DY258672

Overview
NameDY258672
Unique NameDY258672
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1168
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258672 vs. ExPASy Swiss-Prot
Match: SERB_ARATH (Phosphoserine phosphatase, chloroplastic OS=Arabidopsis thaliana GN=PSP PE=1 SV=2)

HSP 1 Score: 322.783 bits (826), Expect = 2.447e-87
Identity = 177/297 (59.60%), Postives = 206/297 (69.36%), Query Frame = 2
Query:  137 MEGLVRSQISPIGAHYKQQHSVFIPKFSLKLRTNLCRARVGMMKHSKSFNSVAASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTFRNGGKAAAVPQIRKAHAYKGTCHDLGMELLILKARQPRGPELVYLLRGGNNSERPVAAKTKMGGFFTFKELKNSL 1027
            ME L  S++ P+    ++  S+F     L+LR   CR  V +M H K    V ASVQP E S LG   N +PSKE+L LWR+ +AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS+V+++L+KRPPRLSPGI+E            YLISGGFR MINP+AS+LGIP ENIFAN LLF +SGEFLGFD NEPT R+GGKA AV QIRK   YK T   +G     L+AR+P G +L ++   G      VAA       F F+ L NSL
Sbjct:    1 MEALTTSRVVPVQVPCRKLSSLFANFSCLELRRYPCRGLVSIMNHPKLLRPVTASVQPHELSTLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLRANNIDVYLISGGFRQMINPVASILGIPRENIFANNLLFGNSGEFLGFDENEPTSRSGGKAKAVQQIRKGRLYK-TMAMIGDGATDLEARKPGGADL-FICYAGVQLREAVAANADW-LIFKFESLINSL 294          
BLAST of DY258672 vs. ExPASy Swiss-Prot
Match: SERB_BOVIN (Phosphoserine phosphatase OS=Bos taurus GN=PSPH PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.481e-39
Identity = 82/167 (49.10%), Postives = 110/167 (65.87%), Query Frame = 2
Query:  359 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTFRNGGKAAAVPQIRKAHAYK 859
            E+  L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T +AMGG+VPF+ AL  RL+L +PS  QVQ  L + PP L+PGI E            +LISGGFR ++  +AS L IP  N+FAN+L F  +GE+ GFD  +PT  +GGK   +  +++   +K
Sbjct:    6 ELRNLFCSADAVCFDVDSTVIQEEGIDELAKFCGVEDAVSEMTRQAMGGAVPFKAALTQRLALIQPSREQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPSTNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFK 172          
BLAST of DY258672 vs. ExPASy Swiss-Prot
Match: SERB_RAT (Phosphoserine phosphatase OS=Rattus norvegicus GN=Psph PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 3.240e-39
Identity = 81/167 (48.50%), Postives = 112/167 (67.07%), Query Frame = 2
Query:  359 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTFRNGGKAAAVPQIRKAHAYK 859
            E+ +L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T RAMGG++PF++AL  RL+L +PS  QVQ  L + PP L+PGI E            +LISGGFR ++  +A+ L IP  N+FAN+L F  +GE+ GFD  +PT  +GGK   +  +++   +K
Sbjct:    6 ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTERLALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVAAKLNIPTTNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIGFLKEKFHFK 172          
BLAST of DY258672 vs. ExPASy Swiss-Prot
Match: SERB_PONAB (Phosphoserine phosphatase OS=Pongo abelii GN=PSPH PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 4.232e-39
Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = 2
Query:  359 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTFRNGGKAAAVPQIRKAHAYK 859
            E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  RL+L +PS  QVQ  + ++PP L+PGI E            +LISGGFR ++  +AS L IP  N+FAN+L F  +GE+ GFD  +PT  +GGK   +  +++   +K
Sbjct:    6 ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFK 172          
BLAST of DY258672 vs. ExPASy Swiss-Prot
Match: SERB_HUMAN (Phosphoserine phosphatase OS=Homo sapiens GN=PSPH PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 4.232e-39
Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = 2
Query:  359 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTFRNGGKAAAVPQIRKAHAYK 859
            E+ +L+ +ADAVCFDVDSTV  +EGIDELA+ CG   AV+E T RAMGG+VPF+ AL  RL+L +PS  QVQ  + ++PP L+PGI E            +LISGGFR ++  +AS L IP  N+FAN+L F  +GE+ GFD  +PT  +GGK   +  +++   +K
Sbjct:    6 ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFK 172          
