled-like 1 OS=Mus musculus GN=Tlk1 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 4.320e-38
Identity = 81/145 (55.86%), Postives = 104/145 (71.72%), Query Frame = 1
Query:  235 PENVLFEE---FGAAKVTDFGLSKIQKDD-VGSHSMELTSQGAGTYWYLPPECFELSKTP-LISSKVDVWSAGTLFYQMLFGQRPFGHDQTQKRILREDTIIKTSKVEFPSRPAGSNEAKD*IPRCLTYNQPDRPDV*TLLKTPY 654
            P N+L  +    G  K+TDFGLSKI  DD  G   M+LTSQGAGTYWYLPPECF + K P  IS+KVDVWS G +F+Q L+G++PFGH+Q+Q+ IL+E+TI+K ++V+FP +P  S+EAK  I RCL Y + DR DV  L   PY
Sbjct:  589 PGNILLVDGTACGEIKITDFGLSKIMDDDSYGVDGMDLTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFFQCLYGRKPFGHNQSQQDILQENTILKATEVQFPVKPVVSSEAKAFIRRCLAYRKEDRFDVHQLANDPY 733          
BLAST of DY258400 vs. ExPASy Swiss-Prot
Match: TLK1_HUMAN (Serine/threonine-protein kinase tousled-like 1 OS=Homo sapiens GN=TLK1 PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 4.320e-38
Identity = 81/145 (55.86%), Postives = 104/145 (71.72%), Query Frame = 1
Query:  235 PENVLFEE---FGAAKVTDFGLSKIQKDD-VGSHSMELTSQGAGTYWYLPPECFELSKTP-LISSKVDVWSAGTLFYQMLFGQRPFGHDQTQKRILREDTIIKTSKVEFPSRPAGSNEAKD*IPRCLTYNQPDRPDV*TLLKTPY 654
            P N+L  +    G  K+TDFGLSKI  DD  G   M+LTSQGAGTYWYLPPECF + K P  IS+KVDVWS G +F+Q L+G++PFGH+Q+Q+ IL+E+TI+K ++V+FP +P  S+EAK  I RCL Y + DR DV  L   PY
Sbjct:  589 PGNILLVDGTACGEIKITDFGLSKIMDDDSYGVDGMDLTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFFQCLYGRKPFGHNQSQQDILQENTILKATEVQFPVKPVVSSEAKAFIRRCLAYRKEDRFDVHQLANDPY 733          
BLAST of DY258400 vs. ExPASy Swiss-Prot
Match: TLK2_XENTR (Serine/threonine-protein kinase tousled-like 2 OS=Xenopus tropicalis GN=tlk2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 6.238e-37
Identity = 78/134 (58.21%), Postives = 98/134 (73.13%), Query Frame = 1
Query:  262 GAAKVTDFGLSKIQKDDVGSH--SMELTSQGAGTYWYLPPECFELSKTP-LISSKVDVWSAGTLFYQMLFGQRPFGHDQTQKRILREDTIIKTSKVEFPSRPAGSNEAKD*IPRCLTYNQPDRPDV*TLLKTPY 654
            G  K+TDFGLSKI  DD  +    MELTSQGAGTYWYLPPECF + K P  IS+KVDVWS G +FYQ L+G++PFGH+Q+Q+ IL+E+TI+K ++V+FP +P  + EAK  I RCL Y + DR DV  L   PY
Sbjct:  532 GEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVTPEAKAFIRRCLAYRKEDRIDVQQLACDPY 665          
BLAST of DY258400 vs. ExPASy Swiss-Prot
Match: TLK2_MOUSE (Serine/threonine-protein kinase tousled-like 2 OS=Mus musculus GN=Tlk2 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 6.238e-37
Identity = 78/134 (58.21%), Postives = 98/134 (73.13%), Query Frame = 1
Query:  262 GAAKVTDFGLSKIQKDDVGSH--SMELTSQGAGTYWYLPPECFELSKTP-LISSKVDVWSAGTLFYQMLFGQRPFGHDQTQKRILREDTIIKTSKVEFPSRPAGSNEAKD*IPRCLTYNQPDRPDV*TLLKTPY 654
