DY258641

Overview
NameDY258641
Unique NameDY258641
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1314
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_GOSHI (V-type proton ATPase catalytic subunit A OS=Gossypium hirsutum GN=CVA69.24 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.853e-23
Identity = 42/68 (61.76%), Postives = 47/68 (69.12%), Query Frame = 3
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAGKVKCLG P+RTG VTIVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  383 ARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSI-VQVFWGLDKKLAQRKHFP 449          

HSP 2 Score: 53.5286 bits (127), Expect = 7.853e-23
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 2
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFLS 511
            F + GYNVSMM DSTSRW EAL +IS RLA+MPA + Y  +L+
Sbjct:  340 FRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLA 382          
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_CITUN (V-type proton ATPase catalytic subunit A OS=Citrus unshiu PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.853e-23
Identity = 42/68 (61.76%), Postives = 47/68 (69.12%), Query Frame = 3
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAGKVKCLG P+RTG VTIVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  383 ARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSI-VQVFWGLDKKLAQRKHFP 449          

HSP 2 Score: 53.5286 bits (127), Expect = 7.853e-23
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 2
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFLS 511
            F + GYNVSMM DSTSRW EAL +IS RLA+MPA + Y  +L+
Sbjct:  340 FRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLA 382          
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_PHAAU (V-type proton ATPase catalytic subunit A OS=Phaseolus aureus PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 2.927e-22
Identity = 41/68 (60.29%), Postives = 46/68 (67.65%), Query Frame = 3
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+R GKVKCLG P+RTG VTIVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  383 ARLASFYERPGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSI-VQVFWGLDKKLAQRKHFP 449          

HSP 2 Score: 53.5286 bits (127), Expect = 2.927e-22
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 2
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFLS 511
            F + GYNVSMM DSTSRW EAL +IS RLA+MPA + Y  +L+
Sbjct:  340 FRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLA 382          
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_DAUCA (V-type proton ATPase catalytic subunit A OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.927e-22
Identity = 41/68 (60.29%), Postives = 46/68 (67.65%), Query Frame = 3
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAGKVKCLG P+R G VTIVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  383 ARLASFYERAGKVKCLGGPERNGSVTIVGAVSPPGGDFSDPVTSATLSI-VQVFWGLDKKLAQRKHFP 449          

HSP 2 Score: 53.5286 bits (127), Expect = 2.927e-22
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 2
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFLS 511
            F + GYNVSMM DSTSRW EAL +IS RLA+MPA + Y  +L+
Sbjct:  340 FRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLA 382          
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_BRANA (V-type proton ATPase catalytic subunit A OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.927e-22
Identity = 41/68 (60.29%), Postives = 46/68 (67.65%), Query Frame = 3
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAGKVKCLG P+R G VTIVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  383 ARLASFYERAGKVKCLGGPERNGSVTIVGAVSPPGGDFSDPVTSATLSI-VQVFWGLDKKLAQRKHFP 449          

HSP 2 Score: 53.5286 bits (127), Expect = 2.927e-22
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 2
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFLS 511
            F + GYNVSMM DSTSRW EAL +IS RLA+MPA + Y  +L+
Sbjct:  340 FRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLA 382          
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_ARATH (V-type proton ATPase catalytic subunit A OS=Arabidopsis thaliana GN=VHA-A PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.927e-22
Identity = 41/68 (60.29%), Postives = 46/68 (67.65%), Query Frame = 3
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAGKVKCLG P+R G VTIVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  383 ARLASFYERAGKVKCLGGPERNGSVTIVGAVSPPGGDFSDPVTSATLSI-VQVFWGLDKKLAQRKHFP 449          

HSP 2 Score: 53.5286 bits (127), Expect = 2.927e-22
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 2
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFLS 511
            F + GYNVSMM DSTSRW EAL +IS RLA+MPA + Y  +L+
Sbjct:  340 FRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLA 382          
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_MAIZE (V-type proton ATPase catalytic subunit A (Fragment) OS=Zea mays PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.816e-22
Identity = 41/68 (60.29%), Postives = 46/68 (67.65%), Query Frame = 3
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAGKVKCLG+P R G VTIVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  321 ARLASFYERAGKVKCLGSPDRNGSVTIVGAVSPPGGDFSDPVTSATLSI-VQVFWGLDKKLAQRKHFP 387          

HSP 2 Score: 53.5286 bits (127), Expect = 3.816e-22
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 2
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFLS 511
            F + GYNVSMM DSTSRW EAL +IS RLA+MPA + Y  +L+
Sbjct:  278 FRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLA 320          
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_HORVU (V-type proton ATPase catalytic subunit A (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.454e-22
Identity = 40/68 (58.82%), Postives = 47/68 (69.12%), Query Frame = 3
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            +RLAS Y+RAGKV+CLG+P RTG VTIVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  340 SRLASFYERAGKVQCLGSPDRTGSVTIVGAVSPPGGDFSDPVTSATLSI-VQVFWGLDKKLAQRKHFP 406          

