DY258649

Overview
NameDY258649
Unique NameDY258649
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length875
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.077e-83
Identity = 140/240 (58.33%), Postives = 188/240 (78.33%), Query Frame = 1
Query:    7 AMKTGEAAKDDLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPDFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFELSASYVHAPHAFIFLQPQHGAHLILRKL 726
            A+K GE  +DDLLG+L+ESN++EI++ GN K  G+S +DVI+ECKLFYFAGQETT VLL WT +LLSKH +WQ  AREEVLQ FG  KP+F+ LN LK V MI YEVLRLYPP+  L++ V K+TK+G   +PA + + L T+++H +K +WG+DA EF P RF +G++ ATKN V+Y PF+WGPR+C+GQNFAL++AK+ +AMILQ F F+++ SYVHAP   + +QPQ G+H+I +KL
Sbjct:  283 ALKAGEPGEDDLLGVLLESNIQEIQKQGNKKDGGMSINDVIEECKLFYFAGQETTGVLLTWTTILLSKHPEWQERAREEVLQAFGKNKPEFERLNHLKYVSMILYEVLRLYPPVIDLTKIVHKDTKLGSYTIPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLGLAMILQRFKFDVAPSYVHAPFTILTVQPQFGSHVIYKKL 522          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP3AC_CANFA (Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A12 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.102e-31
Identity = 79/216 (36.57%), Postives = 124/216 (57.41%), Query Frame = 1
Query:    1 EIAMKTGEAAKDDLLGLLMES-NLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKK-PDFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            E  +K  +  + D L L++ S N KE+  H     K +S  +++ +  +F FAG ETTS  L + M  L+ H D Q   +EE+   F +K  P +D L +++ + M+  E LRLYP    L R  +K+ +I  + +P  +V+ + T  +H D+ LW  + +EF+PERFS   +K + N  +Y PF  GPR CIG  FA++  K+A+  +LQNFSF+
Sbjct:  258 ESRLKDKQKHRVDFLQLMINSQNSKEMDTH-----KALSDLELVAQSIIFIFAGYETTSTSLSFLMYELATHPDVQQKLQEEIDATFPNKALPTYDALVQMEYLDMVLNETLRLYPIAGRLERVCKKDVEISGVFIPKGTVVMVPTFTLHRDQSLW-PEPEEFRPERFSRK-NKDSINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQNFSFK 466          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.021e-30
Identity = 78/204 (38.24%), Postives = 118/204 (57.84%), Query Frame = 1
Query:   37 DLLGLLMES-NLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPD-FDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            DLL L++ S N KE+  H     K +S ++++ +  +F FAG ETTS  L      L+ H D Q   +EE+   F +K P  +D L +++ + M+  E LRLYP    L R  +K+ +I  + +P  +V+ +   ++H D  LW  + +EF+PERFS+   K T N  +Y PF  GPR CIG  FAL+  K+A+  +LQNFSF+
Sbjct:  270 DLLQLMINSQNSKEMDPH-----KSLSNEELVAQGIIFIFAGYETTSSALSLLAYELATHPDVQQKLQEEIEATFPNKAPPTYDALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLW-PEPEEFRPERFSKK-HKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP3AR_ONCMY (Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp3a27 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.806e-29
Identity = 68/204 (33.33%), Postives = 117/204 (57.35%), Query Frame = 1
Query:   37 DLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKP-DFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFEL 645
            D L L+++S      + G  + KG++  +++ +  +F FAG ET+S  + +    L+ +       +EE+  VF +K P  ++ L ++  +  +  E LRLYP  P L R  +K  +I  +++P + ++ + T  +H D ++W  D +EFKPERFS+  +K + +  +Y PF  GPR CIG  FAL+  K+AM  ILQ+F+F +
Sbjct:  271 DFLQLMIDSQKGSDTKTGEEQTKGLTDHEILSQAMIFIFAGYETSSSTMSFLAYNLATNHHVMTKLQEEIDTVFPNKAPIQYEALMQMDYLDCVLNESLRLYPIAPRLERVAKKTVEINGIVIPKDCIVLVPTWTLHRDPEIW-SDPEEFKPERFSKE-NKESIDPYTYMPFGAGPRNCIGMRFALIMIKLAMVEILQSFTFSV 472          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP3A5_HUMAN (Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.583e-29
