DY258606

Overview
NameDY258606
Unique NameDY258606
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length785
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY258606_ssr51 microsatellite DY258606_ssr51:51..62. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig1179 contig Ccv1_Contig1179:1..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258606 vs. ExPASy Swiss-Prot
Match: FKBP4_CRYNE (FK506-binding protein 4 OS=Cryptococcus neoformans GN=FPR4 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.863e-18
Identity = 58/148 (39.19%), Postives = 80/148 (54.05%), Query Frame = 3
Query:   84 KDSNMETHPLSMDAMSGSVMVTENSSAEGKLSLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 527
            K + +E         + +V     +  E K    +TLP+GL+I+ +  G  DG VA  GK++ + Y GKL  NG+ FD+N    P  F LG  EVI G + GL GM VG +RRL IP +L YG+       IP  S L+FDV LV ++
Sbjct:  263 KKAKVEGEKAEEKPAAAAVAEKPATKKEAKAPQKKTLPSGLIIEDIKIG--DGPVAKTGKRLGMRYIGKLT-NGKQFDANTSGKPFSFVLGKGEVIRGWDEGLAGMAVGGERRLTIPAALAYGN--QKIPGIPKNSTLKFDVKLVSIN 405          
BLAST of DY258606 vs. ExPASy Swiss-Prot
Match: FKB39_DROME (39 kDa FK506-binding nuclear protein OS=Drosophila melanogaster GN=FK506-bp1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 8.607e-18
Identity = 53/114 (46.49%), Postives = 69/114 (60.53%), Query Frame = 3
Query:  186 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 527
            RT+  G+ I     GK  G+ A  GK++SV Y G+L+ N + FDS L   P KF LGG EVI+G +VG+ GM VG KR +  PP + YG+ G   K I P S L F+V+L  VH
Sbjct:  247 RTITGGVKIVDQVVGK--GEEAKQGKRVSVYYIGRLQSNNKTFDSLLKGKPFKFALGGGEVIKGWDVGVAGMKVGGKRVITCPPHMAYGARGAPPK-IGPNSTLVFEVELKAVH 357          
BLAST of DY258606 vs. ExPASy Swiss-Prot
Match: FKBP4_SPOFR (46 kDa FK506-binding nuclear protein OS=Spodoptera frugiperda GN=FKBP46 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.917e-17
Identity = 49/113 (43.36%), Postives = 69/113 (61.06%), Query Frame = 3
Query:  186 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKV 524
            + +  G+ I+ L  G   G VA  GK + V Y G+LK+N ++FD+ +     KF LG KEVI G +VG+ GM VG KR+++ PP++ YG+ G     IPP S L F+VDL  V
Sbjct:  302 KQIAGGVSIEDLKVGS--GPVAKAGKVVMVYYEGRLKQNNKMFDNCVKGPGFKFRLGSKEVISGWDVGIAGMKVGGKRKIVCPPAMAYGAKGSPPV-IPPNSTLVFEVDLKNV 411          
BLAST of DY258606 vs. ExPASy Swiss-Prot
Match: FKBP2_CANGA (FK506-binding protein 2 OS=Candida glabrata GN=FPR2 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.504e-17
Identity = 50/95 (52.63%), Postives = 63/95 (66.32%), Query Frame = 3
Query:  249 AAPGKKISVLYTGKLKENGQVFDSNLG-STPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVHR 530
            A PG  +SV YTG L ENG+VFDS+L  + P++F LG  +VI G   G+ GM +GEKR L IPP L YGS G     IPP + L+FDV+LV + R
Sbjct:   42 ALPGDMVSVHYTGSLAENGKVFDSSLRRNEPIQFKLGAGQVIAGWEQGITGMCLGEKRTLHIPPELAYGSRGAGGV-IPPNAVLDFDVELVDIAR 135          
BLAST of DY258606 vs. ExPASy Swiss-Prot
