DY258653

Overview
NameDY258653
Unique NameDY258653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1218
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY258653_ssr1054 microsatellite DY258653_ssr1054:1054..1065. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig1195 contig Ccv1_Contig1195:1..1218. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AAT1_ARATH (Aspartate aminotransferase, mitochondrial OS=Arabidopsis thaliana GN=ASP1 PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 1.677e-72
Identity = 118/143 (82.52%), Postives = 129/143 (90.21%), Query Frame = 2
Query:  473 FREYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEK 901
            F EYLPMGGS KMV+ TLKLAYGDNSEFIKDKRIAAVQ+LSGTGACRLFADFQKRF P SQIYIPVPTWSNHHNIW+DA V  +T+HYYHP TKGLDF+ALMDD+KNAP GSFFLLHACAHNPTGVDP+++QW+EIS   K K
Sbjct:   92 FMEYLPMGGSAKMVDLTLKLAYGDNSEFIKDKRIAAVQTLSGTGACRLFADFQKRFSPGSQIYIPVPTWSNHHNIWKDAQVPQKTYHYYHPETKGLDFSALMDDVKNAPEGSFFLLHACAHNPTGVDPTEEQWREISQLFKAK 234          

HSP 2 Score: 37.7354 bits (86), Expect = 1.677e-72
Identity = 19/41 (46.34%), Postives = 26/41 (63.41%), Query Frame = 1
Query:  892 KGKRHFPILGMA*QVFARGDPEKNAQAIPIFSQGGPLIWIN 1014
            K K+HF    MA Q FA GDP ++A++I IF + G  I I+
Sbjct:  232 KAKKHFAFFDMAYQGFASGDPARDAKSIRIFLEDGHHIGIS 272          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AATM_DICDI (Aspartate aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=aatA PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.153e-39
Identity = 73/142 (51.41%), Postives = 95/142 (66.90%), Query Frame = 2
Query:  479 EYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEKG 904
            EY P+ G     +   +LA G+  + IK+KRIA VQS+SGTGA R+ ADF  RF      Y+P PTW NH+ I+ DA +  +++ YY+P T GL+F A+  DI  AP GS  LLHACAHNPTGVDP+ +QWK+IS   KE+G
Sbjct:   90 EYAPIVGVAAFNQLAAQLALGEECKHIKEKRIATVQSISGTGALRIAADFFARFLKGKTAYVPNPTWGNHNVIFNDAGIPVKSYGYYNPATCGLNFEAMTKDIAAAPEGSIILLHACAHNPTGVDPTAEQWKKISEICKERG 231          

HSP 2 Score: 31.9574 bits (71), Expect = 4.153e-39
Identity = 15/35 (42.86%), Postives = 21/35 (60.00%), Query Frame = 1
Query:  892 KGKRHFPILGMA*QVFARGDPEKNAQAIPIFSQGG 996
            K + HF +   A Q FA G PEK+A A+ +F + G
Sbjct:  228 KERGHFVLFDFAYQGFASGSPEKDAAAVRMFVEDG 262          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AAT5_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 8.748e-35
Identity = 69/146 (47.26%), Postives = 94/146 (64.38%), Query Frame = 2
Query:  476 REYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEKGTSP 913
            +EYLP+ G     + T +L +G     IK++R+A +Q LSGTG+ RL A   +R+ P +++ I  PTW NH NI+ DA V    + YY P T GLDF  ++ DIK AP GSF LLH CAHNPTG+DP+ +QW +I+  I+EK   P
Sbjct:  114 KEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFPGAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILLHGCAHNPTGIDPTPEQWVKIADVIQEKNHIP 259          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AATC_ORYSJ (Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.143e-34
Identity = 67/146 (45.89%), Postives = 98/146 (67.12%), Query Frame = 2
Query:  476 REYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEKGTSP 913
            +EYLP+ G     + + KL +G +S  I++ R+A VQ LSGTG+ R+  +F  R + +  IYIP PTW NH  ++  A +T R++ YY P T+GLDF  L++D+ +AP+G+  LLHACAHNPTGVDP+ DQW++I   ++ K   P