BLAST of DY258672 vs. ExPASy Swiss-Prot
Match: SERB_MOUSE (Phosphoserine phosphatase OS=Mus musculus GN=Psph PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 5.527e-39
Identity = 81/167 (48.50%), Postives = 112/167 (67.07%), Query Frame = 2
Query:  359 EVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTFRNGGKAAAVPQIRKAHAYK 859
            E+ +L+ +ADAVCFDVDSTV  +EGIDELA+FCG   AV+E T RAMGG++PF++AL  RL+L +PS  QVQ  L + PP L+PGI E            +LISGGFR ++  +A+ L IP  N+FAN+L F  +GE+ GFD  +PT  +GGK   +  +++   +K
Sbjct:    6 ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTQRLALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVAAKLNIPTTNVFANRLKFYFNGEYAGFDEMQPTAESGGKGKVIRFLKEKFHFK 172          
BLAST of DY258672 vs. ExPASy Swiss-Prot
Match: SERB_DROME (Phosphoserine phosphatase OS=Drosophila melanogaster GN=aay PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 6.111e-38
Identity = 90/217 (41.47%), Postives = 128/217 (58.99%), Query Frame = 2
Query:  317 ASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDEXXXXXXXXXXXXYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTFRNGGKAAAVPQIRKAHAYKGTCHDLGMELLILKARQPRGPELVYLLRGGNNSERP 967
            ASA+   +    + +V+Q    +  VCFDVDSTV  +EGIDELAE+CG G  VA  T  AMGG++ F++AL  RL++ +P+  QV+DF+++RP  LS  +              YLISGGF  +I P+A+ LGIP +N++AN++LF   GE+  FD N+PT R+GGKA A+  IRK ++       +G     L+A  P      Y +  G N  RP
Sbjct:   42 ASAITPPKQPQLAAKVIQ---QSQIVCFDVDSTVICEEGIDELAEYCGKGSEVARVTKEAMGGAMTFQDALKIRLNIIRPTQQQVRDFIQERPSTLSKNVKRFVSHLKAEGKQVYLISGGFDCLIAPVANELGIPLKNVYANKMLFDYLGEYDSFDINQPTSRSGGKAEAIALIRKENSDDSLITMIGDGATDLEAVPPAN----YFIGFGGNVVRP 251          
The following BLAST results are available for this feature:
BLAST of DY258672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SERB_ARATH2.447e-8759.60Phosphoserine phosphatase, chloroplastic OS=Arabid... [more]
SERB_BOVIN2.481e-3949.10Phosphoserine phosphatase OS=Bos taurus GN=PSPH PE... [more]
SERB_RAT3.240e-3948.50Phosphoserine phosphatase OS=Rattus norvegicus GN=... [more]
SERB_PONAB4.232e-3948.50Phosphoserine phosphatase OS=Pongo abelii GN=PSPH ... [more]
SERB_HUMAN4.232e-3948.50Phosphoserine phosphatase OS=Homo sapiens GN=PSPH ... [more]
SERB_MOUSE5.527e-3948.50Phosphoserine phosphatase OS=Mus musculus GN=Psph ... [more]
SERB_DROME6.111e-3841.47Phosphoserine phosphatase OS=Drosophila melanogast... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI2DH08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258672 ID=DY258672; Name=DY258672; organism=Citrus clementina; type=EST; length=1168bp
TATTTTTTATGATTGGCAGTTGCGGGAAAAAGAAACAGAACTGAGTGGGC
AGACACTGAACATATCCCATCAGCACCCAACAACAGTGCGATCCAAAAGC
TTTAATTAACTTTCAAAAATTAACGTTATTAATTTGATGGAGGGGTTGGT
GAGATCTCAAATCTCTCCAATTGGTGCTCATTACAAACAACAACACTCTG
TTTTTATTCCGAAATTTTCATTGAAATTGAGGACAAATTTATGTAGAGCT
CGAGTTGGGATGATGAAGCATTCTAAATCATTCAATTCCGTTGCTGCTTC
AGTGCAACCATTAGAAGCCTCAGCATTGGGCCGTTCTGAGAACACACTGC
CCTCCAAAGAGGTTCTTCAGCTGTGGAGAACTGCTGATGCGGTGTGCTTC
GATGTTGATAGCACGGTATGTGTAGATGAGGGCATTGATGAACTTGCGGA
ATTTTGTGGAGCTGGAAAGGCTGTTGCGGAATGGACAGCCAGGGCAATGG
GGGGGTCTGTTCCGTTCGAGGAGGCCTTGGCTGCCAGACTTTCCTTGTTC
AAACCTTCATTGTCCCAAGTCCAGGATTTTCTTGAGAAGAGACCCCCTAG
GCTCTCACCTGGCATAGATGAGTTGGTCAAGAAGCTGAAGGCTAACAATA
AGAATGTTTATCTGATCTCTGGGGGCTTCCGTCATATGATCAATCCTATT
GCATCAGTCCTCGGGATTCCTCCTGAAAATATCTTTGCCAACCAACTGCT
GTTCAAGAGTTCTGGGGAGTTTCTGGGTTTTGATGCCAATGAACCTACTT
TCAGGAATGGAGGAAAAGCCGCTGCAGTGCCACAAATAAGGAAGGCTCAT
GCATATAAGGGTACTTGCCATGATTTGGGGATGGAGCTACTGATCCTTAA
GGCTCGTCAACCAAGAGGCCCCGAACTTGTTTATTTGCTACGGGGGGGGA
ACAACTCCGAGAGGCCCGTTGCAGCAAAAACCAAAATGGGCGGGTTCTTT
ACTTTCAAAGAATTGAAAAACTCCCTTTAAAAAAGCTTCTTTGGGTAAAT
TAACCCGGTATTCTTTCCCTCTCCCCCAAACGGGCTTCCTTTTTGGACGG
GGAAAGGGTGTAAAAAACCTCTAATTTGGGGAAAATTAAAAAGAAAACAG
GGGAAAAACTTTTCTCCC
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