DY258555

Overview
NameDY258555
Unique NameDY258555
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1166 contig Ccv1_Contig1166:1..919. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258555 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 436.417 bits (1121), Expect = 1.072e-121
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 2
Query:   29 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK 694
            MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK
Sbjct:    1 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK 222          
BLAST of DY258555 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 4.546e-88
Identity = 168/216 (77.78%), Postives = 186/216 (86.11%), Query Frame = 2
Query:   29 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQS-PGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 673
            M+ S SVTELQVEN TF P+V+PPGSTK+ FLGGAGERGLEI+GKF+KFTAIGVYLED AV  L  KWKGK+A ELTESVEFFRDVVTG FEKF++VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAIEKF EVFKDE FPPGSSILFT S  GSLTI FSKD S+P+ G  VIE+ LL+ +VLES+IGKNGVSPAAK+SLA RLS L N
Sbjct:    1 MSTSLSVTELQVENFTFPPTVKPPGSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVIGKNGVSPAAKESLASRLSPLFN 216          
BLAST of DY258555 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 323.553 bits (828), Expect = 1.013e-87
Identity = 162/218 (74.31%), Postives = 189/218 (86.70%), Query Frame = 2
Query:   20 LSPMNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 670
            +SP + SPSV ++Q+E+  F P+V+PPG++K  FLGGAGERGLEI+GKF+KFTAIGVYLED A+P LA KWKGKTAEELT+SV+FFRD+V+GPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAEAKAIEKF EVFKDE FPPG SILFTQSP GSLTI+FSKDGS+P+ G  V+E+  LSEAVLES+IGK+GVSPAAKKSLA R+S LL
Sbjct:    1 MSP-SQSPSVAQVQIESHVFPPTVKPPGTSKPFFLGGAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLTIAFSKDGSLPETGTVVMENKQLSEAVLESIIGKHGVSPAAKKSLAARMSELL 217          
BLAST of DY258555 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.323e-87
Identity = 165/216 (76.39%), Postives = 186/216 (86.11%), Query Frame = 2
Query:   29 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 673
            M P PS+  LQVE   F PSV+PPGS+ + FLGGAG RGLEI+G FVKFTAIGVYLED+AVPLLA KWKGKTAEEL+ESVEFFRD+VTGPFEKF++VT ILPLTG QYSEKV+ENC+A WK  GIYTDAE KAIEKF EVFKD+ FPPG+SILFTQSP GSLTI FSKD S+P+   AVIE+ LLSEAVLES++GK+GVSPAAK+SLA RLS LLN
Sbjct:    1 MAPPPSLAGLQVEATAFPPSVKPPGSSNTLFLGGAGVRGLEIQGNFVKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILFTQSPKGSLTICFSKDASVPEAANAVIENKLLSEAVLESILGKHGVSPAAKRSLAARLSELLN 216          
BLAST of DY258555 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.727e-87
Identity = 165/214 (77.10%), Postives = 183/214 (85.51%), Query Frame = 2
Query:   29 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 667
            M+P PSVT +QVENV F PSV+PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE  AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF EV KDE FPPG+SILFT SP G+LT+SFSKDGS+P+ G AVIE+ LL+EAVLES+IGK+GVSP AKKSLA RLS L
Sbjct:    1 MSPVPSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of DY258555 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 1.120e-86
Identity = 164/214 (76.64%), Postives = 183/214 (85.51%), Query Frame = 2
Query:   29 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 667
            M+  PSVT +QVENV F PSV+PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE+ AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF EV KDE FPPG+SILFT SP G+LT+SFSKDGS+P+ G AVIE+ LL+EAVLES+IGK+GVSP AKKSLA RLS L
Sbjct:    1 MSQVPSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of DY258555 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 5.557e-86
Identity = 162/210 (77.14%), Postives = 183/210 (87.14%), Query Frame = 2
Query:   44 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 670
            SVT +Q+  ++F PSV+PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLED AVP LA KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF EVFKD+ FPPG+SILFTQSP GSLTI FSKDG IP+ G AVIE+ LLSE+VLES+IGK GVSP A+KS+A RLS LL
Sbjct:    4 SVTGIQIGGMSFPPSVKPPGSGNTFFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPDGSLTIGFSKDGCIPEVGNAVIENKLLSESVLESIIGKPGVSPEARKSVATRLSELL 213          