Sbjct:   69 KEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHYHERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAIVLLHACAHNPTGVDPTLDQWEQIRQLMRSKALLP 214          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AATM_LUPAN (Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 5.670e-34
Identity = 68/146 (46.58%), Postives = 95/146 (65.07%), Query Frame = 2
Query:  476 REYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEKGTSP 913
            +EYL + G     + T +L  G ++  IK +R+A VQ LSGTG+ RL A   +R+ P +++ I  PTW NH NI+ DA V    + YY P T GLDF  +++DIK AP G+F LLH CAHNPTG+DP+ +QW++I+  I+EK   P
Sbjct:  115 KEYLAIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFPGAKVLISAPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKAAPEGTFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 260          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AATM_HUMAN (Aspartate aminotransferase, mitochondrial OS=Homo sapiens GN=GOT2 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 5.670e-34
Identity = 68/143 (47.55%), Postives = 95/143 (66.43%), Query Frame = 2
Query:  476 REYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQ-IYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEK 901
            +EYLP+GG  +  + + +LA G+NSE +K  R   VQ++SGTGA R+ A F +RF   S+ +++P PTW NH  I+RDA +  + + YY P T G DF   ++DI   P  S  LLHACAHNPTGVDP  +QWKEI+  +K++
Sbjct:   94 KEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKR 236          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AATM_MOUSE (Aspartate aminotransferase, mitochondrial OS=Mus musculus GN=Got2 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.263e-33
Identity = 67/143 (46.85%), Postives = 96/143 (67.13%), Query Frame = 2
Query:  476 REYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQ-IYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEK 901
            +EYLP+GG  +  + + +LA G+N+E +K  R   VQ++SGTGA R+ A F +RF   S+ +++P P+W NH  I+RDA +  + + YY P T G DF+  ++DI   P  S  LLHACAHNPTGVDP  +QWKEI+  +K+K
Sbjct:   94 KEYLPIGGLAEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIASVVKKK 236          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AATM_SCHPO (Aspartate aminotransferase, mitochondrial OS=Schizosaccharomyces pombe GN=aat1 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.650e-33
Identity = 67/142 (47.18%), Postives = 95/142 (66.90%), Query Frame = 2
Query:  476 REYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEK 901
            +EY P+ G      +  KLAYGD  E IKD+ ++A QS+SGTGA  + A+F   F+P   IY+  PTW NH N++  A +T +++ YY P T+GLD   ++ D+ +AP+GS  LLHACAHNPTGVDP+K QW +I   +++K
Sbjct:  101 KEYAPITGIPSFRVQATKLAYGDVYESIKDRLVSA-QSISGTGALCIAANFLASFYPSKTIYVSDPTWGNHKNVFSRAGLTVKSYKYYDPATRGLDIKGMLSDLTSAPDGSIILLHACAHNPTGVDPTKAQWDDILKTMQKK 241          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AATM_PONAB (Aspartate aminotransferase, mitochondrial OS=Pongo abelii GN=GOT2 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.650e-33
Identity = 67/143 (46.85%), Postives = 95/143 (66.43%), Query Frame = 2
Query:  476 REYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQ-IYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEK 901