Match: FKBP3_DEBHA (FK506-binding protein 3 OS=Debaryomyces hansenii GN=FPR3 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.579e-17
Identity = 50/113 (44.25%), Postives = 68/113 (60.18%), Query Frame = 3
Query:  186 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKV 524
            +TL  G+V +   TGK  G+ A  G K+ + Y GKLK NG+VFD N    P  F LG  E I+G ++G+ GM VG +RR++IPP +GYGS       +P  S L FD+ LV +
Sbjct:  329 KTLLGGVVTEDRKTGK--GQTAKSGNKVGIRYIGKLK-NGKVFDKNTSGKPFVFGLGKGECIKGFDLGVAGMAVGGERRVVIPPKMGYGS--QALPGLPANSELTFDIKLVSI 436          
BLAST of DY258606 vs. ExPASy Swiss-Prot
Match: FKBP4_SCHPO (FK506-binding protein 39 kDa OS=Schizosaccharomyces pombe GN=fkbp39 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.616e-16
Identity = 56/144 (38.89%), Postives = 75/144 (52.08%), Query Frame = 3
Query:   96 METHPLSMDAMSGSVMVTENSSAEGKLSLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKVH 527
            +E  P    A       + N+ +  K    RTL  G+V+  + TG   G  A  GKK+ + Y GKL ENG+VFD N    P  F LG  EVI G +VG+ GM  G +R++ IP  + YG+       IP  S L F+V LV+VH
Sbjct:  226 LEQGPTGPAAKKEKQQASSNAPSSPKT---RTLKGGVVVTDVKTGS--GASATNGKKVEMRYIGKL-ENGKVFDKNTKGKPFAFILGRGEVIRGWDVGVAGMQEGGERKITIPAPMAYGN--QSIPGIPKNSTLVFEVKLVRVH 361          
BLAST of DY258606 vs. ExPASy Swiss-Prot
Match: FKBP3_KLULA (FK506-binding protein 3 OS=Kluyveromyces lactis GN=FPR3 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.723e-16
Identity = 56/166 (33.73%), Postives = 79/166 (47.59%), Query Frame = 3
Query:   27 ELQPEXXXXXXXRRTEEDGKDSNMETHPLSMDAMSGSVMVTENSSAEGKLSLLRTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKV 524
            E + E         T+++ K    +      D   G     E    + +    + L  G++I+   TGK  GK    G K+ + Y GKLK NG+VFD N    P  F+LG  EVI+G ++G+ GM VG +RR++IP    YG        IP  S L FDV LV +
Sbjct:  257 EEEEEEEEQKLVEETKKNKKAKKEKKVEFKKDLEEGPTKKEEKKEEKKEKPKTKVLEGGIIIEDRVTGK--GKACKKGSKVGMRYIGKLK-NGKVFDKNTSGKPFVFNLGRGEVIKGWDIGVAGMAVGGERRIVIPAPYAYGK--QALPGIPANSELTFDVKLVSL 417          
BLAST of DY258606 vs. ExPASy Swiss-Prot
Match: FKBP4_DICDI (FK506-binding protein 4 OS=Dictyostelium discoideum GN=fkbp4 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.168e-16
Identity = 53/110 (48.18%), Postives = 66/110 (60.00%), Query Frame = 3
Query:  189 TLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLV 518
            TLP+GL  + L  G   G     GKK+ V Y GKL  NG+ FDS+L  TP  F +G +EVI G ++G+  M VG KRRL IP  L YG  G    +IPP + L FDV+LV
Sbjct:  256 TLPSGLQYEDLVVGS--GPSPKSGKKVGVKYIGKLT-NGKTFDSSL-RTPFTFRIGIREVIRGWDIGVASMKVGGKRRLTIPADLAYGRSG-APPSIPPNATLIFDVELV 360          
BLAST of DY258606 vs. ExPASy Swiss-Prot
Match: FKBP3_CANGA (FK506-binding protein 3 OS=Candida glabrata GN=FPR3 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.168e-16
Identity = 51/113 (45.13%), Postives = 64/113 (56.64%), Query Frame = 3
Query:  186 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKV 524
