DY258515

Overview
NameDY258515
Unique NameDY258515
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1287
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY258515_ssr820 microsatellite DY258515_ssr820:820..834. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CL2_SOYBN (4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2)

HSP 1 Score: 372.859 bits (956), Expect = 5.559e-123
Identity = 185/229 (80.79%), Postives = 202/229 (88.21%), Query Frame = 3
Query:    3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTGASL 689
            +D PPENCLHF+VLSEA+E  +PEV I PDD VA+PFSSGTTGLPKGV+LTHKSL TSVAQQVDGENPNLYLT  DV+LCVLPLFHI+SLNSVLLC+LRAG+ VLLMQKFEIG LLELIQRHRVS             KNPMVAD+DLSSIR+VLSGAAPLGKELE+ALR+R+PQA+LGQGYGMTEAGPVLSMCLGFAKQPF TKSGSCGTVVRNAELKV+DP TG SL
Sbjct:  170 VDDPPENCLHFSVLSEANESDVPEVEIHPDDAVAMPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMQKFEIGTLLELIQRHRVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEEALRNRMPQAVLGQGYGMTEAGPVLSMCLGFAKQPFQTKSGSCGTVVRNAELKVVDPETGRSL 398          

HSP 2 Score: 91.2781 bits (225), Expect = 5.559e-123
Identity = 52/108 (48.15%), Postives = 63/108 (58.33%), Query Frame = 2
Query:  692 HNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFVFPTIG 1015
            +NQPGEICIRG QIMKGYLND  ATA+TID EGWL TGD+                 +IK+KG Q     +L+    SH  +      PQK+  AG+VPVAFV  + G
Sbjct:  400 YNQPGEICIRGQQIMKGYLNDEAATASTIDSEGWLHTGDVGYVDDDDEIFIVDRVKELIKYKGFQ-VPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNG 506          
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 6.894e-112
Identity = 161/230 (70.00%), Postives = 192/230 (83.48%), Query Frame = 3
Query:    3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTGASLP 692
            ID+ PE CLHF+VL++A+E  IPEV I+PDD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGENPNLY+ + DV+LCVLPLFHIYSLNSVLLC LR GA +L+MQKF+I + LELIQR++V+             K+PMV DYDLSS+R V+SGAAPLGKELED +R++ P A LGQGYGMTEAGPVL+MCL FAK+PF  KSG+CGTVVRNAE+K++DP TG SLP
Sbjct:  152 IDSAPEGCLHFSVLTQANEHDIPEVEIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIHSEDVMLCVLPLFHIYSLNSVLLCGLRVGAAILIMQKFDIVSFLELIQRYKVTIGPFVPPIVLAIAKSPMVDDYDLSSVRTVMSGAAPLGKELEDTVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPKTGNSLP 381          

HSP 2 Score: 93.5893 bits (231), Expect = 6.894e-112
Identity = 53/107 (49.53%), Postives = 63/107 (58.88%), Query Frame = 2
Query:  695 NQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFVFPTIG 1015
            NQ GEICIRG QIMKGYLNDPEATA TID EGWL TGD+                 +IK+KG Q A   +L+    +H  +      P K+E AG+VPVAFV  + G
Sbjct:  383 NQSGEICIRGDQIMKGYLNDPEATARTIDKEGWLYTGDIGYIDDDDELFIVDRLKELIKYKGFQVA-PAELEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNG 488          
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CL2_ORYSJ (Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2)

