DY258705

Overview
NameDY258705
Unique NameDY258705
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1192
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1210 contig Ccv1_Contig1210:1..1192. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258705 vs. ExPASy Swiss-Prot
Match: YQJG_ECOLI (Uncharacterized protein yqjG OS=Escherichia coli (strain K12) GN=yqjG PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 3.548e-57
Identity = 119/264 (45.08%), Postives = 157/264 (59.47%), Query Frame = 1
Query:   58 GWVFPATNTEEPGAEPDPLNGAKTIRDLYELASTNYSGKFTVPVCSLN**SPFEYCSLCLHVLTYLSGFVLY*VLWDKKLKTIVNNESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEILGKQRYICGNRLTEADIRLFVTLITFDEVYAVHFKCNKILLREYPNLFNYTKDIYQIPSMSSTVNMQHIKRHYYGSHPSIYRYGIIPLAPDIDYSSPHDRE 849
            GW F   +   PGA  D L   + +  LY  A  +YSG+ TVPV                              LWDKK  TIV+NESAEIIRMFNT F+ +   A  D +P   + +ID  N WIY+ +NNGVY+ GFAT Q  YDEAV +V+E+L + E+ILG+ RY+ GN+LTEADIRL+ TL+ FD VY  HFKC+K  + +Y NL+ + +DIYQ+P ++ TVN  HI+ HY+ SH +I   GII + P  D   PH R+
Sbjct:   95 GWTF---DDSFPGATGDTLYQNEFLYQLYLHADPHYSGRVTVPV------------------------------LWDKKNHTIVSNESAEIIRMFNTAFDALGAKAG-DYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRD 324          
BLAST of DY258705 vs. ExPASy Swiss-Prot
Match: GTO2_SCHPO (Glutathione S-transferase omega-like 2 OS=Schizosaccharomyces pombe GN=gto2 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 3.444e-44
Identity = 103/260 (39.62%), Postives = 144/260 (55.38%), Query Frame = 1
Query:   58 GWVFPATNTEEPGAEPDPLNGAKTIRDLYELASTNYSGKFTVPVCSLN**SPFEYCSLCLHVLTYLSGFVLY*VLWDKKLKTIVNNESAEIIRMFNTEFNDIAENAS---LDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEIL--GKQRYICGNRLTEADIRLFVTLITFDEVYAVHFKCNKILLR-EYPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYGSHPSIYRYGIIPLAP 816
            GW F   N     +  DPL  +  +R+LY  A  NY+ +FTVPV                              LWD K  TIVNNESAEIIRMFN  FN++ E+     +DL+PS  R +ID  N++ Y+ +NNGVY+ GFAT    Y++ V+ V++ LD+ E++L   K  ++ G+ LTE D+RL+ T++ FD VY  HFKCN   +R  YP++  + K +Y + P+   T + +HIK HY  SH  I   GI PL P
Sbjct:   81 GWNFDKEND----STGDPLYNSPYLRNLYFRADPNYNMRFTVPV------------------------------LWDSKYNTIVNNESAEIIRMFNDAFNEVIEDEEKRVVDLYPSSLRTKIDELNDYFYDTVNNGVYKTGFATTAEAYEKNVRVVFQGLDRLEQVLKESKGPFLLGDHLTETDVRLYTTIVRFDPVYVQHFKCNIGTIRHNYPHINQWLKRLYWKHPAFHETTDFKHIKCHYTQSHTQINPLGITPLGP 306          
BLAST of DY258705 vs. ExPASy Swiss-Prot
Match: GTO2_YEAST (Glutathione S-transferase omega-like 2 OS=Saccharomyces cerevisiae GN=ECM4 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 4.078e-37
Identity = 103/268 (38.43%), Postives = 134/268 (50.00%), Query Frame = 1
