DY258642

Overview
NameDY258642
Unique NameDY258642
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1153
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14255 contig Ccv1_Contig14255:402..1555. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY258642 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 1.464e-68
Identity = 119/234 (50.85%), Postives = 165/234 (70.51%), Query Frame = 1 
Query:    7 LSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 708
            ++ DKV++  W+ LKD +LEG + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T +VDV            SKYP IKGINFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP++GKV++    LP  PDS+ A++    +D I L   P G+ERT++EF ALA  AGF+G N  C+  N+YV+EF K
Sbjct:  130 MNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363
[Close]
BLAST of DY258642 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.912e-68
Identity = 118/234 (50.43%), Postives = 165/234 (70.51%), Query Frame = 1 
Query:    7 LSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 708
            ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + K+ ++Y+GFQ +T LVDV            SKYP I+ INFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K+L+NCY ALPN+GKV++    LPEVPDS+ A++    +D I +   P G+ERT+KEF ALA  AGF+G    CN  N+Y++EF K
Sbjct:  106 MNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339
[Close]
BLAST of DY258642 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.912e-68
Identity = 118/234 (50.43%), Postives = 165/234 (70.51%), Query Frame = 1 
Query:    7 LSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 708
            ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + K+ ++Y+GFQ +T LVDV            SKYP I+ INFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K+L+NCY ALPN+GKV++    LPEVPDS+ A++    +D I +   P G+ERT+KEF ALA  AGF+G    CN  N+Y++EF K
Sbjct:  106 MNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339
[Close]
BLAST of DY258642 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 3.261e-68
Identity = 118/234 (50.43%), Postives = 165/234 (70.51%), Query Frame = 1 
Query:    7 LSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 708
            ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFNNGM   ++  + KI+E+YKGF+ +T LVDV            SKYP++KGINFD+PHVI+DA S+PG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY++LP DGKV++    LPE PDS+ +++    +D I L   P G+ERT+KEF ALA  +GFKGI   C+     ++E  K
Sbjct:  128 MNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361
[Close]
BLAST of DY258642 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 4.258e-68
Identity = 119/234 (50.85%), Postives = 162/234 (69.23%), Query Frame = 1 
Query:    7 LSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 708
            ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+Y GF+ +  LVDV            SKYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  IP+ DA+ MKW+ H++ DE+C+K L+NCY+ALP++GKV+V    LP  PDS+ A++    +D I L   P G+ERT+KEF  LA  AGF+G    CN  N+Y+MEF K
Sbjct:  130 MNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363
[Close]
BLAST of DY258642 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 7.264e-68
Identity = 116/234 (49.57%), Postives = 165/234 (70.51%), Query Frame = 1 
Query:    7 LSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 708
            ++ DKV++  W+ LKD +L+G + +NKA GM  +DY GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T +VDV            SKYP IKGINFD+PHVI+DA  YPG++HVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP++GKV++    LP  PD++ A++    +D + L   P G+ERT++EF ALA  +GF+GI   CN  N+YV+EF K
Sbjct:  130 MNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363
[Close]
BLAST of DY258642 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 4.708e-67
Identity = 121/234 (51.71%), Postives = 158/234 (67.52%), Query Frame = 1 
Query:    7 LSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 708
            ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI E Y GF+ +  +VDV            +KYP IKGINFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP  GKV+V    LP  PD + A++    +DAI L   P G+ERT+KEF ALAI AGFKG    C   N+YVMEF K