HSP 1 Score: 323.168 bits (827), Expect = 1.173e-111
Identity = 162/229 (70.74%), Postives = 188/229 (82.10%), Query Frame = 3
Query:    6 DAPPENCLHF-TVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTGASL 689
            +A PE CL F  ++++ADE  +PEVAI PDDPVALPFSSGTTGLPKGVVLTH+S+++ VAQQVDGENPNL++  GDV LCVLPLFHI+SLNSVLLC++RAGA V LM +FE+GA+L  I+R RV+             KNP V  +DLSSIR+VLSGAAPLGKELEDALR+R+PQAI GQGYGMTEAGPVLSMC  FAK+P P KSGSCGTVVRNAELKV+DP TG SL
Sbjct:  182 EATPEGCLPFWDLIADADEGSVPEVAISPDDPVALPFSSGTTGLPKGVVLTHRSVVSGVAQQVDGENPNLHMGAGDVALCVLPLFHIFSLNSVLLCAVRAGAAVALMPRFEMGAMLGAIERWRVTVAAVVPPLVLALAKNPFVERHDLSSIRIVLSGAAPLGKELEDALRARLPQAIFGQGYGMTEAGPVLSMCPAFAKEPTPAKSGSCGTVVRNAELKVVDPDTGFSL 410          

HSP 2 Score: 103.219 bits (256), Expect = 1.173e-111
Identity = 56/102 (54.90%), Postives = 65/102 (63.73%), Query Frame = 2
Query:  695 NQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFV 1000
            N PGEICIRGPQIMKGYLNDPEATAATIDVEGWL TGD+                 +IKFKG Q     +L+    +H  +      PQK++VAG+VPVAFV
Sbjct:  413 NLPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQ-VPPAELESLLIAHPSIADAAVVPQKDDVAGEVPVAFV 513          
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 7.556e-111
Identity = 156/230 (67.83%), Postives = 190/230 (82.61%), Query Frame = 3
Query:    3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTGASLP 692
            ID+ PE CLHF+ L+++DE +IPEV I+PDD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGEN NLY+ + DV++CVLPLFHIYSLNS+LLC LR GA +L+MQKF+I   LELIQ+++VS             K+P+V  YDLSS+R V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+PF  KSG+CGTVVRNAE+K++DP TG SLP
Sbjct:  157 IDSAPEGCLHFSELTQSDEHEIPEVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSEDVLMCVLPLFHIYSLNSILLCGLRVGAAILIMQKFDIAPFLELIQKYKVSIGPFVPPIVLAIAKSPIVDSYDLSSVRTVMSGAAPLGKELEDAVRTKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLP 386          

HSP 2 Score: 96.2857 bits (238), Expect = 7.556e-111
Identity = 54/116 (46.55%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  668 PXNWCLPSHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFVFPTIG 1015
            P   C    NQPGEICIRG QIMKGYLNDPEAT  TID EGWL TGD+                 +IK+KG Q A   +++    +H  +      P K+E AG+VPVAFV  + G
Sbjct:  379 PDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATTRTIDKEGWLHTGDIGFIDEDDELFIVDRLKELIKYKGFQVA-PAEIEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNG 493          
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CL_PINTA (4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.857e-110
Identity = 156/229 (68.12%), Postives = 185/229 (80.79%), Query Frame = 3
Query:    6 DAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTGASLP 692
            DAP E C H +VL+EADE Q P V I PDD VALP+SSGTTGLPKGV+LTHK L++SVAQQVDGENPNLY  + DV+LCVLPLFHIYSLNSVLLC+LRAGA  L+MQKF +   LELIQ+++V+             K+P+V+ YD+SS+R+++SGAAPLGKELEDALR R P+AI GQGYGMTEAGPVL+M L FAK PFP KSGSCGTVVRNA++K++D  TG SLP
Sbjct:  153 DAPKEGCQHISVLTEADETQCPAVKIHPDDVVALPYSSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSDDVILCVLPLFHIYSLNSVLLCALRAGAATLIMQKFNLTTCLELIQKYKVTVAPIVPPIVLDITKSPIVSQYDVSSVRIIMSGAAPLGKELEDALRERFPKAIFGQGYGMTEAGPVLAMNLAFAKNPFPVKSGSCGTVVRNAQIKILDTETGESLP 381          