Query:   97 AEPDPLNGAKTIRDLYELASTNYSGKFTVPVCSLN**SPFEYCSLCLHVLTYLSGFVLY*VLWDKKLKTIVNNESAEIIRMFNT----EFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEILG------KQRY-------------ICGNRLTEADIRLFVTLITFDEVYAVHFKCNKILLRE-YPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYGSHPSIYRYGIIPLAPDID 825
            A  +P  G K I DLY  +   YS +FTVPV                              LWD + +TIVNNES+EIIR+ N+    EF D  ++   DL P+  + QID  N W+Y+ INNGVY+ GFA K   Y+  V  V+E LDK E+IL       K +Y               G++LTEADIRL+ T+I FD VY  HFKCN   +R  YP +  + +++Y    +   T +  HIK HY  SH  I   GI PL P  D
Sbjct:  130 ATNEPHYGYKRISDLYYKSDPQYSARFTVPV------------------------------LWDLETQTIVNNESSEIIRILNSSAFDEFVD-DDHKKTDLVPAQLKTQIDDFNSWVYDSINNGVYKTGFAEKAEVYESEVNNVFEHLDKVEKILSDKYSKLKAKYGEEDRQKILGEFFTVGDQLTEADIRLYTTVIRFDPVYVQHFKCNFTSIRAGYPFIHLWVRNLYWNYDAFRYTTDFDHIKLHYTRSHTRINPLGITPLGPKPD 366          
BLAST of DY258705 vs. ExPASy Swiss-Prot
Match: GTO3_YEAST (Glutathione S-transferase omega-like 3 OS=Saccharomyces cerevisiae GN=GTO3 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 6.306e-30
Identity = 90/268 (33.58%), Postives = 125/268 (46.64%), Query Frame = 1
Query:  106 DPLNGAKTIRDLYELASTNYSGKFTVPVCSLN**SPFEYCSLCLHVLTYLSGFVLY*VLWDKKLKTIVNNESAEIIRMFNTE-FNDIA--ENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEILGKQ------------------RYIC-GNRLTEADIRLFVTLITFDEVYAVHFKCNKILLR-EYPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYGSHPSIYRYGIIPLAPDIDYSSP 837
            +P  G K + D Y     +Y G+FTVPV                              LWD +  TIVNNES++II + N+  F++    E   + L P     QI   N W+Y+ INNGVY+ GFA     Y+  V  +++ LDK E +L K+                  RY   G+ LTEAD+RL+ T++ FD VY  HFKCN   +R +Y  +  + K+IY +  +   T +  HIK  Y  S P +   GI PL P  D   P
Sbjct:  129 EPHYGYKRLSDFYFKTKPDYKGRFTVPV------------------------------LWDLETCTIVNNESSDIIGIMNSAAFDEFVGEEYRQVRLVPRSLEAQITEFNSWVYDKINNGVYKAGFAECAEVYEREVTSLFQYLDKLENLLDKKYTDLEAEYGKNNKDKILDRYFAIGDTLTEADVRLYPTIVRFDVVYHQHFKCNLATIRDDYSRIHTWLKNIYWRHEAFQRTTDFTHIKLGYTRSQPRVNPIGITPLGPKPDIRPP 366          
BLAST of DY258705 vs. ExPASy Swiss-Prot
Match: GTO1_YEAST (Glutathione S-transferase omega-like 1 OS=Saccharomyces cerevisiae GN=GTO1 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.189e-28
Identity = 93/270 (34.44%), Postives = 126/270 (46.67%), Query Frame = 1
Query:  106 DPLNGAKTIRDLYELASTNYSG-KFTVPVCSLN**SPFEYCSLCLHVLTYLSGFVLY*VLWDKKLKTIVNNESAEIIRMFNT----EFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEIL-------------GKQR-----YICGNRLTEADIRLFVTLITFDEVYAVHFKCNKILLRE-YPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYG---SHPSIYRYGIIPLAPDIDYS 831
