DY258604

Overview
NameDY258604
Unique NameDY258604
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5656 contig Ccv1_Contig5656:346..1138. BLAST: Citrus Unigene V1 Contigs to Populus V2 proteins
Homology
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_SOLLC (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.159e-68
Identity = 133/171 (77.78%), Postives = 148/171 (86.55%), Query Frame = 3
Query:   30 AVQQNGSPEVKEPSPKIPKLHQNGVENDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542
            A  Q  SPE+ EPSPK+ KL     EN N+    RVKKLSE AVLP R S LAAGYDLSSAAETKVPARGKALVPTDLSIA+P+GTYARIAPRSGLAWK+S+DVGAGVIDADYRGPVGV+LFNHS+VDF VKVGDRIAQLI++KIVTP+V +V++LDSTVRG GGFGSTGV
Sbjct:    2 AENQINSPEITEPSPKVQKLDHP--ENGNV-PFFRVKKLSENAVLPSRASSLAAGYDLSSAAETKVPARGKALVPTDLSIAVPQGTYARIAPRSGLAWKYSIDVGAGVIDADYRGPVGVVLFNHSEVDFEVKVGDRIAQLIVQKIVTPEVEQVDDLDSTVRGSGGFGSTGV 169          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_DICDI (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Dictyostelium discoideum GN=dut PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.414e-52
Identity = 101/137 (73.72%), Postives = 116/137 (84.67%), Query Frame = 3
Query:  132 RVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542
            +VKKLS+KA++P+RGS  AAGYDLSSA E  VPA GKAL  TDL IAIP+GTY RIAPRSGLAWK+ +D GAGVID+DYRG VGV+LFNHSDVDF V VGDR+AQLI E+IVTP+ LEV+ +D T RG GGFGSTGV
Sbjct:   39 KVKKLSDKAIIPQRGSKGAAGYDLSSAHELVVPAHGKALAMTDLQIAIPDGTYGRIAPRSGLAWKNFIDCGAGVIDSDYRGNVGVVLFNHSDVDFKVAVGDRVAQLIFERIVTPEPLEVDEIDETQRGAGGFGSTGV 175          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_NEUCR (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Neurospora crassa GN=dut-1 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.129e-49
Identity = 96/138 (69.57%), Postives = 116/138 (84.06%), Query Frame = 3
Query:  129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542
            L +KKLS+KA LP RGS  AAGYD+ ++ ET +PARGK LV TD+S+A+P GTY RIAPRSGLA K+ +DVGAGVIDADYRG V V+LFNHSDVDFVV  GDR+AQL++E+I TP+V+EVE L+ +VRG GGFGSTGV
Sbjct:   18 LLIKKLSDKARLPTRGSAFAAGYDIYASKETTIPARGKGLVETDISMAVPAGTYGRIAPRSGLAAKNFIDVGAGVIDADYRGQVKVLLFNHSDVDFVVNEGDRVAQLVLERIYTPEVVEVEQLEESVRGAGGFGSTGV 155          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_SCHPO (Probable deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Schizosaccharomyces pombe GN=SPAC644.05c PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.318e-49
Identity = 97/136 (71.32%), Postives = 115/136 (84.56%), Query Frame = 3
Query:  135 VKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542
            V+KLSEKA +P +GS  +AGYDL +AAE  VP RGK LV TDL+IA+PEGTY R+APRSGLA KHS+D GAGVIDADYRG V V+LFN+SDVDF +KVGDRIAQLI+E+IV P V+ VE+L++TVRG  GFGSTGV
Sbjct:    5 VQKLSEKATIPTKGSANSAGYDLYAAAECIVPRRGKVLVDTDLAIAVPEGTYGRVAPRSGLASKHSIDTGAGVIDADYRGHVRVLLFNYSDVDFPIKVGDRIAQLILERIVNPPVILVESLEATVRGANGFGSTGV 140          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_DEBHA (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Debaryomyces hansenii GN=DUT1 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.889e-42