            G  K+TDFGLSKI  DD  +    MELTSQGAGTYWYLPPECF + K P  IS+KVDVWS G +FYQ L+G++PFGH+Q+Q+ IL+E+TI+K ++V+FP +P  + EAK  I RCL Y + DR DV  L   PY
Sbjct:  553 GEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVTPEAKAFIRRCLAYRKEDRIDVQQLACDPY 686          
BLAST of DY258400 vs. ExPASy Swiss-Prot
Match: TLK2_HUMAN (Serine/threonine-protein kinase tousled-like 2 OS=Homo sapiens GN=TLK2 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 6.238e-37
Identity = 78/134 (58.21%), Postives = 98/134 (73.13%), Query Frame = 1
Query:  262 GAAKVTDFGLSKIQKDDVGSH--SMELTSQGAGTYWYLPPECFELSKTP-LISSKVDVWSAGTLFYQMLFGQRPFGHDQTQKRILREDTIIKTSKVEFPSRPAGSNEAKD*IPRCLTYNQPDRPDV*TLLKTPY 654
            G  K+TDFGLSKI  DD  +    MELTSQGAGTYWYLPPECF + K P  IS+KVDVWS G +FYQ L+G++PFGH+Q+Q+ IL+E+TI+K ++V+FP +P  + EAK  I RCL Y + DR DV  L   PY
Sbjct:  607 GEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVTPEAKAFIRRCLAYRKEDRIDVQQLACDPY 740          
BLAST of DY258400 vs. ExPASy Swiss-Prot
Match: TLK1_CAEEL (Serine/threonine-protein kinase tousled-like 1 OS=Caenorhabditis elegans GN=tlk-1 PE=1 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 4.184e-33
Identity = 75/142 (52.82%), Postives = 96/142 (67.61%), Query Frame = 1
Query:  235 PENVLFEE---FGAAKVTDFGLSKIQKDDVGSHSM--ELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGTLFYQMLFGQRPFGHDQTQKRILREDTIIKTSKVEFPSRPAGSNEAKD*IPRCLTYNQPDRPDV*TLLK 645
            P N+L E     GA K+TDFGLSKI + +   H +  ELTSQ AGTYWYLPPE F +   P I+ KVDVWS G +FYQ ++G++PFG+D TQ++IL  +TII   +V FPS+P  S+ A+D I RCL Y + DR DV  L K
Sbjct:  784 PANILLESGNTSGAIKITDFGLSKIMEGESDDHDLGIELTSQFAGTYWYLPPETF-IVPPPKITCKVDVWSIGVIFYQCIYGKKPFGNDLTQQKILEYNTIINAREVSFPSKPQVSSAAQDFIRRCLQYRKEDRADVFELAK 924          
BLAST of DY258400 vs. ExPASy Swiss-Prot
Match: STK6L_XENLA (Serine/threonine-protein kinase Eg2-like OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 7.679e-11
Identity = 52/140 (37.14%), Postives = 69/140 (49.29%), Query Frame = 1
Query:  235 PENVLFEEFGAAKVTDFGLSKIQKDDVGSHSMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGTLFYQMLFGQRPFGHDQTQKRILREDTIIKTSKVEFPSRPAGSNEAKD*IPRCLTYNQPDRPDV*TLLKTPY 654
            PEN+L    G  K+ DFG S      V + S   T+   GT  YLPPE  E     +   KVD+WS G L Y+ L G+ PF  D  Q      +T  + SKVEF   P  S EAKD + + L +N   R  +  +L+ P+
Sbjct:  266 PENLLLGSNGELKIADFGWS------VHAPSSRRTTL-CGTLDYLPPEMIE---GRMHDEKVDLWSLGVLCYEFLVGKPPFETDTHQ------ETYRRISKVEFQYPPYVSEEAKDLVSKLLKHNPNHRLPLKGVLEHPW 389          
The following BLAST results are available for this feature:
