DY258719

Overview
NameDY258719
Unique NameDY258719
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length892
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1215 contig Ccv1_Contig1215:1..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258719 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 5.922e-77
Identity = 141/162 (87.04%), Postives = 151/162 (93.21%), Query Frame = 2
Query:   71 EAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTPDD 556
            E PEISKWE++IWL+I+TAW+S+LS Y+VDAIEGAS SW IPISFISVILLPIVGNAAEHA AIMFAMKDKLD+SLGVAIGSS QISMF +PFCVVIGW+MG  MDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDP  DD
Sbjct:  279 EDPEISKWEAIIWLSILTAWVSLLSGYLVDAIEGASVSWKIPISFISVILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIGSSIQISMFAVPFCVVIGWMMGAQMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPHQDD 440          
BLAST of DY258719 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 3.250e-75
Identity = 137/161 (85.09%), Postives = 150/161 (93.17%), Query Frame = 2
Query:   71 EAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTPD 553
            E PEISKWE++IWL+I+TAW+S+LS Y+VDAIEGAS SWNIPI+FIS ILLPIVGNAAEHA AIMFAMKDKLD+SLGVAIGSS QISMF +PFCVVIGW+MG+ MDLNFQLFETA LFITVIVVAFFLQEG+SNYFKGLMLILCYLIVAASFFVHEDP  D
Sbjct:  279 EDPEISKWEAIIWLSILTAWVSLLSGYLVDAIEGASVSWNIPIAFISTILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIGSSIQISMFAVPFCVVIGWMMGQQMDLNFQLFETAMLFITVIVVAFFLQEGSSNYFKGLMLILCYLIVAASFFVHEDPHQD 439          
BLAST of DY258719 vs. ExPASy Swiss-Prot
Match: CAX6_ARATH (Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3)

HSP 1 Score: 269.626 bits (688), Expect = 1.669e-71
Identity = 135/159 (84.91%), Postives = 144/159 (90.57%), Query Frame = 2
Query:   71 EAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQ-EGTSNYFKGLMLILCYLIVAASFFVHEDP 544
            E PEISKWE++IWL+I TAW+S+LS Y+VDAIEG S SW IPISFISVILLPIVGNAAEHA AIMFAMKDKLD+SLGVAIGSS QISMF +PFCVVIGW+MG  MDLN QLFETATL ITVIVVAFFLQ EGTSNYFK LMLILCYLIVAASFFVHEDP
Sbjct:  287 EDPEISKWEAIIWLSIFTAWVSLLSGYLVDAIEGTSVSWKIPISFISVILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIGSSIQISMFAVPFCVVIGWMMGAQMDLNLQLFETATLLITVIVVAFFLQLEGTSNYFKRLMLILCYLIVAASFFVHEDP 445          
BLAST of DY258719 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 9.158e-70
Identity = 132/164 (80.49%), Postives = 148/164 (90.24%), Query Frame = 2
Query:   71 EAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTPDDNQ 562
            E  EI++ E++ WL ++T WISILS Y+VDAI+GAS S N+P++FISVILLPIVGNAAEHASAIMFAMKDKLDI+LGVAIGSSTQISMF IPFCVVIGWIMG+ MDLNFQLFETATLFITV+VVAF LQEGTSNYFKGLMLILCYLIVAASFFVH DP   +N+
Sbjct:  274 EEKEITQGEAICWLFVLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPDSSNNK 437          
BLAST of DY258719 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 2.040e-69
Identity = 129/163 (79.14%), Postives = 146/163 (89.57%), Query Frame = 2