Identity = 75/204 (36.76%), Postives = 120/204 (58.82%), Query Frame = 1
Query:   37 DLLGLLMES-NLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPD-FDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            D L L+++S N KE + H     K +S  ++  +  +F FAG ETTS +L +T+  L+ H D Q   ++E+  V  +K P  +D + +++ + M+  E LRL+P    L R  +K+ +I  + +P  S++ + T  +HHD K W  + +EF+PERFS+   K + +   Y PF  GPR CIG  FAL+  K+A+  +LQNFSF+
Sbjct:  270 DFLQLMIDSQNSKETESH-----KALSDLELAAQSIIFIFAGYETTSSVLSFTLYELATHPDVQQKLQKEIDAVLPNKAPPTYDAVVQMEYLDMVVNETLRLFPVAIRLERTCKKDVEINGVFIPKGSMVVIPTYALHHDPKYW-TEPEEFRPERFSK--KKDSIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFK 465          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.293e-28
Identity = 74/216 (34.26%), Postives = 123/216 (56.94%), Query Frame = 1
Query:    1 EIAMKTGEAAKDDLLGLLMES-NLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPD-FDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            E  +K  +  + D L L++ S N KE   H     K +S  +++ +  +F FAG ETTS  L + + +L+ H D Q   +EE+   F +K P  +D L +++ + M+  E LR++P    L R  +K+ +I  + +P  + + +   ++H D +LW  + +EF+PERFS+  +K + N   Y PF  GPR CIG  FA++  K+A+  +LQNFSF+
Sbjct:  258 ESRLKDNQKPRVDFLQLMINSQNSKETDNH-----KALSDQELMAQSVIFIFAGYETTSNTLSFLLYILATHPDVQQKLQEEIDATFPNKAPPTYDVLAQMEYLDMVVNETLRMFPIAVRLDRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLW-PEPEEFRPERFSKK-NKDSINPYVYLPFGTGPRNCIGMRFAIMNMKLAIVRVLQNFSFK 466          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP3AG_MOUSE (Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.763e-28
Identity = 71/203 (34.98%), Postives = 118/203 (58.13%), Query Frame = 1
Query:   37 DLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPD-FDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            D + L+ME+  K   +  +   K +S  ++  +  +F FAG ETTS +L +T+  L+ H D Q   +EE+ +   +K P  +D +  ++ + M+  E LRLYP    L R  +K+ +I  + +P  S + + + ++HHD + W  + +EF+PERFS+  +K + +   Y PF  GPR CIG  FAL+  K+A+  +LQNFSF+
Sbjct:  270 DFIYLMMEAYNKSKDKDSH---KALSEIEITAQSIIFIFAGYETTSSILSFTVYSLATHPDIQKKLQEEIDEALPNKAPPTYDTVMAMEYLDMVLNETLRLYPITNRLQRVCKKDVEINGIYIPKGSTVIIPSYVLHHDPQHW-PEPEEFQPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALIKVLQNFSFQ 467          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP3AD_MOUSE (Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.763e-28
Identity = 75/215 (34.88%), Postives = 119/215 (55.35%), Query Frame = 1
Query:    1 EIAMKTGEAAKDDLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKP-DFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            E  MK  E  + D L L++ S   + KE      K +S  +++ +  +F FAG ETTS  L + + LL+ H D Q   ++E+     +K P  +D L +++ + M+  E LRLYP    L R  + + +I  L +P  +V+ + T  +H D K W  + +EF+PERFS+  ++ + N   Y PF  GPR CIG  FAL+  K+A+  +LQNF+ +
Sbjct:  258 ENRMKEKEKQRVDFLQLMINSQNYKTKESH----KALSDVEIVAQSVIFIFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAALPNKAPATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYW-PEPEEFRPERFSKK-NQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQ 466          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.763e-28
Identity = 70/225 (31.11%), Postives = 123/225 (54.67%), Query Frame = 1