            +EYLP+GG  +  + + +LA G+NSE +K  R   VQ++SGTGA R+ A F +RF   S+ +++P P+W NH  I+RDA +  + + YY P T G DF   ++DI   P  S  LLHACAHNPTGVDP  +QWKEI+  +K++
Sbjct:   94 KEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKR 236          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AATM_MACFA (Aspartate aminotransferase, mitochondrial OS=Macaca fascicularis GN=GOT2 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.650e-33
Identity = 67/143 (46.85%), Postives = 95/143 (66.43%), Query Frame = 2
Query:  476 REYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQ-IYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEK 901
            +EYLP+GG  +  + + +LA G+NSE +K  R   VQ++SGTGA R+ A F +RF   S+ +++P P+W NH  I+RDA +  + + YY P T G DF   ++DI   P  S  LLHACAHNPTGVDP  +QWKEI+  +K++
Sbjct:   94 KEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKR 236          
The following BLAST results are available for this feature:
BLAST of DY258653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
AAT1_ARATH1.677e-7282.52Aspartate aminotransferase, mitochondrial OS=Arabi... [more]
AATM_DICDI4.153e-3951.41Aspartate aminotransferase, mitochondrial OS=Dicty... [more]
AAT5_ARATH8.748e-3547.26Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATC_ORYSJ1.143e-3445.89Aspartate aminotransferase, cytoplasmic OS=Oryza s... [more]
AATM_LUPAN5.670e-3446.58Aspartate aminotransferase P2, mitochondrial (Frag... [more]
AATM_HUMAN5.670e-3447.55Aspartate aminotransferase, mitochondrial OS=Homo ... [more]
AATM_MOUSE1.263e-3346.85Aspartate aminotransferase, mitochondrial OS=Mus m... [more]
AATM_SCHPO1.650e-3347.18Aspartate aminotransferase, mitochondrial OS=Schiz... [more]
AATM_PONAB1.650e-3346.85Aspartate aminotransferase, mitochondrial OS=Pongo... [more]
AATM_MACFA1.650e-3346.85Aspartate aminotransferase, mitochondrial OS=Macac... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DE02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258653 ID=DY258653; Name=DY258653; organism=Citrus clementina; type=EST; length=1218bp
CTACTTTGTTAAGTAATTTGTTCTTTACTCCATGTGAATGTCTCAGCTTC
TCCAAAATACAGTTGCCAAGTTCCAGGAATGTAAAATATATCCCTACCAT
ATGCCCCTAGAAGCTGTGATATGTCAAAGGGCAATGAGTACATTTTTGGA
AATTTAATTCTAGGAGATTAAGAACACCTTCAACGAGGGAAATACATTTG
TACACATTTCTCTTCTTTTTGGGCAAACTACACTAGGTGCAAATTACCAC
TGCCCTAATCTCTCCTAGCTTCCTTATAAGTGTGAGTTTGTGTGAGCATA
GAACATCTGTTACTTCTATTCATTACCCCTCCCTTCCTTTTTCTGCCTTT
TCCTGCCCTTCTTGAAGGACGGTTGAGCTGGTTGTATAAGTAATTGGATA
GGGTTGCTTTGAAATTTTTATCCTCCTCTTATTAATATTATAATTTCGGT
TTCCAAATTATGAATATTTTGGTTCAGGGAGTATCTTCCTATGGGAGGGA
GTGTGAAAATGGTGGAGGAAACTCTGAAGCTCGCCTATGGAGATAATTCT
GAGTTCATCAAGGATAAAAGGATAGCAGCTGTACAATCTCTCTCAGGGAC
TGGTGCATGCCGACTTTTTGCAGACTTTCAGAAGCGTTTTCATCCTGATT
CTCAAATCTACATACCTGTCCCAACATGGTCCAACCACCATAACATCTGG
AGAGATGCCCATGTCACTCANAGGACTTTTCATTACTATCACCCTGGGAC
TAAGGGTTTAGATTTTGCAGCACTGATGGATGACATTAAGAATGCACCCA
ATGGTTCATTCTTTCTACTTCATGCTTGTGCTCACAATCCCACTGGAGTG
GATCCTTCAAAGGACCAATGGAAAGAGATCTCATACCAAATAAAGGAAAA
AGGCACTTCCCCATCCTTGGAATGGCGTAACAGGTTTTTGCCCGTGGTGA
TCCGGAAAAAAATGCCCAGGCCATCCCAATTTTTTCCCAAGGAGGGCCCC
TAATTTGGATTAACCCAGTCCAAATGCAAAAAAAATAGGAATCCTATGGC
CCAAAAGAAAGAAAGCCTTTATGGTCATTGTAAAAAAAAAAAAAACAAAG
CAGGGGGTTGTTAAAAAATCCAATTTTGCACCCACCTTTGCCCGGGCCCC
CGGTAACACAAAATCCCCCCCTGGTTTCTGGGGGGCCCCTCCATAAACTC
CCCCCCCCCCCCTCTTGG
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