DY258724

Overview
NameDY258724
Unique NameDY258724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1126
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY258724 vs. ExPASy Swiss-Prot
Match: TIF8_ARATH (Protein TIFY 8 OS=Arabidopsis thaliana GN=TIFY8 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.933e-25
Identity = 68/174 (39.08%), Postives = 92/174 (52.87%), Query Frame = 2 
Query:  302 DLASVEKQVGNHLEGVPFYGTRSDVSGPEISNRLAGSKRSNSESGFMGHDYPENMHLMKILRNAAEGEQSKRSKDDEMFYRMQQLRPTSASVMLQPSNISRIDANVSRWERTNPVNVGPAVQYPLRGS-QLVPFMHQVPTNRFRDANAGPSIISQSAADEGSKTGIKGPGILNS 820
            DL       GNHL+G+  +G RSDVSG  +SNR +G+KRSNS+S F   ++PE +H  K+LRN                                P + S              +NV P    P RG  Q+   +HQ+ T+RF+D N GPS+I+Q+AADEGS+TG+KGPGIL+S
Sbjct:   81 DLVERHSGGGNHLDGIQLFGPRSDVSGSIMSNRFSGNKRSNSDSHFTTQEHPETLHWSKLLRNG-------------------------------PGSFS--------------MNVNPLANQPPRGGGQISHLLHQLSTSRFKDENVGPSVIAQTAADEGSRTGMKGPGILSS 209
The following BLAST results are available for this feature:
BLAST of DY258724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TIF8_ARATH1.933e-2539.08Protein TIFY 8 OS=Arabidopsis thaliana GN=TIFY8 PE... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3AH01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258724 ID=DY258724; Name=DY258724; organism=Citrus clementina; type=EST; length=1126bp
TGAAGCAGAAGCAGCGGCAGCAGTGTCAAATGGGGATGAGGAGATGGCCG
TACTGATAATGGTAATGGCTCAACAAAACAAACCCAACAACAGCAATGCT
ACAAACATTACTAAGAGCAGTGACAGTCAGCAGCAACTGAAGGTGAAGCC
AATGTTATACGACTTTCTGGGCATGAAGCCCTCCCCGGATTGTTTGCCTG
TCGTTTTGGCTCCAAAGCCTGCCGTTTCGGAGCCCTCTCTGGCTTCAGTT
GGTGCTTCTTCTGCTGCTGGTGGTGGCCGTGGGCCCATCTCTTCTTCATC
TGATCTTGCTTCTGTAGAAAAGCAGGTCGGAAATCATCTTGAGGGGGTTC
CATTCTATGGTACAAGGAGCGATGTTTCTGGGCCTGAGATTAGCAACAGA
TTAGCAGGAAGTAAGCGAAGTAATTCAGAATCTGGCTTCATGGGTCATGA
CTACCCTGAGAACATGCATTTGATGAAGATTCTTAGAAATGCTGCAGAAG
GAGAGCAATCAAAAAGGTCCAAAGATGATGAGATGTTTTATCGCATGCAG
CAACTAAGGCCAACTTCTGCCTCTGTTATGTTACAGCCCTCCAATATCAG
TAGAATTGATGCCAATGTTTCTAGATGGGAGCGGACAAATCCTGTGAATG
TTGGCCCTGCTGTACAGTACCCTCTACGCGGGAGCCAATTAGTGCCTTTT
ATGCATCAAGTACCTACAAACAGGTTCAGGGATGCCAATGCTGGTCCTTC
AATTATCTCTCAATCCGCTGCTGATGAAGGATCTAAAACGGGGATTAAAG
GCCCCGGTATTTTGAATTCTATTAATGCTATTGGTGGCCTCTCTGAGAAA
AACTCATCTGGCACCTCTGCCCGGTGGAACCAGGCCCAAGTCCGGGAACT
GTTATTTTGGAACCCTGAATCTTCCTACTCAAATCCGCCAAGAATTAACC
TTCCGGCTGGCAGGCCAAATGACTAATATTTTTTGGGTGGGGCCAACTTC
ATGGTTTTTTAAAGAAAGTCCCCACCCCAAAAAAAGGGAAAAATTTTATA
AATGGGGCGTTAACTGGGGAACCAAAATGGGGGGAAATTTTTTGGTCCCA
CAAAACCCCACCCCCCCCAAAAAATT
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