Sbjct:  135 MNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368
[Close]
BLAST of DY258642 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 3.052e-66
Identity = 116/234 (49.57%), Postives = 162/234 (69.23%), Query Frame = 1 
Query:    7 LSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 708
            ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y G D RFN+VFN+GM   ++  + KIVE Y GF  +  LVDV            SK+  +KGINFD+PHVI DA++Y G+EHVGGDM++ +P+GDAI MKW+LH++ D +C+++L+NCYK+LP +GKV+V    LPE PD+T A+++   +D I L   P G+ERT+KEF ALA  AGFKG N      N++VMEF K
Sbjct:  121 MNQDKVLMESWYYLKDPVLDGGIPFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITSKHKSLKGINFDLPHVIADATTYQGIEHVGGDMFESVPKGDAIFMKWILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354
[Close]
BLAST of DY258642 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 3.052e-66
Identity = 117/234 (50.00%), Postives = 160/234 (68.38%), Query Frame = 1 
Query:    7 LSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 708
            ++ DKV+M  W+ LKD ILEG + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T LVDV            SKYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  +P  DA+ MKW+ H++ D +C+K L+NCY ALP +GKV+++   LP  PD++ A++    +D I L   P G+ERT+KEF  LA  AGF+G    C   N++V+EF K
Sbjct:  130 MNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363
[Close]
BLAST of DY258642 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 3.986e-66
Identity = 116/234 (49.57%), Postives = 163/234 (69.66%), Query Frame = 1 
Query:    7 LSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 708
            ++ DKV+M  W+ LKD +LEG + +NKA GM  ++Y G D RFN+VFN GM   ++ ++ KI+E Y+GFQ +  +VDV            SKYP IKGINFD+PHVI+DA SYPG++HVGGDM+  +P+GDAI MKW+ H++ D +C+K L+NC++ALP +GKV++    LPE PDST +++++  +D I L   P G+ERT+KEF ALA  AGF+G    C   NS++ME  K
Sbjct:  130 MNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363
The following BLAST results are available for this feature:
BLAST of DY258642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
COMT1_PRUDU1.464e-6850.85Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
OMT2_CHRAE1.912e-6850.43Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE1.912e-6850.43Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
OMT1_ARATH3.261e-6850.43Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_MEDSA4.258e-6850.85Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_ROSCH7.264e-6849.57Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_CLABR4.708e-6751.71Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_ZINEL3.052e-6649.57Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_POPKI3.052e-6650.00Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_CATRO3.986e-6649.57Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DA12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258642 ID=DY258642; Name=DY258642; organism=Citrus clementina; type=EST; length=1153bp
ATGAACTTGTCTCTTGACAAAGTAATGATGCCTGGCTGGTTCCAATTGAA
AGACCAAATTCTTGAAGGAGAACTTTCGTATAATAAAGCCCTCGGAATGG
ATTTCTACGATTATCTGGGCACCGACTCCAGGTTCAATGAAGTTTTCAAC
AATGGAATGATCGGCCAGACTTCTTTTGTAATCAATAAGATTGTAGAATC
CTACAAAGGCTTTCAGAATATTACGCGCCTTGTTGACGTTGGCGGTGGTT
TAGGAATCACCCTTGCGACCATAATTTCCAAATACCCTCATATTAAGGGT
ATTAATTTTGACGTACCTCATGTTATAAAAGATGCCTCATCTTATCCCGG
CATGGAACATGTTGGCGGAGATATGTACCAAAAAATTCCAGAGGGGGATG
CCATTTTAATGAAGTGGATGCTTCATAATTTTGATGATGAGAATTGCATA
AAGATACTGAGGAATTGTTACAAAGCTCTTCCAAATGATGGAAAGGTACT
TGTTATTAACTCAACGTTGCCAGAAGTGCCTGACAGTACCGAGGCTTCAA
GGGATTCCTTCATTTTAGATGCAATTTTTTTAATCCAAATTCCTCATGGA
AGGGAGCGGACCAAAAAGGAGTTCACTGCATTGGCAATCGAAGCTGGATT
TAAGGGTATCAACTTTGAATGTAACGTTTGCAATTCCTATGTCATGGAAT
TCTACAAGTAACTTTGAAGCTAGATTGCTTCATTCTTTCTTTATCAGAAA
GATGCATCTTCTCATTTTTAATTTGGAGTGTCGATACTCCTTTTTCTTTT
CTGTAACTTTCTGTTTTGTTTGGCCTTTATGGCTCGCGGGAACTTCTTAT
GTAATGCTTTTTGGTGTTCAAAAATATAAGTTCCTGTTTGGGTTTGGAAT
AAAAAAAAAAAAAAAAAAACCCAATTTTTTTTGTAAAAAGTTGGGATTTA
AAAAAAAACTTTGCTTATTAATTTTTTTGCAACCAAAAGGGTCCCCTTTC
ACTCAAAAAAAAAATCTTTTTTTGCCCCCCCCCCTTAAAACCCCCCTAAA
AGGGAACCCAAATTAAAAGGGGCCAAAACCCGTTTTTCCCGGGGCCCCCC
TCGCGCCCCGGGGTTCCCAAAAAAACCTCTCTAAAAGTTTTCCTTTTTGC
CCC
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