DY258578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258578 vs. ExPASy Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 1.047e-56 Identity = 123/207 (59.42%), Postives = 137/207 (66.18%), Query Frame = 3 Query: 291 MDRQGHGGQPTSMGLVGSGAQVPYGTNPYQQNQMAGGPNPGPAVTSVGAIQSTSQPGGXXXXXXXXXXXXXXXXXXXXXXXXXXSFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILXLTLRSWNHTEENKRRTLQKNDIAAAITKTDIFDFLVDIVPREDLKDEVLASIPRGNLPVWGTSDMP 911 MD+Q HG SGA + YGTNPYQ N M+ T+ +QPG +FW NQ++EIEK DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFIL LTLRSWNHTEENKRRTLQKNDIAAA+T+TDIFDFLVDIVPREDL+DEVL SIPRG +P + P Sbjct: 1 MDQQDHGQ---------SGA-MNYGTNPYQTNPMS--------TTAATVAGGAAQPG------QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPEAAAAGYP 183
BLAST of DY258578 vs. ExPASy Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=1 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 8.586e-51 Identity = 108/179 (60.34%), Postives = 119/179 (66.48%), Query Frame = 3 Query: 339 GSGAQVPYGTNPYQQNQMAGGPNPG--PAVTSVGAIQSTSQPGGXXXXXXXXXXXXXXXXXXXXXXXXXXSFWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILXLTLRSWNHTEENKRRTLQKNDIAAAITKTDIFDFLVDIVPREDLKDEVLASI 869 G + + YG+NPYQ N M P PA + Q SFW Q++EIEK DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFIL LTLRSWNHTEENKRRTLQKNDIAAA+T+TDIFDFLVDIVPREDL+DEVL + Sbjct: 5 GQSSAMNYGSNPYQTNAMTTTPTGSDHPAYHQIHQQQQQQ------------------------LTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGV 159
BLAST of DY258578 vs. ExPASy Swiss-Prot
Match: NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=1 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 4.875e-46 Identity = 90/114 (78.95%), Postives = 103/114 (90.35%), Query Frame = 3 Query: 546 FWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILXLTLRSWNHTEENKRRTLQKNDIAAAITKTDIFDFLVDIVPREDLKDEVLASIPRGNLP 887 FWANQ QEIE DFKNH+LPLARIKKIMKADEDVRMISAEAPVIFA+ACEMFIL LTLR+W HTEENKRRTLQKNDIAAAI++TD+FDFLVDI+PR++LK+E L + +G +P Sbjct: 58 FWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGL-GVTKGTIP 170
BLAST of DY258578 vs. ExPASy Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 9.195e-45 Identity = 90/119 (75.63%), Postives = 104/119 (87.39%), Query Frame = 3 Query: 546 FWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILXLTLRSWNHTEENKRRTLQKNDIAAAITKTDIFDFLVDIVPREDLKDEVLASIPRGNLPVWGTS 902 FW Q QEIE+VNDFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FIL LT+RSW H EENKRRTLQKNDIAAAIT+TDIFDFLVDIVPR+++KDE A++ G + V T+ Sbjct: 47 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE--AAVLGGGMVVAPTA 163
BLAST of DY258578 vs. ExPASy Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.568e-44 Identity = 86/103 (83.50%), Postives = 96/103 (93.20%), Query Frame = 3 Query: 546 FWANQYQEIEKVNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILXLTLRSWNHTEENKRRTLQKNDIAAAITKTDIFDFLVDIVPREDLKDE 854 FW Q QEIE+VNDFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FIL LT+RSW H EENKRRTLQKNDIAAAIT+TDIFDFLVDIVPRE++K+E Sbjct: 60 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEE 162
BLAST of DY258578 vs. ExPASy Swiss-Prot
Match: NFYC_RAT (Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus GN=Nfyc PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 8.074e-33 Identity = 71/104 (68.27%), Postives = 84/104 (80.77%), Query Frame = 3 Query: 543 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILXLTLRSWNHTEENKRRTLQKNDIAAAITKTDIFDFLVDIVPREDLK 848 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI LTLR+W HTE+NKRRTLQ+NDIA AITK D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of DY258578 vs. ExPASy Swiss-Prot
Match: NFYC_PONAB (Nuclear transcription factor Y subunit gamma OS=Pongo abelii GN=NFYC PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 8.074e-33 Identity = 71/104 (68.27%), Postives = 84/104 (80.77%), Query Frame = 3 Query: 543 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILXLTLRSWNHTEENKRRTLQKNDIAAAITKTDIFDFLVDIVPREDLK 848 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI LTLR+W HTE+NKRRTLQ+NDIA AITK D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of DY258578 vs. ExPASy Swiss-Prot
Match: NFYC_MOUSE (Nuclear transcription factor Y subunit gamma OS=Mus musculus GN=Nfyc PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 8.074e-33 Identity = 71/104 (68.27%), Postives = 84/104 (80.77%), Query Frame = 3 Query: 543 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILXLTLRSWNHTEENKRRTLQKNDIAAAITKTDIFDFLVDIVPREDLK 848 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI LTLR+W HTE+NKRRTLQ+NDIA AITK D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of DY258578 vs. ExPASy Swiss-Prot
Match: NFYC_HUMAN (Nuclear transcription factor Y subunit gamma OS=Homo sapiens GN=NFYC PE=1 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 8.074e-33 Identity = 71/104 (68.27%), Postives = 84/104 (80.77%), Query Frame = 3 Query: 543 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILXLTLRSWNHTEENKRRTLQKNDIAAAITKTDIFDFLVDIVPREDLK 848 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI LTLR+W HTE+NKRRTLQ+NDIA AITK D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124
BLAST of DY258578 vs. ExPASy Swiss-Prot
Match: NFYC_BOVIN (Nuclear transcription factor Y subunit gamma OS=Bos taurus GN=NFYC PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 8.074e-33 Identity = 71/104 (68.27%), Postives = 84/104 (80.77%), Query Frame = 3 Query: 543 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILXLTLRSWNHTEENKRRTLQKNDIAAAITKTDIFDFLVDIVPREDLK 848 SFW +EI V DF+ LPLARIKKIMK DEDV+MISAEAPV+FA+A ++FI LTLR+W HTE+NKRRTLQ+NDIA AITK D FDFL+DIVPR++LK Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELK 124 The following BLAST results are available for this feature:
BLAST of DY258578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258578 ID=DY258578; Name=DY258578; organism=Citrus clementina; type=EST; length=1205bpback to top |