HSP 2 Score: 53.5286 bits (127), Expect = 6.454e-22
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 2
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFLS 511
            F + GYNVSMM DSTSRW EAL +IS RLA+MPA + Y  +L+
Sbjct:  297 FRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLA 339          
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_ANOGA (V-type proton ATPase catalytic subunit A OS=Anopheles gambiae GN=Vha68-2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.877e-21
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 3
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAG+VKCLG P+R G V+IVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  377 ARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGI-VQVFWGLDKKLAQRKHFP 443          

HSP 2 Score: 53.1434 bits (126), Expect = 6.877e-21
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 2
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F + GYNVSMM DSTSRW EAL +IS RLA+MPA + Y  +L
Sbjct:  334 FRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL 375          
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_AEDAL (V-type proton ATPase catalytic subunit A OS=Aedes albopictus GN=VhaA PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.877e-21
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 3
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAG+VKCLG P+R G V+IVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  377 ARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGI-VQVFWGLDKKLAQRKHFP 443          

HSP 2 Score: 53.1434 bits (126), Expect = 6.877e-21
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 2
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F + GYNVSMM DSTSRW EAL +IS RLA+MPA + Y  +L
Sbjct:  334 FRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL 375          
The following BLAST results are available for this feature:
BLAST of DY258641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
VATA_GOSHI7.853e-2361.76V-type proton ATPase catalytic subunit A OS=Gossyp... [more]
VATA_CITUN7.853e-2361.76V-type proton ATPase catalytic subunit A OS=Citrus... [more]
VATA_PHAAU2.927e-2260.29V-type proton ATPase catalytic subunit A OS=Phaseo... [more]
VATA_DAUCA2.927e-2260.29V-type proton ATPase catalytic subunit A OS=Daucus... [more]
VATA_BRANA2.927e-2260.29V-type proton ATPase catalytic subunit A OS=Brassi... [more]
VATA_ARATH2.927e-2260.29V-type proton ATPase catalytic subunit A OS=Arabid... [more]
VATA_MAIZE3.816e-2260.29V-type proton ATPase catalytic subunit A (Fragment... [more]
VATA_HORVU6.454e-2258.82V-type proton ATPase catalytic subunit A (Fragment... [more]
VATA_ANOGA6.877e-2157.35V-type proton ATPase catalytic subunit A OS=Anophe... [more]
VATA_AEDAL6.877e-2157.35V-type proton ATPase catalytic subunit A OS=Aedes ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DA10FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258641 ID=DY258641; Name=DY258641; organism=Citrus clementina; type=EST; length=1314bp
TTTTCACCTCCTTATGCAATTTCTCAGATTAGTAAACTGATGGGATTGAT
GGTAATAATAATTTTGTTTATTGTCTTTTTGCCCTGCATGGGGGAAGACA
AAAAGTTGTAAGTTTACGAATTTACATTCCAATCAGTAGAAAAGAAAAAG
GGTTATTCTTTAGACGTACAGGGTTTTTATATGTACATGGTCGTACTTAA
AGGTCTAGTTGTCATTTTTCTTATATAATGTATTATGTGTGAACACATAG
ATAATCACATTAAATTTAAAACAAAAAAAAAAATAAAAAAAACCCTACAT
ATACTTGCTGGAAAATGGTTTTATTATAAAGCATTGTTCTCTTGATTGTT
GCATCGAACCGGTAATCATCAGACAAAAATAATTCATAAATAGGGGGTAC
AATGTTAGCATGATGGAAGATTCAACTTCTCGTTGGTAAGAAGCGTTGAG
TAAAATTTCAAGACGGCTGGCAAAAATGCCTGCATATAATGAATATCATG
AATTCCTGTCATGCACGTTTGGCCTCAATATATAAACGTGCTGGGAAAGT
TAAATGTCTTGGTGCACCAAAACGTACAGGTATTGTCACAATTGTAGGTG
CAGTTTCTCCTCCTGAAAGAGAATTCTCAAAAACTGTAACTTCTTGCCAG
CCTCCCCATTGAGCAAGTCCTATCTAGGGTTAAGAAAAAAAAAATACCCA
AAAAAAGCATTTTCCCTTCTGTAAAATGGATTAATACTAAATCGAAATTA
TTCAACACCATTAAAATCTTTCCTTAAAACCAATTTAATCCGAAATTTTA
TTAAAACAAAGGAAAAAAGCTTGTAGGGGTGAAAACAAAAAAAAAATTAA
TCTAATAGTACTTTCTCACCTCGCTACAATAAGTAAGTTTTAGCTAAAAC
GATACACAAATCACCCAAAAAACTACAAAAGCTTTTTCAAGGACGGACTC
TCCTTATCCCATAAGAAATTATCTCCCAAAATAACAGCCTCCTCCCCTTT
CTTTTCACGTATTTTTTGGTAAAATACCCTAAAAATCTAACATCCTAATT
ATATAAATTCCACAAAAATAGAGATATACAAAAAAAAATAAAGCCATACA
ACTTCAAATGAAAACAAAAAAAAAACATTTTAATATCCTAACACTATTAT
GCTAAATGCATCCAATACGAAATAACTTCTTTTGATGAAAAAAAATCCTC
AAACCCCCACAAAACTATCTTCTCAAGACACCATCCCCAATCATCGAAGA
ACACATAAGAACACACATATCCTTATTTCTTTTCTTGTTTTTTTCACTAT
AATCATTAAAACAA
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