BLAST of DY258400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
TSL_ARATH5.244e-6080.14Serine/threonine-protein kinase TOUSLED OS=Arabido... [more]
TLK2_DANRE1.485e-3860.15Serine/threonine-protein kinase tousled-like 2 OS=... [more]
TLK1B_DANRE1.939e-3857.66Serine/threonine-protein kinase tousled-like 1-B O... [more]
TLK1_MOUSE4.320e-3855.86Serine/threonine-protein kinase tousled-like 1 OS=... [more]
TLK1_HUMAN4.320e-3855.86Serine/threonine-protein kinase tousled-like 1 OS=... [more]
TLK2_XENTR6.238e-3758.21Serine/threonine-protein kinase tousled-like 2 OS=... [more]
TLK2_MOUSE6.238e-3758.21Serine/threonine-protein kinase tousled-like 2 OS=... [more]
TLK2_HUMAN6.238e-3758.21Serine/threonine-protein kinase tousled-like 2 OS=... [more]
TLK1_CAEEL4.184e-3352.82Serine/threonine-protein kinase tousled-like 1 OS=... [more]
STK6L_XENLA7.679e-1137.14Serine/threonine-protein kinase Eg2-like OS=Xenopu... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI1CC06FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258400 ID=DY258400; Name=DY258400; organism=Citrus clementina; type=EST; length=1341bp
GGACATTCTCTTGTTAACTTTTTCCCCTCAATTTTTAGGAGCGTTCAAGT
AAATGCATAAATGATTATTGAAAAAAAAAAAAAAAAAAAAGAAAAAAAAC
AAAAAAACTGAACAAAAAACAAAACAATGAGTAGCCAAAAAAGAAAAAAA
AAAAAAAACAATGATCAAGATAATTACAAGAACTTAAATAAATAAAAAAA
AAAAAAAAAAAAGATTATCCATTATAATCTGAAACCTGAAAATGTCCTAT
TTGAAGAATTTGGTGCAGCAAAAGTGACTGATTTTGGGCTTAGCAAGATA
CAAAAGGACGATGTTGGATCCCACAGTATGGAACTTACATCCCAAGGAGC
TGGAACGTATTGGTACCTGCCCCCAGAGTGCTTTGAGCTCAGCAAGACTC
CACTTATTTCATCAAAGGTGGATGTTTGGTCTGCTGGTACTCTATTTTAC
CAAATGCTCTTTGGTCAACGTCCTTTTGGGCATGATCAAACCCAAAAACG
AATACTACGTGAGGACACAATTATCAAAACAAGTAAAGTTGAATTCCCTT
CAAGACCTGCTGGCTCCAATGAGGCAAAGGATTAAATTCCAAGATGTCTA
ACCTACAACCAGCCTGACAGGCCAGATGTGTAAACTCTTCTCAAGACCCC
CTATCAACATACTCCAACAATTAATAGTTAAATATTTATTCTAAAGACAC
CCACACTAATGGATCCCCACCATGAACGGGGAAAATTTCCTTTTAGAAAA
ACATAAAATTGCACACCACCATATCGCACCCCCCACCTGCAATTTTTAAA
AAAAAAAAAAAAAAAAAACAAACACACCCCTACTTCCTTTAAAAAATTTG
CGACTCTTAACCATTAATTCCCTTTTACTTTGTTCCAACAAAACTGCCCC
CACCCACCCAAAATAAAATCAACAAATTCCCCCTCCCCACCAAAATTCCA
TATAATAGACCACTTCACAGGTCCCCAATCTCTCTTCAGGCCCCACCCGT
CCCGCCACCCCACAATATACCATTGTCCATCACAACAAAAAAAAAAATAT
ACCACCACCGGAAAAAAAAAACCACACTACACACACCACAACAACTTTCT
ATTTTTCCTCTCATAACAATCCTTAAAACTCCTATCATATCTTAACACAT
CCCCCTATTTAAAAAAGCAATAAACACCAAACACCCCCTCCAACCCAGCA
CCTATCCCCAAACAAACATAATCACTCACACCCACTGCACACTCCTGATG
CGACTCACACACTACCACAAATATACTACTCACACAACACCAAACAATAC
CACCTCACATCATAAATCTCTTTCTACTCTTTCCTTTCCAA
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