DY258603

Overview
NameDY258603
Unique NameDY258603
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1269
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15539 contig Ccv1_Contig15539:10..1278. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258603 vs. ExPASy Swiss-Prot
Match: PPT1_CAEEL (Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 3.378e-37
Identity = 92/270 (34.07%), Postives = 136/270 (50.37%), Query Frame = 2
Query:   44 MAFRSVPISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQ----GVKQFTENLSSFSGSKGYCIEVGDG-TWD---SWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC-GSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTL 826
            M +  + +  + +    F   ++ +P ++ HG+GD C N      VK+  E      G   + +++G   T D    ++    E   + C K+K   EL  GYN +G SQG    R V + C   PP+KN VS+GG H G    P C G  I C     LI    Y  +VQ  +  + Y   PN + +Y ++  FL  +NNE  +  N TYK     L+NLVL+ F  D +++PK+++WFG+Y DG    +LP  +T LY ED IGLK L
Sbjct:    1 MRYFPLLLCLLAITTAEFRNATKQVPVVMWHGMGDCCCNPLSMGSVKKLFEE--QIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMACIKIKNDPELKNGYNAIGFSQGAQFLRAVAQRCPN-PPMKNLVSVGGQHQGVFGAPYCIGDNIMCNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINNE--NNNNPTYKRNLLSLKNLVLVKFNQDHMVVPKDSSWFGFYKDGDIDTILPMNETDLYKEDRIGLKKL 265          
BLAST of DY258603 vs. ExPASy Swiss-Prot
Match: PPT3_DICDI (Palmitoyl-protein thioesterase 3 OS=Dictyostelium discoideum GN=ppt3 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 5.047e-33
Identity = 87/254 (34.25%), Postives = 138/254 (54.33%), Query Frame = 2
Query:   68 SFITVLLLFFFPVSRSIPFIVLHGIGD-QCSNQGVKQFTENLSSFSGSKGYCIEVGDGTWDSWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTL 826
            S I ++ L    VS + P +++HG+   + S + +K + E   S        +E+G+G +DS F  ++ Q E   + V+   +L+ G+N++G SQG LI R  V+     P V N++S  GP  G    P     +     + ++    Y   +Q  L+ + Y K P+ I KYLE+  FL  +NNE   K N+TYKE  + L  +VL    +DK +IPKE+ WF +Y DG+ + V+P Q+   Y+EDW+GL+TL
Sbjct:    6 SLILLIALAIALVSATRPVVLMHGVTTGKESMEPLKSWIEE--SIPDIYVLNVEIGNGAFDSIFTTMDSQIEEFAQVVQADPKLANGFNLIGFSQGTLIARAFVQRYNN-PQVYNYISWNGPQGGQFGTPF----VNIPWVDKVLGTIPYEKTIQKKLSVAEYWKDPHRIDKYLERSIFLADINNEYQVK-NTTYKENLTKLNAMVLTYSTNDKTIIPKESGWFSFYADGSGTEVVPLQQQTQYSEDWLGLRTL 251          
BLAST of DY258603 vs. ExPASy Swiss-Prot
Match: PPT1_MACFA (Palmitoyl-protein thioesterase 1 OS=Macaca fascicularis GN=PPT1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 4.421e-29
Identity = 77/247 (31.17%), Postives = 119/247 (48.18%), Query Frame = 2
Query:  116 IPFIVLHGIGDQCSNQ----GVKQFTENLSSFSGSKGYCIEVG----DGTWDSWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCG--SGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTL 826
            +P ++ HG+GD C N      +K+  E      G     +E+G    +   +S+F  +  Q   VC+ + K  +L +GYN +G SQG    R V + C   PP+ N +S+GG H G   +P C   S   C      + A  YS  VQ+ L  + Y   P     Y     FL  +N E     N +YK+    L+  V++ F +D ++ P ++ WFG+Y  G     +P Q+T LYT+D +GLK +
Sbjct:   33 LPLVIWHGMGDSCCNPLSMGAIKKMVEK--KIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQTLAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMINLISVGGQHQGVFGLPRCPGESSHICDFIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQERGI--NESYKKNLMALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEM 274          