HSP 2 Score: 99.7525 bits (247), Expect = 2.857e-110
Identity = 54/103 (52.43%), Postives = 65/103 (63.11%), Query Frame = 2
Query:  692 HNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFV 1000
            HNQ GEICIRGP+IMKGY+NDPE+TAATID EGWL TGD+                 IIK+KG Q A   +L+    +H  +      PQK+E AG+VPVAFV
Sbjct:  382 HNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHTGDVEYIDDDEEIFIVDRVKEIIKYKGFQVA-PAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFV 483          
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 2.400e-109
Identity = 153/230 (66.52%), Postives = 190/230 (82.61%), Query Frame = 3
Query:    3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTGASLP 692
            +D+ PE C+HF+ L ++DE +IP+V I+PDD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGEN NLY+ + DV++CVLPLFHIYSLNSVLLC+LR GA +L+MQKF+I   LELI +H+V+             K+P+V +YDLSS+R V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+PF  KSG+CGTVVRNAE+K++DP TG SLP
Sbjct:  155 VDSAPEGCVHFSELIQSDEHEIPDVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSDDVLMCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIAQFLELIPKHKVTIGPFVPPIVLAIAKSPLVHNYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLP 384          

HSP 2 Score: 94.3597 bits (233), Expect = 2.400e-109
Identity = 54/116 (46.55%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  668 PXNWCLPSHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFVFPTIG 1015
            P   C    NQPGEICIRG QIMKGYLNDPEATA TI+ EGWL TGD+                 +IK+KG Q A   +L+    +H  +      P  +E AG+VPVAFV  + G
Sbjct:  377 PDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVA-PAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNG 491          
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 3.131e-109
Identity = 153/230 (66.52%), Postives = 190/230 (82.61%), Query Frame = 3
Query:    3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTGASLP 692
            +D+ PE C+HF+ L ++DE +IP+V I+PDD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGEN NLY+ + DV++CVLPLFHIYSLNSVLLC+LR GA +L+MQKF+I   LELI +H+V+             K+P+V +YDLSS+R V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+PF  KSG+CGTVVRNAE+K++DP TG SLP
Sbjct:  155 VDSVPEGCVHFSELIQSDEHEIPDVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSDDVLMCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIAQFLELIPKHKVTIGPFVPPIVLAIAKSPLVDNYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLP 384          

HSP 2 Score: 94.3597 bits (233), Expect = 3.131e-109
Identity = 54/116 (46.55%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  668 PXNWCLPSHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFVFPTIG 1015
            P   C    NQPGEICIRG QIMKGYLNDPEATA TI+ EGWL TGD+                 +IK+KG Q A   +L+    +H  +      P  +E AG+VPVAFV  + G
Sbjct:  377 PDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVA-PAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNG 491          
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CL3_ARATH (4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana GN=4CL3 PE=1 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 7.620e-108
Identity = 167/227 (73.57%), Postives = 181/227 (79.74%), Query Frame = 3
Query:   15 PENCLHFTVLSEADEDQIPE--VAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTGASL 689
            PENCL F+ L   DE    +  V I  DD  ALPFSSGTTGLPKGVVLTHKSLITSVAQQVDG+NPNLYL + DV+LCVLPLFHIYSLNSVLL SLR+GA VLLM KFEIGALL+LIQRHRV+             KNP V  YDLSS+R VLSGAAPLGKEL+D+LR R+PQAILGQGYGMTEAGPVLSM LGFAK+P PTKSGSCGTVVRNAELKV+   T  SL
Sbjct:  178 PENCLPFSTLITDDETNPFQETVDIGGDDAAALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGDNPNLYLKSNDVILCVLPLFHIYSLNSVLLNSLRSGATVLLMHKFEIGALLDLIQRHRVTIAALVPPLVIALAKNPTVNSYDLSSVRFVLSGAAPLGKELQDSLRRRLPQAILGQGYGMTEAGPVLSMSLGFAKEPIPTKSGSCGTVVRNAELKVVHLETRLSL 404          