Query:   10 MKTGEAAKDDLLGLLMESNLKEIKEHGNNK----------LKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPDFDGLNRLKIVQMIFYEVLRLYPPLPVL-SRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFELSA 651
            ++ GE A  D + L +++  ++++  G N            + ++ ++++ +C +F  AG +TT++ L +   LL+ H + Q   +EEV +   + +   D L++LK ++ +F E LRLYP      SR   + TK+G++ +   ++I + T  +H D  +WGDDA++FKPER+    S     +  Y PF  GPR CIG   A +E K+ +  IL+ F+FE  A
Sbjct:  270 IEIGEPA--DFIDLFLDAKAEDVEHFGENNGDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECPNPEVTIDQLSKLKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFETGA 492          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.420e-28
Identity = 69/187 (36.90%), Postives = 110/187 (58.82%), Query Frame = 1
Query:  103 KGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPDFDGLNRLKIVQMIFYEVLRLYPPLPVL-SRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFELSASYV 660
            K ++ D++I +  +F  AG +TT++ L ++  LL+ H + Q   +EEV +   D +  FD L++LK ++ +  E LRLYP   ++ +R   K T +  + + A + I + T  +HHD K+WGDD  EFKPER+  G  +    +  Y PF  GPRICIG   A++E KM +  IL+N++FE +   V
Sbjct:  309 KHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDRECPDPEVTFDQLSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESG-DELFFAKGGYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFETTPETV 494          
The following BLAST results are available for this feature:
BLAST of DY258649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 460
Match NameE-valueIdentityDescription
C72A1_CATRO1.077e-8358.33Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
CP3AC_CANFA8.102e-3136.57Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A1... [more]
CP3AT_PIG4.021e-3038.24Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
CP3AR_ONCMY5.806e-2933.33Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp... [more]
CP3A5_HUMAN7.583e-2936.76Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1... [more]
CP3AO_SHEEP1.293e-2834.26Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
CP3AG_MOUSE3.763e-2834.98Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE... [more]
CP3AD_MOUSE3.763e-2834.88Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE... [more]
C13A1_CAEEL3.763e-2831.11Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]
C13A7_CAEEL6.420e-2836.90Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DC07FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258649 ID=DY258649; Name=DY258649; organism=Citrus clementina; type=EST; length=875bp
GAGATAGCAATGAAAACAGGGGAAGCTGCAAAAGATGACTTATTGGGTTT
ACTTATGGAATCCAATCTCAAAGAAATTAAAGAACATGGAAACAACAAAC
TTAAAGGGATCAGCAGAGACGATGTTATCGATGAGTGTAAGCTATTTTAC
TTTGCTGGGCAAGAGACTACTTCAGTTTTGCTTCTTTGGACAATGGTTTT
GTTGAGCAAGCATCAAGACTGGCAAGCACATGCAAGAGAAGAGGTTTTGC
AAGTCTTTGGTGATAAGAAACCTGACTTCGATGGATTGAATCGCCTCAAA
ATCGTTCAAATGATCTTCTACGAGGTACTCAGGCTGTACCCACCTTTGCC
TGTACTTTCTCGATACGTTGAAAAGGAAACGAAAATCGGGGACTTGATAT
TACCAGCTGAATCAGTGATCGCATTGCAAACTCTCTTGGTTCACCATGAT
AAAAAACTTTGGGGTGACGATGCAAAAGAGTTTAAACCTGAGAGGTTTTC
AGAAGGAATTTCAAAGGCAACAAAAAATCAAGTTTCTTATTTCCCATTTG
CATGGGGTCCTAGAATATGCATTGGGCAAAACTTTGCCCTGGTTGAAGCA
AAAATGGCCATGGCAATGATTCTGCAGAATTTCTCCTTCGAGTTGTCTGC
ATCCTATGTTCATGCTCCTCATGCGTTTATATTCCTCCAGCCACAACATG
GAGCTCACCTGATTTTACGGAAATTATAGAGCTTTATAAACTCTCAGTTG
CAAAATAAAATTCTTATGATCGGAAAACAATGTATCAGTTATGATAATAT
AGTATAAATTTGATAAATTAATACTTGATAAAAAAAAAAAAAAAAAAAAA
CCCAACTTTTCTGGACAAAGTGGGA
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