DY258698

Overview
NameDY258698
Unique NameDY258698
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1034
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1208 contig Ccv1_Contig1208:1..1034. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258698 vs. ExPASy Swiss-Prot
Match: DPM1_HUMAN (Dolichol-phosphate mannosyltransferase OS=Homo sapiens GN=DPM1 PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 2.515e-71
Identity = 129/214 (60.28%), Postives = 168/214 (78.50%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSARIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRIRLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADLSHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWPGVSDLTGSFRLNKKSVLEDVISSCVSKGYVLQMEMSVRA*RKGYHIGEVPITFGERVIGKSK 693
            Y +++PTYNER +   IV+L+ K   E  ++ EI +++DGSPDGT++V +QL+++YG DRI LRPR KKLGLGTAY+HG+KHA+G++++IMDADLSHHPK++P F +KQ E    IV+GTRY  +GGV+GW+L R++ SRGAN L Q LL PG SDLTGSFRL +K VLE +I  CVSKGYV QMEM VRA +  Y IGEVPI+F +RV G+SK
Sbjct:   27 YSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESK 240          

HSP 2 Score: 21.557 bits (44), Expect = 2.515e-71
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  683 GSQRLGGSENGQKLKGLL 736
            G  +LGG+E    LKGLL
Sbjct:  237 GESKLGGNEIVSFLKGLL 254          
BLAST of DY258698 vs. ExPASy Swiss-Prot
Match: DPM1_CRIGR (Dolichol-phosphate mannosyltransferase OS=Cricetulus griseus GN=DPM1 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 4.277e-71
Identity = 129/214 (60.28%), Postives = 168/214 (78.50%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSARIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRIRLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADLSHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWPGVSDLTGSFRLNKKSVLEDVISSCVSKGYVLQMEMSVRA*RKGYHIGEVPITFGERVIGKSK 693
            Y +++PTYNER +   IV+L+ K   E  ++ EI +++DGSPDGT+EV +QL+++YG DRI LRPR KKLGLGTAY+HG+KHA+G++V+IMDADLSHHPK++P F +KQ E    IV+GTRY  +GGV+GW+L R++ SRGAN + Q LL PG SDLTGSFRL +K VL+ +I  CVSKGYV QMEM VRA +  Y IGEVPI+F +RV G+SK
Sbjct:   33 YSVLLPTYNERENLPLIVWLLVKSFSESSINYEIIIIDDGSPDGTREVAEQLEKIYGPDRILLRPREKKLGLGTAYIHGIKHATGNYVIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFITQILLRPGASDLTGSFRLYRKEVLQKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESK 246          

HSP 2 Score: 21.557 bits (44), Expect = 4.277e-71
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  683 GSQRLGGSENGQKLKGLL 736
            G  +LGG+E    LKGLL
Sbjct:  243 GESKLGGNEIVSFLKGLL 260          
BLAST of DY258698 vs. ExPASy Swiss-Prot
Match: DPM1_MOUSE (Dolichol-phosphate mannosyltransferase OS=Mus musculus GN=Dpm1 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 5.579e-71
Identity = 129/214 (60.28%), Postives = 167/214 (78.04%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSARIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRIRLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADLSHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWPGVSDLTGSFRLNKKSVLEDVISSCVSKGYVLQMEMSVRA*RKGYHIGEVPITFGERVIGKSK 693
            Y +++PTYNER +   IV+L+ K   E  ++ EI +++DGSPDGT+EV +QL ++YG DRI LRPR KKLGLGTAY+HG+KHA+G++V+IMDADLSHHPK++P F +KQ E    IV+GTRY  +GGV+GW+L R++ SRGAN + Q LL PG SDLTGSFRL +K VL+ +I  CVSKGYV QMEM VRA +  Y IGEVPI+F +RV G+SK
