DY258700

Overview
NameDY258700
Unique NameDY258700
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1223
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1209 contig Ccv1_Contig1209:1..1223. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258700 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 5.153e-43
Identity = 106/257 (41.25%), Postives = 144/257 (56.03%), Query Frame = 1
Query:  220 DATSNVHIVYMGEKKYEDPVAITKSHHRFLSTVLGSKEAAKHSILYSYKHGFSGFAARLTKTQAEKIAELPGVVQVIPNGILKLHTTRSWEFMGLHYYQSSKNLSTESNMXXXXXXXXXXXXVWPESESFSDKGMGQAPVPPHWKGICQKGEKFNSSNCNRKLIGARWFIKGIMDMINASTNTDEYFSPRDAVGHGTHTASTAAGYFVEKQTIEG*LLDYPRKST-FSPLGIYKAGWDIGCTDADVLKAFEKTITDG 987
            D   N++IVYMG +K EDP +    H   L  V+GS  A + S+L++YK  F+GFA +LT+ +AEKIA + GVV V  N + +LHTTRSW+F+G       ++   ESN+            +WPES SF D+G   +P PP WKG C   E  N+  CNRK+IGAR +       I    +  +   PRD  GHGTHTASTAAG  V +  + G  L   R     + +  YK  W+ GC+D D+L A++  I DG
Sbjct:   28 DDGKNIYIVYMG-RKLEDPDSAHLHHRAMLEQVVGSTFAPE-SVLHTYKRSFNGFAVKLTEEEAEKIASMEGVVSVFLNEMNELHTTRSWDFLGFPLTVPRRS-QVESNI----VVGVLDTGIWPESPSFDDEGF--SPPPPKWKGTC---ETSNNFRCNRKIIGARSY------HIGRPISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADG 266          
BLAST of DY258700 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 4.225e-37
Identity = 92/250 (36.80%), Postives = 141/250 (56.40%), Query Frame = 1
Query:  238 HIVYMGEKKYEDPVAITKSHHRFLSTVLGSKEAAKHSILYSYKHGFSGFAARLTKTQAEKIAELPGVVQVIPNGILKLHTTRSWEFMGLHYYQSSKNLSTESNMXXXXXXXXXXXXVWPESESFSDKGMGQAPVPPHWKGICQKGEKFNSSNCNRKLIGARWFIKGIMDMINASTNTDEYFSPRDAVGHGTHTASTAAGYFVEKQTIEG*LLDYPR-KSTFSPLGIYKAGWDIGCTDADVLKAFEKTITD 984
            +IV+M   K + P +     + + S++    ++A+  +LY+Y++   GF+ RLT+ +A+ +   PGV+ V+P    +LHTTR+  F+GL   + + +L  E+              VWPES+S+SD+G G  P+P  WKG C+ G  F +S CNRKLIGAR+F +G    +     + E  SPRD  GHGTHT+STAAG  VE  ++ G      R  +  + + +YK  W  GC  +D+L A +K I D
Sbjct:   32 YIVHMA--KSQMPSSFDLHSNWYDSSLRSISDSAE--LLYTYENAIHGFSTRLTQEEADSLMTQPGVISVLPEHRYELHTTRTPLFLGLD--EHTADLFPEAGSYSDVVVGVLDTGVWPESKSYSDEGFG--PIPSSWKGGCEAGTNFTASLCNRKLIGARFFARGYESTMGPIDESKESRSPRDDDGHGTHTSSTAAGSVVEGASLLGYASGTARGMAPRARVAVYKVCWLGGCFSSDILAAIDKAIAD 273          
BLAST of DY258700 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.406e-32
Identity = 94/252 (37.30%), Postives = 134/252 (53.17%), Query Frame = 1
Query:  238 HIVYMGEKKYEDPVAITKSHHRFLSTVLGSKEAAKHSILYSYKHGFSGFAARLTKTQAEKIAELPGVVQVIPNGILKLHTTRSWEFMGLHYYQSSKNLSTESNMXXXXXXXXXXXXVWPESESFSDKGMGQAPVPPHWKGICQKGEKFNSSNCNRKLIGARWFIKGIMDMINASTNTDEYFSPRDAVGHGTHTASTAAGYFVEKQTIEG*LLDYPRKSTFSP-LGIYKAGW-DIGCTDADVLKAFEKTITDG 987