            RTL  G+VI+    G  DG  A  G ++ + Y GKLK NG+VFD N    P  F LG  EVI+G +VG+ GM VG +RR++IP    YG        IP  S L FDV LV +
Sbjct:  329 RTLEGGVVIEDRTVG--DGPAAKKGDRVGMRYIGKLK-NGKVFDKNTSGKPFVFKLGRGEVIKGWDVGVAGMSVGSERRIIIPAPYAYGK--QALPGIPANSELTFDVKLVSI 436          
BLAST of DY258606 vs. ExPASy Swiss-Prot
Match: FKBP3_CANAL (FK506-binding protein 3 OS=Candida albicans GN=FPR3 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.052e-15
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 3
Query:  186 RTLPNGLVIQKLGTGKPDGKVAAPGKKISVLYTGKLKENGQVFDSNLGSTPLKFHLGGKEVIEGLNVGLEGMHVGEKRRLLIPPSLGYGSGGDDSKNIPPYSWLEFDVDLVKV 524
            +TL  G++ +    G   G  A  G K+ + Y GKLK NG+VFD N    P  F LG  E I+G ++G+ GM VG +RR++IPP +GYGS       IP  S L FD+ LV +
Sbjct:  318 KTLLGGVITEDRKIGS--GATAKSGAKVGIRYIGKLK-NGKVFDKNTSGKPFSFKLGKGECIKGFDLGVTGMAVGGERRVIIPPKMGYGS--QALPGIPANSELTFDIKLVSL 425          
The following BLAST results are available for this feature:
BLAST of DY258606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
FKBP4_CRYNE3.863e-1839.19FK506-binding protein 4 OS=Cryptococcus neoformans... [more]
FKB39_DROME8.607e-1846.4939 kDa FK506-binding nuclear protein OS=Drosophila... [more]
FKBP4_SPOFR1.917e-1743.3646 kDa FK506-binding nuclear protein OS=Spodoptera... [more]
FKBP2_CANGA2.504e-1752.63FK506-binding protein 2 OS=Candida glabrata GN=FPR... [more]
FKBP3_DEBHA5.579e-1744.25FK506-binding protein 3 OS=Debaryomyces hansenii G... [more]
FKBP4_SCHPO3.616e-1638.89FK506-binding protein 39 kDa OS=Schizosaccharomyce... [more]
FKBP3_KLULA4.723e-1633.73FK506-binding protein 3 OS=Kluyveromyces lactis GN... [more]
FKBP4_DICDI6.168e-1648.18FK506-binding protein 4 OS=Dictyostelium discoideu... [more]
FKBP3_CANGA6.168e-1645.13FK506-binding protein 3 OS=Candida glabrata GN=FPR... [more]
FKBP3_CANAL1.052e-1542.48FK506-binding protein 3 OS=Candida albicans GN=FPR... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258606 ID=DY258606; Name=DY258606; organism=Citrus clementina; type=EST; length=785bp
GGAATGATGTTGATCTATCTGTTGCTGAACTTCAACCTGAGAAGAAGAAA
AAGAAGAAGAAGAGAAGAACTGAAGAGGATGGGAAGGATTCGAACATGGA
AACACATCCATTATCAATGGATGCAATGAGCGGATCTGTTATGGTCACTG
AGAACAGCAGTGCTGAAGGCAAGTTATCTCTGCTCAGGACCTTGCCTAAT
GGATTAGTCATTCAGAAGCTAGGAACAGGGAAACCAGATGGCAAGGTAGC
TGCACCCGGGAAAAAGATCAGTGTCCTTTATACTGGAAAGTTAAAGGAAA
ATGGACAAGTATTTGACTCAAATCTTGGGAGCACCCCCTTAAAGTTCCAC
TTAGGTGGAAAAGAAGTTATAGAGGGCTTGAATGTCGGACTTGAAGGTAT
GCATGTTGGTGAAAAGAGAAGGCTACTCATCCCTCCCTCTCTAGGTTACG
GAAGTGGAGGAGATGATAGTAAGAATATTCCACCTTACTCATGGCTGGAA
TTTGATGTCGACTTGGTCAAAGTCCATCGATAGTTTTGCTCCACTGCTTG
TTTCCCATGTCAACATACTGTTTTGCATGCAGATTTTGGTTTGAAGAGCA
GGCTCACGGCGTTCAAAATCTTGAGAATTTTTGTGACGTAAATTTTGCCT
CAAGAAAACCGGGAATCTGTTTCTTCTACATCAACTAAACCTTGAGAATT
TCATTTATTGAATTTTTTTGCCGCGGAAAGCTGGGGTTCTGTTTTCTTGT
CAACAAATGCTTGCTGTAGCTACTGATTTGACTTC
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