HSP 2 Score: 100.908 bits (250), Expect = 7.620e-108
Identity = 55/108 (50.93%), Postives = 66/108 (61.11%), Query Frame = 2
Query:  692 HNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFVFPTIG 1015
            +NQPGEICIRG QIMK YLNDPEAT+ATID EGWL TGD+                 +IKFKG Q     +L+    +HH +      PQ +EVAG+VPVAFV  + G
Sbjct:  406 YNQPGEICIRGQQIMKEYLNDPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKFKGFQ-VPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNG 512          
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 6.400e-107
Identity = 153/224 (68.30%), Postives = 187/224 (83.48%), Query Frame = 3
Query:   21 NCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTGASLP 692
            N LHF+ L+ ADE+++P+V I PD  VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDGENPNLY+ + DV+LCVLPLFHIYSLNSVLLC LRAG+G+L+MQKFEI   LELIQ+++V+             K+ +V +YDLSS+R V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+PF  KSG+CGTVVRNAE+K++DP TG+SLP
Sbjct:  167 NILHFSELTGADENEMPKVEISPDGVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYMHSDDVLLCVLPLFHIYSLNSVLLCGLRAGSGILIMQKFEIVPFLELIQKYKVTIGPFVPPIVLAIAKSTVVDNYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPETGSSLP 390          

HSP 2 Score: 94.7449 bits (234), Expect = 6.400e-107
Identity = 53/107 (49.53%), Postives = 63/107 (58.88%), Query Frame = 2
Query:  695 NQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFVFPTIG 1015
            N PGEICIRG QIMKGYLNDPEATA TID EGWL TGD+                 +IK+KG Q A   +L+    +H  +      P K+E AG+VPVAFV  + G
Sbjct:  392 NHPGEICIRGDQIMKGYLNDPEATARTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVA-PAELEALLLTHPCISDAAVVPMKDEAAGEVPVAFVVKSNG 497          
BLAST of DY258515 vs. ExPASy Swiss-Prot
Match: 4CL1_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.194e-105
Identity = 151/230 (65.65%), Postives = 187/230 (81.30%), Query Frame = 3
Query:    3 IDAPPENCLHFTVLSEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSIRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPXTGASLP 692
            ID  P++CLHF+ L EADE ++PEV I  DD VALP+SSGTTGLPKGV+LTHK L+TSVAQQVDG+NPNLY+ + DV++C+LPLFHIYSLN+VL C LRAG  +L+MQKF+I   LELIQ+++V+             K+P+V  YDLSS+R V+SGAAPLGKELEDA+R++ P A LGQGYGMTEAGPVL+MCL FAK+P+  KSG+CGTVVRNAE+K++DP T ASLP
Sbjct:  153 IDDAPQDCLHFSKLMEADESEMPEVVINSDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGDNPNLYMHSEDVMICILPLFHIYSLNAVLCCGLRAGVTILIMQKFDIVPFLELIQKYKVTIGPFVPPIVLAIAKSPVVDKYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPYEIKSGACGTVVRNAEMKIVDPETNASLP 382          