Identity = 85/139 (61.15%), Postives = 106/139 (76.26%), Query Frame = 3
Query:  129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEV--ENLDSTVRGEGGFGSTG 539
            LRV   SE A LP RGS L+AGYD+ ++ E  +PA+G+ LV TD+S+A+P GTY R+APRSGLA KH +  GAGVIDADYRG V V+LFNH+  DF ++ GDRIAQL++EKIV  D+ ++  E LD T RGEGGFGSTG
Sbjct:   20 LRVFLRSENATLPTRGSVLSAGYDIYASEEAVIPAQGQGLVGTDISVAVPIGTYGRVAPRSGLAVKHGISTGAGVIDADYRGEVKVVLFNHAQKDFTIQKGDRIAQLVLEKIVMADIKQITAEELDITARGEGGFGSTG 158          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_CANAL (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Candida albicans GN=DUT1 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.132e-41
Identity = 86/139 (61.87%), Postives = 104/139 (74.82%), Query Frame = 3
Query:  129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEV--ENLDSTVRGEGGFGSTG 539
            L+V   S K  +P +GS LAAGYDL SA    +PA G+ LV TD+SI +P GTY R+APRSGLA KH +  GAGVIDADYRG V V+LFNHS+ DF +K GDRIAQL++E+IV  D+ E+  E LD+T RGEGGFGSTG
Sbjct:   19 LKVYLRSPKGKVPTKGSALAAGYDLYSAEAATIPAHGQGLVSTDISIIVPIGTYGRVAPRSGLAVKHGISTGAGVIDADYRGEVKVVLFNHSEKDFEIKEGDRIAQLVLEQIVNADIKEISLEELDNTERGEGGFGSTG 157          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_RAT (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Rattus norvegicus GN=Dut PE=2 SV=3)

HSP 1 Score: 168.703 bits (426), Expect = 3.292e-41
Identity = 87/137 (63.50%), Postives = 101/137 (73.72%), Query Frame = 3
Query:  129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTG 539
            LR  +LSE A  P RGS  AAGYDL SA +  +P+  KALV TD+ IA+P G Y R+APRSGLA KH +DVGAGVID DYRG VGV+LFN     F VK GDRIAQLI E+I+ PD+ EV+ LD+T RG GGFGSTG
Sbjct:   67 LRFVRLSEHATAPTRGSARAAGYDLYSAYDYTIPSMEKALVKTDIQIAVPSGCYGRVAPRSGLAVKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERILYPDLEEVQTLDNTERGSGGFGSTG 203          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_YARLI (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Yarrowia lipolytica GN=DUT1 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.335e-41
Identity = 86/140 (61.43%), Postives = 107/140 (76.43%), Query Frame = 3
Query:  129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPD--VLEVENLDSTVRGEGGFGSTGV 542
            L+V  L+E A  P RGS  AAGYDL +A E  +PA G+ LV   LS++IPEGTYARIAPRSGLA K+ +  GAGVID DYRGPV V+LFNHS  DF V +GDR+AQ+I+E+IVTP+  V++  +L+ST RG GGFGSTG+
Sbjct:    3 LKVAFLNENARAPTRGSVHAAGYDLYAAEEKTIPANGRGLVDLGLSMSIPEGTYARIAPRSGLAVKNGLSTGAGVIDYDYRGPVKVMLFNHSTEDFNVTIGDRVAQMILERIVTPEVQVVQTNDLESTERGAGGFGSTGI 142          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_PBCV1 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Paramecium bursaria Chlorella virus 1 GN=A551L PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.134e-40
Identity = 84/140 (60.00%), Postives = 104/140 (74.29%), Query Frame = 3
Query:  123 SLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542