Sbjct:   27 YSVLLPTYNERENLPLIVWLLVKSFSESAINYEIIIIDDGSPDGTREVAEQLAEIYGPDRILLRPREKKLGLGTAYIHGIKHATGNYVIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFITQILLRPGASDLTGSFRLYRKEVLQKLIEKCVSKGYVFQMEMIVRARQMNYTIGEVPISFVDRVYGESK 240          

HSP 2 Score: 21.557 bits (44), Expect = 5.579e-71
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  683 GSQRLGGSENGQKLKGLL 736
            G  +LGG+E    LKGLL
Sbjct:  237 GESKLGGNEIVSFLKGLL 254          
BLAST of DY258698 vs. ExPASy Swiss-Prot
Match: DPM1_PIG (Dolichol-phosphate mannosyltransferase OS=Sus scrofa GN=DPM1 PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 7.939e-70
Identity = 125/214 (58.41%), Postives = 167/214 (78.04%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSARIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRIRLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADLSHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWPGVSDLTGSFRLNKKSVLEDVISSCVSKGYVLQMEMSVRA*RKGYHIGEVPITFGERVIGKSK 693
            Y +++PTYNER +   IV+L+ K   E  ++ EI +++DGSPDGT+++ +QL ++YG D+I LRPR KKLGLGTAY+HG+KHA+G++++IMDADLSHHPK++P F +KQ E    IV+GTRY  +GGV+GW+L R++ SRGAN + Q LL PG SDLTGSFRL +K VL+ +I  CVSKGYV QMEM VRA +  Y IGEVPI+F +RV G+SK
Sbjct:   26 YSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDIAEQLVKIYGSDKILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFITQILLRPGASDLTGSFRLYRKEVLQKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESK 239          

HSP 2 Score: 21.557 bits (44), Expect = 7.939e-70
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  683 GSQRLGGSENGQKLKGLL 736
            G  +LGG+E    LKGLL
Sbjct:  236 GESKLGGNEIVSFLKGLL 253          
BLAST of DY258698 vs. ExPASy Swiss-Prot
Match: DPM1_DROME (Probable dolichol-phosphate mannosyltransferase OS=Drosophila melanogaster GN=CG10166 PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.934e-69
Identity = 130/214 (60.75%), Postives = 164/214 (76.64%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSARIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRIRLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADLSHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWPGVSDLTGSFRLNKKSVLEDVISSCVSKGYVLQMEMSVRA*RKGYHIGEVPITFGERVIGKSK 693
            Y I++PTYNE+ +   I++LI K+++   ++ E+ V++DGSPDGT +V K LQ++YGED+I LRPR  KLGLGTAY+HG+KHA+G F+VI+DADLSHHPK++P F K Q E    IV+GTRY  +GGV GW+  R+L SRGAN L+Q LL P  SDLTGSFRL KK VLE  I+SCVSKGYV QMEM VRA + GY I EVPITF +R+ G SK
Sbjct:    8 YSILMPTYNEKDNLPIIIWLIVKYMKASGLEYEVIVIDDGSPDGTLDVAKDLQKIYGEDKIVLRPRGSKLGLGTAYIHGIKHATGDFIVIIDADLSHHPKFIPEFIKLQQEGNYDIVSGTRYAGNGGVFGWDFKRKLISRGANFLSQVLLRPNASDLTGSFRLYKKDVLEKCIASCVSKGYVFQMEMLVRARQHGYTIAEVPITFVDRIYGTSK 221          
BLAST of DY258698 vs. ExPASy Swiss-Prot
Match: DPM1_BOVIN (Dolichol-phosphate mannosyltransferase OS=Bos taurus GN=DPM1 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 5.093e-69
Identity = 125/214 (58.41%), Postives = 166/214 (77.57%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSARIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRIRLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADLSHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWPGVSDLTGSFRLNKKSVLEDVISSCVSKGYVLQMEMSVRA*RKGYHIGEVPITFGERVIGKSK 693
            Y +++PTYNER +   IV+L+ K   E   + EI +++DGSPDGT++V +QL+++YG DRI LRPR KKLGLGTAY+HG+KHA+G++++IMDADLSHHPK++P F +KQ E    IV+GTRY  +GGV+GW+L R++ SR AN + Q LL PG SDLTGSFRL +K VL+ +I  C+SKGYV QMEM VRA +  Y IGEVPI+F +RV G+SK