BLAST of DY258603 vs. ExPASy Swiss-Prot
Match: PPT1_HUMAN (Palmitoyl-protein thioesterase 1 OS=Homo sapiens GN=PPT1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 4.421e-29
Identity = 77/247 (31.17%), Postives = 119/247 (48.18%), Query Frame = 2
Query:  116 IPFIVLHGIGDQCSNQ----GVKQFTENLSSFSGSKGYCIEVG----DGTWDSWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCG--SGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTL 826
            +P ++ HG+GD C N      +K+  E      G     +E+G    +   +S+F  +  Q   VC+ + K  +L +GYN +G SQG    R V + C   PP+ N +S+GG H G   +P C   S   C      + A  YS  VQ+ L  + Y   P     Y     FL  +N E     N +YK+    L+  V++ F +D ++ P ++ WFG+Y  G     +P Q+T LYT+D +GLK +
Sbjct:   33 LPLVIWHGMGDSCCNPLSMGAIKKMVEK--KIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMINLISVGGQHQGVFGLPRCPGESSHICDFIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQERGI--NESYKKNLMALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEM 274          
BLAST of DY258603 vs. ExPASy Swiss-Prot
Match: PPT1_RAT (Palmitoyl-protein thioesterase 1 OS=Rattus norvegicus GN=Ppt1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 6.385e-28
Identity = 77/248 (31.05%), Postives = 118/248 (47.58%), Query Frame = 2
Query:  119 PFIVLHGIGDQCSNQ----GVKQFTENLSSFSGSKGYCIEVG----DGTWDSWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCG--SGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLKR 832
            P ++ HG+GD C N      +K+  E      G     +E+G    +   +S+F  +  Q  + C+ ++K  +L  GYN +G SQG    R V + C   PP+   +S+GG H G   +P C   S   C      + A  YS  VQ+ L  + Y   P     Y     FL  +N E     N +YKE    L+  V++ F +D ++ P ++ WFG+Y  G     +P Q+T LYTED +GLK + +
Sbjct:   34 PLVIWHGMGDSCCNPMSMGSIKKMVEK--EIPGIYVLSLEIGKNMVEDVENSFFLNVNLQVGMACQILEKDPKLQHGYNAIGFSQGGQFLRAVAQRCPT-PPMMTLISVGGQHQGVFGLPRCPGESSHICDFIRKSLNAGAYSKVVQERLVQAQYWHDPIKEEVYRNCSIFLADINQER--HINESYKENLMALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQETTLYTEDRLGLKKMDK 276          
BLAST of DY258603 vs. ExPASy Swiss-Prot
Match: PPT1_BOVIN (Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=PPT1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 8.339e-28
Identity = 74/249 (29.72%), Postives = 120/249 (48.19%), Query Frame = 2
Query:  116 IPFIVLHGIGDQCSNQ----GVKQFTENLSSFSGSKGYCIEVG----DGTWDSWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCG--SGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLKR 832
            +P ++ HG+GD C N      +K+  E      G     +E+G    +   +S+F  +  Q   VC+ + K  +L +GYN +G SQG    R V + C   PP+ N +S+GG H G   +P C   S   C      + A  Y+  +Q+ L  + Y   P     Y     FL  +N E     N +YK+    L+  V++ F +D ++ P ++ WFG+Y  G     +P Q++ LYT+D +GLK + +
Sbjct:   33 LPLVIWHGMGDSCCNPLSMGAIKKMVEK--KIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMVNLISVGGQHQGVFGLPRCPGESSHICDFIRKTLNAGAYNKAIQERLVQAEYWHDPIREDIYRNHSIFLADINQERGV--NESYKKNLMALKKFVMVKFLNDTIVDPVDSEWFGFYRSGQAKETIPLQESTLYTQDRLGLKAMDK 276          
BLAST of DY258603 vs. ExPASy Swiss-Prot