Query:   71 EAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTPDDN 559
            E  EI  WES+ WLA++T W+SILS+Y+V+AIEGAS S N+P++FISVILLPIVGNAAEHASAIMFAMKDKLDI+LGVAIGSSTQISMF IPFCVVIGW+MG+ MDLNFQLFETATLFITV+VVAF LQ+G +NY KGLMLILCYLIVAASFFVH DP   D+
Sbjct:  255 EESEIGMWESIAWLAMLTLWVSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLILCYLIVAASFFVHVDPQSSDD 417          
BLAST of DY258719 vs. ExPASy Swiss-Prot
Match: CAX4_ORYSJ (Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.048e-65
Identity = 119/158 (75.32%), Postives = 141/158 (89.24%), Query Frame = 2
Query:   71 EAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDP 544
            E PEISK E++ W+AI  AWIS+LS Y+VDAI+GAS +WNIP++FISV+LLP+VGN+A HA+A+MFA+KDKLDISLGVAIGSS QISMFGIPFCVV+GW+MG+PMDLNF LFETA+L  TV+VVAF LQ+GTSN  KGLML LCYLIVAASF+VH DP
Sbjct:  279 EVPEISKREAISWIAIFIAWISMLSYYLVDAIDGASKAWNIPVAFISVVLLPVVGNSAGHANAVMFAVKDKLDISLGVAIGSSIQISMFGIPFCVVMGWMMGKPMDLNFHLFETASLLTTVLVVAFLLQDGTSNCVKGLMLFLCYLIVAASFYVHADP 436          
BLAST of DY258719 vs. ExPASy Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.266e-52
Identity = 98/165 (59.39%), Postives = 127/165 (76.97%), Query Frame = 2
Query:   71 EAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTPDDNQV 565
            E P I  W    WL  MT  I++LS+YVVD IE AS SW + +SFIS+ILLPIVGNAAEHA AI+FA K+KLDISLGVA+GS+TQIS+F +P  V++ WI+G  MDLNF + ET++L + +I+ AF LQ+GTS+Y KGL+L+LCY+I+AA FFV + P P+D  V
Sbjct:  281 ETPVIGFWSGFAWLVGMTIVIALLSEYVVDTIEDASDSWGLSVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISLFVVPLSVIVAWILGIKMDLNFNILETSSLALAIIITAFTLQDGTSHYMKGLVLLLCYVIIAACFFVDQIPQPNDLDV 445          
BLAST of DY258719 vs. ExPASy Swiss-Prot
Match: CAX1A_ORYSJ (Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.290e-51
Identity = 96/163 (58.90%), Postives = 126/163 (77.30%), Query Frame = 2
Query:   71 EAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTPDDN 559
            E P +    +L WLA+MTA IS+LS+YVV  IE  S SW + +SFIS+ILLPIVGNAAEHA AI+FA+K+KLDI+LGVA+GS+TQISMF +P  V++ WIMG  MDL+F+L ET +LF+ V+V AF LQ+GTS+Y KG++L+LCY+++ A FFV   P    N
Sbjct:  271 EEPALGFASALFWLALMTAVISVLSEYVVGTIEPTSQSWGLSVSFISIILLPIVGNAAEHAGAIIFALKNKLDITLGVALGSATQISMFVVPLSVLVAWIMGVQMDLDFKLLETGSLFMAVLVTAFTLQDGTSHYLKGILLLLCYIVIGACFFVARQPAGHAN 433          
BLAST of DY258719 vs. ExPASy Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.287e-47
Identity = 87/154 (56.49%), Postives = 120/154 (77.92%), Query Frame = 2
Query:   71 EAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFV 532
            + P +    ++IWLA+MT   ++LS YVV  IE AS SW + +SFIS+ILLPIVGNAAEHA A++FA+K+K+DI+LGV++GS+TQISMF +P  V++ W MG PMDL+F L ET +LF+ ++V AF LQEG S+Y KGL+L+LCY +++  FFV
Sbjct:  281 DEPVLGFSSAMIWLALMTLLTALLSGYVVSTIEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALKNKMDITLGVSLGSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGESHYLKGLILVLCYAVISVCFFV 434          