Sbjct:   27 YSVLLPTYNERENLPFIVWLLVKSFSESGFNYEIIIIDDGSPDGTRDVAEQLEKIYGSDRILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNGGVYGWDLKRKIISRVANFITQILLRPGASDLTGSFRLYRKEVLQKLIGKCISKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESK 240          

HSP 2 Score: 21.557 bits (44), Expect = 5.093e-69
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  683 GSQRLGGSENGQKLKGLL 736
            G  +LGG+E    LKGLL
Sbjct:  237 GESKLGGNEIVSFLKGLL 254          
BLAST of DY258698 vs. ExPASy Swiss-Prot
Match: DPM1_SCHPO (Dolichol-phosphate mannosyltransferase OS=Schizosaccharomyces pombe GN=dpm1 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.061e-67
Identity = 129/214 (60.28%), Postives = 158/214 (73.83%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSARIVYLIFKHL--REVDLEISVVEDGSPDGTQEVVKQLQQLYGEDRIRLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADLSHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWPGVSDLTGSFRLNKKSVLEDVISSCVSKGYVLQMEMSVRA*RKGYHIGEVPITFGERVIGKSK 693
            Y +++PTYNER +   I YLI K     ++D EI +++D SPDGTQEV K+LQ++YGED+I L+PR  KLGLGTAY+HGLK A+G FV+IMDAD SHHPKYLP F K Q E    IV GTRY + GGV+GWNL R+  SRGAN+LA T+L  GVSD+TGSFRL KK VLE ++S   SKGYV QME+  RA    Y IGEVPI F +R+ G+SK
Sbjct:    4 YSVLLPTYNERKNLPIITYLIAKTFDQEKLDWEIVIIDDASPDGTQEVAKELQKIYGEDKILLKPRSGKLGLGTAYIHGLKFATGDFVIIMDADFSHHPKYLPEFIKLQKEHNYDIVLGTRYAKDGGVYGWNLKRKFISRGANLLASTVLGTGVSDVTGSFRLYKKPVLETLMSEVTSKGYVFQMEIIARAREHNYTIGEVPIAFVDRLYGESK 217          
BLAST of DY258698 vs. ExPASy Swiss-Prot
Match: DPM1_DICDI (Dolichol-phosphate mannosyltransferase OS=Dictyostelium discoideum GN=dpm1 PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 5.450e-64
Identity = 121/213 (56.81%), Postives = 160/213 (75.12%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSARIVYLIFKHLRE--VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRIRLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADLSHHPKYLPSFRKKQLETGASIVTGTRYVRSGGVHGWNLMRELTSRGANVLAQTLLWPGVSDLTGSFRLNKKSVLEDVISSCVSKGYVLQMEMSVRA*RKGYHIGEVPITFGERVIGKS 690
            Y II+PTY ER +   I++LI   L +  +D E+ +VED SPDGT EV +QLQ++YGE++I++  RP K+GLG+AY+ G+K ++G++V++MDADLSHHPK++P F +KQ +    IVTGTRY   GGV GWNL R+LTSR AN +A  LL PGVSDLTGSFRL +K VLE +I+   SKGYV Q+EM VRA + GY +GEVPITF +R+ G S
Sbjct:   20 YTIILPTYKERENLPIIIWLISTELEKCFIDYEVVIVEDNSPDGTLEVAQQLQKIYGEEKIKILSRPGKMGLGSAYMDGIKKSTGNWVILMDADLSHHPKFIPQFIEKQKKLNCEIVTGTRYQSGGGVFGWNLYRKLTSRVANYIASVLLTPGVSDLTGSFRLYRKDVLEKLITQNKSKGYVFQVEMMVRANQLGYQVGEVPITFVDRIFGVS 232          
BLAST of DY258698 vs. ExPASy Swiss-Prot
Match: DPM1_USTMA (Dolichol-phosphate mannosyltransferase OS=Ustilago maydis GN=DPM1 PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.100e-15
Identity = 69/218 (31.65%), Postives = 105/218 (48.17%), Query Frame = 1
Query:   64 IIIPTYNERLSSARIVYLIFKHLRE------VDLEISVVEDGSPDGTQEVVKQLQQLYGEDRIRLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADLSHHPKYLPSFRKKQLETGASIVTGTRY-VRSGGVHGWNLMRELTSRGANVLAQTLLWPGVSD-LTGSFRLNKKSVLEDVISSCVSKGYVLQMEMSVRA*RKGYHIGEVPITFGERVIGKSK 693
            +I+P + E L+   +V  +             + EI +V+D S DG+ E V  LQ       +R+  R  + GL +A V G + A G  ++ MDADL H P+ +PS     L    S V GTRY V       W L R + S GA +LA+ L     SD ++G F + K S          ++G+ + +++ V++      I EVP +FG R  G+SK