Match: PPT1_MOUSE (Palmitoyl-protein thioesterase 1 OS=Mus musculus GN=Ppt1 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 1.422e-27
Identity = 76/248 (30.65%), Postives = 119/248 (47.98%), Query Frame = 2
Query:  119 PFIVLHGIGDQCSNQG----VKQFTENLSSFSGSKGYCIEVGDGTWD----SWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCG--SGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLKR 832
            P ++ HG+GD C N      +K+  E      G     +E+G    +    S+F  +  Q  +VC+ ++K  +L +GYN +G SQG    R V + C   PP+   +S+GG H G   +P C   S   C      + A  YS  VQ+ L  + Y   P     Y     FL  +N E     N +YK+    L+  V++ F +D ++ P ++ WFG+Y  G     +P Q++ LYTED +GLK + +
Sbjct:   34 PLVIWHGMGDSCCNPMSMGVIKKMVEK--EIPGIYVLSLEIGKNMMEDVENSFFLNVNVQVNMVCQILEKDPKLQQGYNAIGFSQGGQFLRAVAQRCPT-PPMMTLISVGGQHQGVFGLPRCPGESSHICDFIRKSLNAGAYSKLVQERLVQAQYWHDPIKESVYRNYSIFLADINQERCV--NESYKKNLMALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQESTLYTEDRLGLKKMDK 276          
BLAST of DY258603 vs. ExPASy Swiss-Prot
Match: PDF1_SCHPO (Palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase fusion 1 OS=Schizosaccharomyces pombe GN=pdf1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.279e-24
Identity = 63/232 (27.16%), Postives = 119/232 (51.29%), Query Frame = 2
Query:   65 ISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYCIEVGDGTWDS----WFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCG-SGIFC-IIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGY 742
            IS   V L      S  +P ++ HG+GD  ++  + + ++ +   +    Y I VGD  ++     +   LE+Q + VC+ +     LS G+  +GLSQG L  R + + C+    +++ ++LG PH+G  ++P C  + + C  + ++++   ++  ++Q+H+  + Y +      KYLE  KFL  LNNE+     +   E+   L NLV + F+ D ++ P  +  FG+
Sbjct:    9 ISLDKVRLAINDGASEQLPVVIWHGLGDTPTSFTLTEVSQRVQKLTKGAVYAIRVGDNEFEDIKAGYLGKLEDQLDEVCDLIGNEDSLSNGFYALGLSQGGLFLRALAQTCDAAK-IRSLITLGSPHSGINTIPGCSPTNLICKAVVHSILGLGIWHSWIQNHVVQAQYYRTEKQYDKYLENNKFLTHLNNEVLHDNYTRNIEKLKELDNLVAVSFERDDIVEPPYSTGFGW 239          
BLAST of DY258603 vs. ExPASy Swiss-Prot
Match: PPT1_DROME (Palmitoyl-protein thioesterase 1 OS=Drosophila melanogaster GN=Ppt1 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 2.125e-23
Identity = 75/248 (30.24%), Postives = 118/248 (47.58%), Query Frame = 2
Query:  116 IPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC--IEVGDGTWDSW----FKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIF--CIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLKRK 835
            +P ++ HG+GD C          NL       GY   +++G      W    F    EQ + VC+++ + + L++GY+ +G SQG    R V E C   PP++N ++LGG H G   +P+C +     C     L+    Y+  VQ  L  + Y   P    KY     FL  +NNEL    N  Y E    L+  V++ F +D ++ PKE+ WF YY  G    + P  ++K+Y +  +GL  + R+
Sbjct:   41 LPVVLWHGMGDTCCVPFSLGAIMNLIVEQTKGGYVRSLQIGGNVLIDWQSGFFIHPNEQVDYVCKQLLQDEHLAKGYHAIGFSQGGQFLRAVAERCPN-PPMRNLITLGGQHQGIFGLPMCPTLTEKPCDYITRLLDNAAYAPEVQKALVQATYWHDPIMENKYRLGSTFLADINNEL--FINKFYIENLQKLKKFVMVQFLNDTIVQPKESQWFQYYTTGQNKVIQPFTESKVYQD--LGLDKMHRQ 283          
BLAST of DY258603 vs. ExPASy Swiss-Prot
Match: PPT2B_XENLA (Lysosomal thioesterase PPT2-B OS=Xenopus laevis GN=ppt2-B PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 6.853e-14