BLAST of DY258719 vs. ExPASy Swiss-Prot
Match: CAX1_ARATH (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3)

HSP 1 Score: 186.037 bits (471), Expect = 2.427e-46
Identity = 89/158 (56.33%), Postives = 117/158 (74.05%), Query Frame = 2
Query:   71 EAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDP 544
            E   IS W    WL  MT  I++LS+YVV  IE AS  WN+ +SFIS+ILLPIVGNAAEHA A++FA K+KLDISLGVA+GS+TQI +F +P  +++ WI+G  MDLNF   ET  L +++I+ AF LQ+G+S+Y KGL+L+LCY I+A  FFV + P
Sbjct:  279 ETAVISFWSGFAWLVGMTLVIALLSEYVVATIEEASDKWNLSVSFISIILLPIVGNAAEHAGAVIFAFKNKLDISLGVALGSATQIGLFVVPLTIIVAWILGINMDLNFGPLETGCLAVSIIITAFTLQDGSSHYMKGLVLLLCYFIIAICFFVDKLP 436          
The following BLAST results are available for this feature:
BLAST of DY258719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
CAX5_ARATH5.922e-7787.04Vacuolar cation/proton exchanger 5 OS=Arabidopsis ... [more]
CAX2_ARATH3.250e-7585.09Vacuolar cation/proton exchanger 2 OS=Arabidopsis ... [more]
CAX6_ARATH1.669e-7184.91Putative vacuolar cation/proton exchanger 6 OS=Ara... [more]
CAX2_ORYSJ9.158e-7080.49Vacuolar cation/proton exchanger 2 OS=Oryza sativa... [more]
CAX3_ORYSJ2.040e-6979.14Vacuolar cation/proton exchanger 3 OS=Oryza sativa... [more]
CAX4_ORYSJ1.048e-6575.32Putative vacuolar cation/proton exchanger 4 OS=Ory... [more]
CAX3_ARATH2.266e-5259.39Vacuolar cation/proton exchanger 3 OS=Arabidopsis ... [more]
CAX1A_ORYSJ7.290e-5158.90Vacuolar cation/proton exchanger 1a OS=Oryza sativ... [more]
CAX1B_ORYSJ1.287e-4756.49Vacuolar cation/proton exchanger 1b OS=Oryza sativ... [more]
CAX1_ARATH2.427e-4656.33Vacuolar cation/proton exchanger 1 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3AG04FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258719 ID=DY258719; Name=DY258719; organism=Citrus clementina; type=EST; length=892bp
CTATCTGCGAACTTAGGATGAGAATCAGACTGGGAATGATGCAGATCATG
GTGGTAATCATGATGATAATGAAGCTCCAGAGATCTCTAAATGGGAATCA
TTGATTTGGCTTGCAATAATGACAGCTTGGATCTCTATCCTATCACAGTA
TGTAGTTGATGCCATAGAGGGAGCGTCGGCTTCATGGAACATACCGATTT
CGTTTATAAGTGTTATCTTGCTCCCAATTGTAGGGAATGCTGCGGAGCAT
GCCAGTGCTATTATGTTTGCCATGAAAGACAAGCTTGACATATCTTTGGG
AGTGGCAATAGGGTCATCGACACAGATATCTATGTTTGGGATCCCATTTT
GCGTGGTTATTGGGTGGATAATGGGTCGACCTATGGACTTAAACTTTCAA
CTTTTTGAGACGGCAACTCTTTTCATAACTGTTATAGTTGTGGCATTCTT
TCTGCAGGAAGGAACTTCTAATTACTTTAAAGGACTCATGCTGATTCTTT
GCTATCTGATAGTAGCTGCTAGTTTCTTTGTGCATGAAGATCCTACTCCA
GATGATAATCAAGTAAAAACTTAGTTCATGAAAGCAGCAAATCGGCTTAT
GAGATGTATTTCCTGAAGCTACGGATCAACTTGGAGGCTGCTGTATATAT
TTATATATTCAGCTTCGAAACGCAGACAAGCCATTATCTCGACTTCCCTA
GCTCTTGCTCAGTAACATATTGAGCGGGTTTCTTGCTGTTTTTTGTGCTC
TATCCTTTCAATACCTGCTTTGGTGCTAAATGCTTATGACGAGTAAGAAA
AATGTGTATATCACAGAGAAAAACGGTTCATTTCTCCTTGCCTTGTACCT
CTTTCTCAATTCCTTTTGAAGAGATTTTCCTTTTGTTGCTTC
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