Sbjct:   32 VIVPAFRENLNLRPLVTRLSSAFASQSSSELANTEIIIVDDNSRDGSVETVSALQS--EGYNVRIIVRTSERGLSSAVVRGFREARGQRMICMDADLQHPPEAVPSL-LLALNGQKSFVLGTRYGVGVSMDKDWPLHRRIISSGARMLARPL--TSASDPMSGFFGITKHS-FHTADHHINAQGFKIALDLLVKSGVHSTDIAEVPFSFGLRQEGESK 243          
BLAST of DY258698 vs. ExPASy Swiss-Prot
Match: DPM1_YEAST (Dolichol-phosphate mannosyltransferase OS=Saccharomyces cerevisiae GN=DPM1 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 7.980e-15
Identity = 66/220 (30.00%), Postives = 106/220 (48.18%), Query Frame = 1
Query:   58 YRIIIPTYNERLSSARIVYLIFKHLREV---DLEISVVEDGSPDGTQEVVKQL-QQLYGEDRIRLRPRPKKLGLGTAYVHGLKHASGSFVVIMDADLSHHPKYLPSFRKKQLETGASIVTGTRYVRSGGV-HGWNLMRELTSRGANVLAQTLLWPGVSDLTGSFRLNKKSVLEDVISSCVSKGYVLQMEMSVR---A*RKGYHIGEVPITFGERVIGKSK 693
            Y +I+P Y+E+L+   +   +F  +        E+  V+D S DG+ E V  L  Q Y    +R+  R  + GL +A + G   A G ++V MDADL H P+ +P   +   +   ++  GTRY    G+   W + R + S  A ++A+ L       ++G F L KK +         S+G+ + +E+  +          IGEVP TFG R  G+SK
Sbjct:    5 YSVIVPAYHEKLNIKPLTTRLFAGMSPEMAKKTELIFVDDNSQDGSVEEVDALAHQGYN---VRIIVRTNERGLSSAVLKGFYEAKGQYLVCMDADLQHPPETVPKLFESLHDHAFTL--GTRYAPGVGIDKDWPMYRRVISSTARMMARPLTIAS-DPMSGFFGLQKKYLENCNPRDINSQGFKIALELLAKLPLPRDPRVAIGEVPFTFGVRTEGESK 218          
The following BLAST results are available for this feature:
BLAST of DY258698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
DPM1_HUMAN2.515e-7160.28Dolichol-phosphate mannosyltransferase OS=Homo sap... [more]
DPM1_CRIGR4.277e-7160.28Dolichol-phosphate mannosyltransferase OS=Cricetul... [more]
DPM1_MOUSE5.579e-7160.28Dolichol-phosphate mannosyltransferase OS=Mus musc... [more]
DPM1_PIG7.939e-7058.41Dolichol-phosphate mannosyltransferase OS=Sus scro... [more]
DPM1_DROME1.934e-6960.75Probable dolichol-phosphate mannosyltransferase OS... [more]
DPM1_BOVIN5.093e-6958.41Dolichol-phosphate mannosyltransferase OS=Bos taur... [more]
DPM1_SCHPO1.061e-6760.28Dolichol-phosphate mannosyltransferase OS=Schizosa... [more]
DPM1_DICDI5.450e-6456.81Dolichol-phosphate mannosyltransferase OS=Dictyost... [more]
DPM1_USTMA2.100e-1531.65Dolichol-phosphate mannosyltransferase OS=Ustilago... [more]
DPM1_YEAST7.980e-1530.00Dolichol-phosphate mannosyltransferase OS=Saccharo... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAI3AD06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258698 ID=DY258698; Name=DY258698; organism=Citrus clementina; type=EST; length=1034bp
TTGAGACGAATTATTAATAATATGGAAGAGACGAACAAGAACAAGAACAA
GAACAAATACAGAATAATTATACCAACATACAACGAACGCCTCAGCAGTG
CTCGGATCGTTTACCTCATCTTCAAGCATCTGCGGGAGGTAGATTTAGAA
ATAAGCGTGGTGGAGGATGGAAGTCCTGATGGTACACAAGAAGTTGTAAA
ACAATTGCAGCAATTATACGGAGAAGATCGAATTCGGTTGAGACCTAGAC
CGAAGAAGCTTGGATTAGGGACTGCTTACGTTCATGGTTTGAAACATGCA
TCGGGCAGTTTTGTTGTGATTATGGATGCTGATTTATCCCACCATCCAAA
GTACTTGCCAAGCTTCAGAAAGAAACAGTTGGAGACAGGTGCAAGTATTG
TAACTGGAACCCGGTACGTTAGAAGTGGGGGTGTGCATGGGTGGAATCTT
ATGCGCGAACTGACTAGTAGAGGAGCCAATGTCCTTGCTCAAACACTTTT
ATGGCCTGGGGTATCAGATCTCACTGGTTCTTTCCGGCTTAATAAGAAAT
CAGTGCTTGAAGATGTCATTAGTTCCTGTGTGAGTAAGGGATATGTCCTT
CAAATGGAGATGAGTGTTCGCGCTTGAAGAAAGGGGTACCACATTGGAGA
GGTTCCAATTACATTTGGAGAAAGAGTAATTGGGAAGTCAAAGGCTTGGA
GGATCCGAGAATGGCCAAAAACTAAAAGGGCTTCTAAATCCTTCGCGTCC
AACCATAGAAGGTAAAACCTGCCCCCCTCCAGGAGTAGCCGGTCGAACAC
AAGCCCCGGGATGGGTTCCCTTAAGATCATTCCCTCCCCCCCGGGAGGAA
AAAAAATCTACCCACCCTATTCCCGGGCCCCCGAATAAACAACTAATGGA
GGGGCGGAAGGAAAGCCAATAGGGTTTTTTCCCAAAGGGAAAAGGGAAGC
CCCTCTTTCGGAGGCGAAACTGGCCCCCCCCGGGCCCCTTGAAACAAGGG
AAAATCCAACGCGGGGGGGGCTGGGCGATCCTTC
back to top