Identity = 53/169 (31.36%), Postives = 90/169 (53.25%), Query Frame = 2
Query:  320 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTL 826
            +G +++  SQG LI RG++E       V  F++L  P  G   + L       ++  + ++   Y  + ++ ++  GY + P+   KYLE   FLPKLNNEL D  ++  K  F  L+ LVLI   DD+V+ P +++ FG+Y +     V+  +   +Y +D  GL++L
Sbjct:   89 KGVHLICYSQGGLICRGLLETMPEHN-VDTFIALSSPLMGQYGMTLYVQKALPLVNISALQEVCYRKFFKE-ISICGYWRDPHRYEKYLEYSAFLPKLNNELLDSNSTERKRNFLRLRKLVLIGGPDDEVIAPWQSSHFGFYNEK--EEVVNMKDQMVYQKDTFGLQSL 253          
The following BLAST results are available for this feature:
BLAST of DY258603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
PPT1_CAEEL3.378e-3734.07Palmitoyl-protein thioesterase 1 OS=Caenorhabditis... [more]
PPT3_DICDI5.047e-3334.25Palmitoyl-protein thioesterase 3 OS=Dictyostelium ... [more]
PPT1_MACFA4.421e-2931.17Palmitoyl-protein thioesterase 1 OS=Macaca fascicu... [more]
PPT1_HUMAN4.421e-2931.17Palmitoyl-protein thioesterase 1 OS=Homo sapiens G... [more]
PPT1_RAT6.385e-2831.05Palmitoyl-protein thioesterase 1 OS=Rattus norvegi... [more]
PPT1_BOVIN8.339e-2829.72Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=... [more]
PPT1_MOUSE1.422e-2730.65Palmitoyl-protein thioesterase 1 OS=Mus musculus G... [more]
PDF1_SCHPO3.279e-2427.16Palmitoyl-protein thioesterase-dolichyl pyrophosph... [more]
PPT1_DROME2.125e-2330.24Palmitoyl-protein thioesterase 1 OS=Drosophila mel... [more]
PPT2B_XENLA6.853e-1431.36Lysosomal thioesterase PPT2-B OS=Xenopus laevis GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CC07FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258603 ID=DY258603; Name=DY258603; organism=Citrus clementina; type=EST; length=1269bp
AATAAAATAAAAAAAGGAACCTTTTGATCGCATCAGCATTTTCATGGCTT
TTCGCTCAGTACCCATTTCTTTCATTACCGTCTTGCTCTTGTTTTTCTTT
CCAGTTTCTCGTTCGATTCCCTTCATAGTACTCCATGGTATTGGAGACCA
GTGTTCCAATCAAGGAGTGAAACAGTTCACCGAAAATCTTAGCAGTTTTT
CAGGTTCTAAAGGATATTGCATAGAAGTTGGGGATGGGACATGGGATTCC
TGGTTTAAGCCTCTGGAGGAACAGACAGAAATTGTTTGTGAAAAGGTGAA
GAAAATGAAAGAACTGAGTGAAGGTTACAACATAGTTGGTCTCTCCCAGG
GTAACTTAATAGGTCGAGGTGTTGTAGAGTTCTGCGAAGGTGGACCTCCG
GTTAAGAACTTTGTTTCCTTGGGAGGGCCTCATGCTGGTACTGCTTCTGT
GCCCCTTTGTGGTTCTGGTATCTTTTGCATAATTGCAAACAACCTAATCA
AGGCAGAGGTCTACAGTGACTATGTCCAAGATCATTTGGCTCCCAGTGGA
TATCTTAAATTTCCAAATGACATCCCCAAGTATTTGGAAAAATGTAAGTT
CCTTCCAAAGCTTAACAACGAACTCCCTGATAAGAGGAACTCCACTTACA
AGGAACGCTTCAGCTGCTTGCAAAACTTAGTGCTTATAATGTTCAAGGAT
GACAAGGTTTTGATACCCAAGGAAACAGCCTGGTTCGGATATTATCCAGA
TGGGGCCTTCAGTCCAGTTCTGCCTCCACAAAAGACAAAGCTTTATACTG
AAGACTGGATCGGCCTTAAAACTTTAAAAAGAAAGCTGGAAGGGTTCACT
TCCTCATTGTGCAGGAAGTTCTTCTGAAAATCTCCAAAGCTGAAATGAAA
AAACCAAATATTTCCTTATTTTAAGGAATCAAGGATCCGGTCAAAAATGA
AAAAAAGCAGAAAAAAAAAAGGAACGAAACAAGAAAAAAGGGGTCCACTG
AACTTGGTTTTCCGAAGGGATTTTCTCCCCTTAGTTATGGCCCTTTTTCC
CGGAAAAAATTTTTTCCCCCAAAATAACAAAAAATCCTCAAAAAAGAATA
AGCCCCCTTATATTTTAAATTTTATATAAAACCTTTTCTTTAAAAAAATA
TTAAACATAAAAAAAAAAACCCCATTTTCCCCCCTTCTCCTTGTGAAGGG
GGGGAAAATTCCTCCCCCCCACCCCGCAGCGGGCGCTATATTTTTTTTTT
TTTGGTTTATAATAAAAAA
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