DY258682

Overview
NameDY258682
Unique NameDY258682
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1046
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1200 contig Ccv1_Contig1200:1..1046. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DY258682 vs. ExPASy Swiss-Prot
Match: DNAJ_METAC (Chaperone protein dnaJ OS=Methanosarcina acetivorans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.435e-12
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 2 
Query:  260 DWYRLLGVDEEATIETIRKRYHKLALQLHPDKNKHRKAEIAFKLISEAYTCLSDTAKRRAFN 445
            D+Y +LG+ ++A++E I+K Y KLALQ HPD+NK   AE  FK ISEAY  LSDT KR  ++
Sbjct:    6 DYYEILGLPKDASVEDIKKTYRKLALQYHPDRNKDPGAEDKFKEISEAYAVLSDTEKRAQYD 67
[Close]
BLAST of DY258682 vs. ExPASy Swiss-Prot
Match: DNJ49_ARATH (Chaperone protein dnaJ 49 OS=Arabidopsis thaliana GN=ATJ49 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.098e-11
Identity = 31/62 (50.00%), Postives = 47/62 (75.81%), Query Frame = 2 
Query:  260 DWYRLLGVDEEATIETIRKRYHKLALQLHPDKNKHRKAEIAFKLISEAYTCLSDTAKRRAFN 445
            D+Y +LG+++  +++ IRK Y KL+L++HPDKNK   +E AFK +S+A+TCLSD   RR F+
Sbjct:   99 DYYAILGLEKNCSVDEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFTCLSDGNSRRQFD 160
[Close]
BLAST of DY258682 vs. ExPASy Swiss-Prot
Match: DNAJ_METMA (Chaperone protein dnaJ OS=Methanosarcina mazei GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.194e-11
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 2 
Query:  260 DWYRLLGVDEEATIETIRKRYHKLALQLHPDKNKHRKAEIAFKLISEAYTCLSDTAKRRAFN 445
            D+Y +LG+ +++++E I+K Y KLALQ HPD+NK   AE  FK ISEAY  LSD  KR  ++
Sbjct:    6 DYYEILGLSKDSSVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVLSDAEKRAQYD 67
The following BLAST results are available for this feature:
BLAST of DY258682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
DNAJ_METAC6.435e-1254.84Chaperone protein dnaJ OS=Methanosarcina acetivora... [more]
DNJ49_ARATH1.098e-1150.00Chaperone protein dnaJ 49 OS=Arabidopsis thaliana ... [more]
DNAJ_METMA3.194e-1151.61Chaperone protein dnaJ OS=Methanosarcina mazei GN=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3AA10FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258682 ID=DY258682; Name=DY258682; organism=Citrus clementina; type=EST; length=1046bp
AAAAAAACTCTCCCGAAAACTTTGCTCTTTTTTCTTAACCGCTCCACTCT
CATTTCCCAAAAAAAAAAGAAAAAAAAAATCACATTCTTTGATTCTTGTT
CAAGTTTTCTTTAAGTTTTGTCAAATGGGGATATTTGATAAAGAAGATTC
AGATATGAAATCCAAGTTAGTTCTAGATATTTGCTCCATTTCAACAACCG
CCATTGGCTGTGCTCACAGGCGCATTAGTCCTCCAAGCCCCGCTGAGTCA
CATTTCATCGACTGGTACCGCCTTCTCGGCGTTGACGAAGAAGCAACAAT
AGAAACTATCCGAAAGCGGTACCATAAACTTGCTCTGCAACTTCATCCGG
ACAAGAACAAGCACCGCAAAGCTGAGATTGCATTCAAGCTTATTTCAGAG
GCATATACATGTCTCTCAGACACTGCCAAGAGAAGAGCGTTCAATTTGGA
GAGATGGAAAAAGTTTTGCATTGAATGCAACAGAATCCCCTACACAAGCT
GCAAGTCACCTGTGAATTCACGTGCATCAAAATACAAGGCTTGGAATCCA
GCTGCCTGGTCAAGATCTTATAAAATTCTGAGAAACCTGAGGGACATAAA
GGAAAGATTCAAAGAAGAGGCAAAAGTGATAGAGAACTGTTTGAGTGCTG
CTGCATCACGGAAGGAATCTCTACTTGTTAATCCATCAAGCAATTTGTTC
CAAAGTCGCCACAGGACCCAGAAAGAGACTCCTGTCTTTGACCCATCTGA
CTATCTCTTTCAAGGATACCCGCATCTCCGAAATAGAATGTTTATCAAAC
CACAGAGTTTCTGGTACTTTCCAAGGGAAAATATGGAAAAATGTGATGAG
GCAAGTGGGGATGTGTTATGATTCACCCAATCTTTGAGAGCAAACCACAG
AAGGGGATGGTTTAAAAACAAATCCACTTTGTAACCGGTTCAAAATTCGG
CATTTCAAATTTAACGTTTCCTTTAAAAAAAAACAAAGGCAAATTGCAAA
AATCCCTTTCTTTTATCAAGAACAACATCCCCCATTGTGCTTTTTT
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