            +I+Y+G++       I K+H   LS++  S+E AK   +YSY   F+ FAA+L+  +A+K+ E+  VV V  N   KLHTT+SW+F+GL    + ++L  E ++            + P+SESF D G+G  P P  WKG C  G   N + CN K+IGA++F        + +    E  SP D  GHGTHT+ST AG  V   ++ G      R +  S  L +YK  W   GC D D+L  FE  I DG
Sbjct:   38 YIIYLGDRPDNTEETI-KTHINLLSSLNISQEEAKERKVYSYTKAFNAFAAKLSPHEAKKMMEMEEVVSVSRNQYRKLHTTKSWDFVGLP-LTAKRHLKAERDV----IIGVLDTGITPDSESFLDHGLG--PPPAKWKGSC--GPYKNFTGCNNKIIGAKYF------KHDGNVPAGEVRSPIDIDGHGTHTSSTVAGVLVANASLYGIANGTARGAVPSARLAMYKVCWARSGCADMDILAGFEAAIHDG 273          
The following BLAST results are available for this feature:
BLAST of DY258700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CUCM1_CUCME5.153e-4341.25Cucumisin OS=Cucumis melo PE=1 SV=1[more]
SUBL_ARATH4.225e-3736.80Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
XSP1_ARATH1.406e-3237.30Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3AD08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258700 ID=DY258700; Name=DY258700; organism=Citrus clementina; type=EST; length=1223bp
GTGAAGATCTAATAGAAGAGCTAACTTATGAACATTCCCATTTTTCATTG
AACAATTGAAACTCTGTCTAGCACAAAATCCTCCGCACGTTTCCATGTGC
TTTGCTGATTGATATATATTGTATCAAGAAACAGAATGGAGGCAAGAAAA
ACTCAGTTGCTGAGAATTCTTGTCGTCATTCTGCTCCAACACCATCTTCA
GATTTCCTTAATATTGGTTGATGCAACAAGTAATGTGCACATTGTGTATA
TGGGAGAGAAGAAGTATGAAGATCCAGTAGCCATCACAAAGTCTCACCAC
AGATTTCTATCAACCGTGCTTGGAAGCAAAGAAGCAGCAAAGCATTCAAT
TCTATACAGCTATAAACATGGGTTTTCAGGGTTTGCTGCAAGGCTAACAA
AAACTCAGGCAGAAAAGATAGCAGAACTTCCTGGGGTTGTTCAAGTAATT
CCCAATGGAATTCTTAAGCTTCATACAACCAGAAGCTGGGAATTCATGGG
GCTCCACTATTATCAGTCTTCAAAAAATCTATCAACAGAGAGCAACATGG
GTGAAGGTACCATCATTGGTATCATTGATACAGGAGTTTGGCCAGAGTCT
GAAAGTTTCAGTGATAAAGGCATGGGTCAAGCTCCAGTTCCACCACATTG
GAAAGGAATATGCCAAAAGGGAGAGAAGTTCAACTCTTCCAATTGCAACA
GAAAGTTAATTGGTGCTCGGTGGTTCATAAAAGGGATCATGGATATGATC
AATGCATCCACTAACACTGATGAGTATTTTTCTCCAAGGGATGCAGTTGG
ACACGGCACTCATACAGCATCTACAGCAGCTGGGTATTTTGTTGAAAAGC
AAACTATAGAGGGCTAGCTGCTGGATTACCCGAGGAAGAGCACCTTTAGC
CCACTTGGCATTTACAAGGCTGGCTGGGATATTGGATGCACTGATGCTGA
TGTACTAAAAGCATTTGAAAAAACCATAACCGATGGGAATGGAAGTCCTA
ACGGGGTCCTTTGGGCAAAGAAAATCCCCCTGTTTTCCCAAAATTGATCA
AACCTAATTCAAATTGCCAAAAGGTTCCCCTTCCCTGCCATTTTGCCCAA
GGGGGAAACACCGTTAAATTTTCTCTTCCCCCCAGGGAAAAAGCAAAAAG
GGCCCCCGGTTTTTGTCCAAAAAAAAAAATTTTTGTGAAAAAAAACCCAC
ACCACCCCCCCCTTTTTGTGGAA
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