            DP+     + +LY L    Y G KFTVPV                              LWD K + IVNNES +IIR+ N+    EF    E   +DL P D  D+ID   +W++  IN GVY+ G A     Y+  VK ++E L K E +L              KQ+     ++ G RLTEADIRL+ ++I FD VY  HFKCN   +R+ +P L  +  ++Y        T +  HIK  Y     S   I ++GI+PL P  D S
Sbjct:  115 DPVENISRLSELYYLNDPKYPGTKFTVPV------------------------------LWDSKTRKIVNNESGDIIRILNSGVFDEFIQSEETNVIDLVPHDLIDEIDKNIKWVHPKINLGVYKVGLAENGKIYETEVKTLFENLQKMECVLKENYKRLEEQFSGNKQKILAKYFVLGQRLTEADIRLYPSIIRFDVVYVQHFKCNLKTIRDGFPYLHLWLINLYWNYAEFRFTTDFNHIKLFYIRMEVSRNKINQFGIVPLGPKPDIS 354          
The following BLAST results are available for this feature:
BLAST of DY258705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
YQJG_ECOLI3.548e-5745.08Uncharacterized protein yqjG OS=Escherichia coli (... [more]
GTO2_SCHPO3.444e-4439.62Glutathione S-transferase omega-like 2 OS=Schizosa... [more]
GTO2_YEAST4.078e-3738.43Glutathione S-transferase omega-like 2 OS=Saccharo... [more]
GTO3_YEAST6.306e-3033.58Glutathione S-transferase omega-like 3 OS=Saccharo... [more]
GTO1_YEAST1.189e-2834.44Glutathione S-transferase omega-like 1 OS=Saccharo... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3AE07FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258705 ID=DY258705; Name=DY258705; organism=Citrus clementina; type=EST; length=1192bp
CATTTTGCAGTCAGTCCAACCCATTTGGGAACAACAAAAGAAACCGATGA
GCATATGGGATGGGTTTTTCCGGCTACCAATACTGAGGAACCAGGAGCTG
AGCCTGACCCTTTAAATGGAGCCAAAACCATAAGAGACCTGTATGAGCTC
GCAAGTACAAACTACTCAGGGAAGTTCACTGTCCCCGTATGTTCACTTAA
CTAGTGATCTCCATTTGAATATTGTTCTCTATGTTTGCATGTGCTAACTT
ACTTGAGTGGTTTTGTTCTATACTAGGTACTGTGGGATAAGAAGTTGAAG
ACGATTGTTAATAATGAGAGTGCGGAGATAATCCGCATGTTTAATACGGA
ATTCAATGATATAGCTGAAAATGCTTCTCTGGATCTACATCCATCTGATC
AGCGAGATCAAATTGATGGGACTAATGAATGGATATACAATGGGATAAAC
AATGGTGTTTATCGATGTGGGTTTGCAACGAAGCAAGGACCTTATGATGA
AGCTGTTAAGCAGGTGTACGAAGCATTGGACAAATGTGAAGAGATACTTG
GCAAGCAACGATACATTTGTGGAAACAGGCTGACTGAAGCAGATATTCGG
TTGTTTGTCACGCTTATAACATTTGATGAGGTTTATGCAGTTCACTTCAA
GTGCAACAAGATACTATTACGAGAATATCCAAATCTGTTCAACTACACCA
AAGACATATATCAGATTCCCAGCATGTCTAGCACTGTGAATATGCAACAC
ATCAAGCGGCATTACTATGGGAGCCATCCTTCTATCTATCGATATGGGAT
CATCCCTCTTGCCCCTGATATCGATTATTCTTCACCCCATGACCGAGAAA
AATTTTCCTGCATAATTTCCATATTTCTACAGTGGCTAAGAAGGAGCTTG
GTCATTGTTTATAAAACCATTTTCCGTTTAGACTGGCAATTCCAAAAGGT
GTAATTTTCCGGTGGGGGGAGGGTATTAAAATAATTTTAATTGGGGACGG
CTCCCCCCCGTGAAAAAACTTTGGGAAAAAAAATTTTTCGGGGCATCGGG
GAGGGTTTACGGGGGATTTTTTCTTAAAGGTTTGGGGGAATTTGGCCCTT
TTTTTTAAAAGAAAAAATGGGGAAATGTAATTTTTTTTCTTCCCCCTTAC
GAAAAAATTTCCTTTTGGAGAGGTGGGGGGGGTTTCCTTTCG
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