            S L VKKL E A  P RGS  AAGYD+SS  +  VPA G+  V T +SI +P GTY RIAPRSGLA+K+ +DV AGVID+DYRG +  IL+N ++ D+++K GDRIAQLI+E+IVTPDV  V  L+ T RG GGFGSTG+
Sbjct:    2 SSLLVKKLVESATTPMRGSEGAAGYDISSVEDVVVPAMGRIAVSTGISIRVPNGTYGRIAPRSGLAYKYGIDVLAGVIDSDYRGELKAILYNTTERDYIIKKGDRIAQLILEQIVTPDVAVVLELEDTARGGGGFGSTGI 141          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_HUMAN (Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial OS=Homo sapiens GN=DUT PE=1 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 2.787e-40
Identity = 92/167 (55.09%), Postives = 110/167 (65.87%), Query Frame = 3
Query:   45 GSPEVKEPSPKIPKLHQNG-VENDNIGSL-LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTG 539
            GSP    P P+ P +  +       +G + LR  +LSE A  P RGS  AAGYDL SA +  +P   KA+V TD+ IA+P G Y R+APRSGLA KH +DVGAGVID DYRG VGV+LFN     F VK GDRIAQLI E+I  P++ EV+ LD T RG GGFGSTG
Sbjct:   87 GSPA---PGPETPAISPSKRARPAEVGGMQLRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERGSGGFGSTG 250          
The following BLAST results are available for this feature:
BLAST of DY258604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 440
Match NameE-valueIdentityDescription
DUT_SOLLC3.159e-6877.78Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_DICDI5.414e-5273.72Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_NEUCR1.129e-4969.57Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_SCHPO7.318e-4971.32Probable deoxyuridine 5'-triphosphate nucleotidohy... [more]
DUT_DEBHA3.889e-4261.15Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_CANAL1.132e-4161.87Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_RAT3.292e-4163.50Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_YARLI7.335e-4161.43Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_PBCV12.134e-4060.00Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_HUMAN2.787e-4055.09Deoxyuridine 5'-triphosphate nucleotidohydrolase, ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CC08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258604 ID=DY258604; Name=DY258604; organism=Citrus clementina; type=EST; length=793bp
CACTAAAGCTTGTTTTCAAAATGGCCCCAGCAGTTCAGCAAAATGGCAGC
CCAGAAGTCAAAGAGCCTTCTCCAAAGATCCCAAAACTACACCAGAACGG
CGTCGAAAATGACAACATAGGCTCTCTCTTGAGAGTTAAAAAGCTCTCCG
AAAAGGCTGTTTTGCCCAAAAGAGGCTCCCCTCTTGCCGCTGGCTACGAT
CTCTCCAGTGCTGCGGAGACTAAGGTGCCAGCAAGGGGAAAAGCTCTTGT
TCCAACAGATCTGAGCATCGCAATACCCGAAGGAACATATGCACGTATTG
CGCCAAGATCGGGACTGGCGTGGAAGCACTCAATGGACGTGGGAGCCGGG
GTGATTGATGCGGATTACAGGGGCCCTGTTGGGGTGATTTTGTTTAATCA
TTCTGATGTTGATTTTGTGGTGAAAGTGGGTGATAGAATTGCTCAATTAA
TAATTGAGAAAATCGTGACTCCTGATGTGTTGGAGGTTGAGAACTTGGAC
TCTACTGTCAGAGGAGAAGGTGGTTTTGGCTCTACTGGGGTTTGAATTTC
TTTGTTGAAGACTATGCGTTGTTGCATATGTTTTGTTTTTATGGTAATGT
TAGTTCAGGTCTCTGGGTAGTTTTGTCGGGCAGCTGGTGTACAGGCTATT
GGCTTGTTTTGCTGTCTTGATTTGTAAACAACTTGGTAAGTAGTATTGGC
ATGGAAGAAATGGCATGTATCCTCTTGTTGTTTCTATCTATATAACAACA
TTTGGGTTTGTTTTGGCTGTAAATTTACTGATGCTAAGCTTAT
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