BLAST of DY258555 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 4.704e-85
Identity = 159/214 (74.30%), Postives = 186/214 (86.92%), Query Frame = 2
Query:   44 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTS 682
            SVTE+QVE+V F P V+PPGS+K+ FLGGAG RG+EI+GKF+KFTAIGVYLED+AVP LA KWKGK+A+ELTESVEFFRD+VTGP EKF +VT ILPLTG QYSEKV+ENC+A WK  GIY+DAEAKAIEKF E+FKD+ FPP +S LFTQSP GSLT+SFSKDGSIP+ G AV+E+ LLSEAVLES+IGK+GVSP AK++LA RL  LLN  S
Sbjct:    7 SVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTFPPAASNLFTQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESIIGKHGVSPEAKQNLATRLVQLLNENS 220          
BLAST of DY258555 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 2.335e-84
Identity = 159/210 (75.71%), Postives = 181/210 (86.19%), Query Frame = 2
Query:   44 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 670
            SVT +Q+   +F P+V+PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLED AVP L+ KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF EVFKD+ FPPG+SILFTQSP GSL I  SKDGSIP+ G AVIE+ LLSE+VLES+IGK GVSP A+KS+A RLS LL
Sbjct:    4 SVTGIQIGGTSFPPAVKPPGSGNTLFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESIIGKQGVSPEARKSVATRLSELL 213          
BLAST of DY258555 vs. ExPASy Swiss-Prot
Match: CFI2_LOTJA (Chalcone--flavonone isomerase 2 OS=Lotus japonicus GN=CHI2 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.727e-82
Identity = 157/211 (74.41%), Postives = 177/211 (83.89%), Query Frame = 2
Query:   41 PSVTELQVENVTFTPS-VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 667
            PSVT LQVENV F P+ ++PP S  + FLGGAGERGL I+ KFVKFTAIG+YL+D AVP LA KWKGK  +ELTESV+FFRD+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIYTD E KAI+KF  VFKD+ FPPGSSILFT  P GSL ISFSKDGSIP+   AVI++ LLSEAVLESMIG +GVSPAAK+SLA RLS L
Sbjct:    4 PSVTALQVENVAFPPTLIKPPASANTLFLGGAGERGLHIQDKFVKFTAIGIYLQDTAVPSLAVKWKGKPVDELTESVQFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKHLGIYTDEEGKAIDKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMIGAHGVSPAAKQSLASRLSEL 214          
The following BLAST results are available for this feature:
BLAST of DY258555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CITSI1.072e-121100.00Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI_GOSHI4.546e-8877.78Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI_CAMSI1.013e-8774.31Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI_PYRCO1.323e-8776.39Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI2_VITVI1.727e-8777.10Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI1_VITVI1.120e-8676.64Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]
CFI1_FRAAN5.557e-8677.14Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
CFI_ELAUM4.704e-8574.30Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI2_FRAAN2.335e-8475.71Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI2_LOTJA3.727e-8274.41Chalcone--flavonone isomerase 2 OS=Lotus japonicus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BD11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258555 ID=DY258555; Name=DY258555; organism=Citrus clementina; type=EST; length=919bp
CTGAAATTAATCAAAAAGGCTGTCACCGATGAATCCCTCACCGTCCGTCA
CCGAACTGCAGGTCGAGAACGTCACTTTCACGCCGTCCGTGCAACCTCCA
GGATCAACAAAGTCGCATTTCCTCGGCGGCGCAGGGGAGAGAGGATTGGA
GATTGAAGGGAAGTTCGTGAAGTTCACGGCGATAGGAGTGTACTTGGAGG
ATGACGCCGTGCCGTTACTCGCCGGCAAATGGAAGGGGAAGACTGCAGAG
GAGTTGACGGAATCCGTTGAGTTCTTCAGAGACGTCGTCACAGGTCCCTT
TGAGAAATTCATGAAGGTGACAATGATCTTGCCATTAACTGGCGCACAAT
ACTCAGAGAAGGTTGCCGAAAATTGCATTGCCATATGGAAATTTTTTGGA
ATTTACACTGATGCTGAAGCCAAAGCTATTGAAAAATTCACTGAGGTCTT
CAAGGATGAAATTTTCCCACCAGGATCCTCAATTCTCTTTACTCAATCAC
CAGGATCATTGACTATCAGCTTCTCCAAAGACGGTTCAATACCGAAAGAT
GGTGTTGCGGTAATAGAGAGTAATCTGCTTTCTGAGGCAGTACTGGAGTC
GATGATCGGCAAGAATGGTGTTTCTCCTGCAGCAAAGAAGAGTTTGGCTG
AAAGACTATCAGCACTGTTGAATGTAACTAGTGATAAGATGAAATGAAGA
AGTTGAAAAGTTTGCCAAATAATAAGCGAAGGCAGAGTTGTTAAATTGGC
AAACTTTTTTTTCTTTAATGTTAAATTAGTGTCCTTTCCTATGGACTCTC
AGTTGGGTTTGCTTTGTGAGAGCTAGAGCTCCCAAATTCTGAGTTTAATT
TCGAATGCTGATGTCCCTGACCAACTTTTTCCGGTTCTTTGAATTGGTTT
GAATAAACAGAATTTTTTA
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