HSP 2 Score: 89.7373 bits (221), Expect = 1.194e-105
Identity = 55/114 (48.25%), Postives = 64/114 (56.14%), Query Frame = 2
Query:  674 NWCLPSHNQPGEICIRGPQIMKGYLNDPEATAATIDVEGWLLTGDLSXXXXXXXXXXXXXXXGIIKFKGIQGAGRRKLKPPF*SHHPLQKQLGFPQKNEVAGKVPVAFVFPTIG 1015
            N  LP  NQ GEICIRG QIMKGYLNDPE+T  TID EGWL TGD+                 IIK+KG Q A   +L+    +H  +      P  +E AG+VPVAFV  T G
Sbjct:  378 NASLP-RNQRGEICIRGDQIMKGYLNDPESTRTTIDEEGWLHTGDIGFIDDDDELFIVDRLKEIIKYKGFQVA-PAELEALLLTHPTISDAAVVPMIDEKAGEVPVAFVVRTNG 489          
The following BLAST results are available for this feature:
BLAST of DY258515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
4CL2_SOYBN5.559e-12380.794-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2[more]
4CL2_TOBAC6.894e-11270.004-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=... [more]
4CL2_ORYSJ1.173e-11170.74Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa... [more]
4CL1_TOBAC7.556e-11167.834-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=... [more]
4CL_PINTA2.857e-11068.124-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2... [more]
4CL2_SOLTU2.400e-10966.524-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=... [more]
4CL1_SOLTU3.131e-10966.524-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=... [more]
4CL3_ARATH7.620e-10873.574-coumarate--CoA ligase 3 OS=Arabidopsis thaliana ... [more]
4CL_VANPL6.400e-10768.304-coumarate--CoA ligase OS=Vanilla planifolia GN=4... [more]
4CL1_PETCR1.194e-10565.654-coumarate--CoA ligase 1 OS=Petroselinum crispum ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI2AF11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258515 ID=DY258515; Name=DY258515; organism=Citrus clementina; type=EST; length=1287bp
CGATCGATGCCCCTCCGGAGAATTGCCTGCATTTCACAGTGTTATCGGAA
GCAGATGAGGATCAAATCCCAGAAGTTGCCATCAAGCCCGACGATCCTGT
GGCGTTGCCTTTCTCTTCGGGCACCACGGGATTGCCTAAAGGAGTGGTGC
TGACGCACAAGAGCTTGATCACCAGCGTGGCGCAGCAAGTGGATGGAGAG
AACCCGAATCTTTACTTGACAAACGGAGACGTTGTGCTGTGCGTTTTACC
TTTGTTTCACATTTATTCGTTGAACAGCGTGCTTCTGTGCTCGTTGAGAG
CTGGGGCTGGGGTTCTGTTGATGCAGAAGTTTGAGATAGGGGCGCTGCTG
GAGCTGATACAGCGGCACAGGGTGTCGGTGGCGGCTGTGGTGCCGCCCTT
GGTGCTGGCGCTGGCCAAGAACCCGATGGTGGCGGATTATGACCTGAGCT
CGATCAGGGTGGTGCTTTCCGGGGCGGCGCCGCTGGGGAAGGAGCTTGAA
GATGCTCTCCGAAGTAGAGTCCCTCAAGCAATCTTGGGTCAGGGATATGG
AATGACAGAGGCAGGGCCAGTGCTATCAATGTGCCTAGGATTTGCAAAGC
AGCCATTTCCTACAAAGTCAGGATCATGTGGCACCGTTGTTAGAAATGCT
GAGCTCAAAGTTATTGACCCTGNAACTGGTGCCTCCCTTCCCACAATCAA
CCTGGCGAAATTTGCATCCGCGGCCCTCAAATTATGAAAGGTTACTTGAA
TGATCCTGAGGCAACTGCGGCAACTATAGACGTTGAGGGTTGGCTTCTTA
CTGGTGACCTAAGCTTTGTTGATGATGATGATGAGGTTTTCATAGTCGAT
AAGGTCAAGGGAATCATCAAATTCAAAGGGATCCAGGGTGCCGGCCGGCG
GAAATTGAAGCCCCCCTTTTAAAGCCACCATCCATTGCAAAAGCAGCTGG
GGTTCCCCCAAAAAAATGAAGTGGCAGGAAAAGTTCCGGTTGCTTTTGTA
TTTCCAACCATTGGGGTTTAACTTTACCGAGGAACCCATTTAAAAAATAC
AAACAAAAACGGGGGGGGGTTTAACAAAAACGGCACAAAATTTTTTTTTG
TTCCTTGCGCATCCCAAATTCCCTTTCCGGGAAAAATTTTGGGAAAAAAA
CCCCAAAAACCAAGACGCCCCCCTCCCCACGGCCCCCTTAAAATTATTTC
CTTTTCTTTTTATTATTACTCTTTTTGTTTTTTCTGTTCCGCCCCCGCTG
TTGGTGTGTGGGGGGCGATTTCCCACAAAAACCCCAC
back to top