DY258729

Overview
NameDY258729
Unique NameDY258729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1012
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258729 vs. ExPASy Swiss-Prot
Match: UCP7_SCHPO (UBA domain-containing protein 7 OS=Schizosaccharomyces pombe GN=ucp7 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.746e-18
Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 3
Query:  135 QAQRDQAERHRIAETLDVEIKRWAAGKEGNIRALLATMQYVLWPESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            +A++   ER R+ E +   + +W  GKE N+RALLA++  +LWPE  WQ VSL++L+    VK  Y KA   +HPDK+ Q+  +++ + IAE  F +L  AW  F  +
Sbjct:  588 KAEQLDEERSRLREPVQQIVNKWKEGKESNLRALLASLDTILWPECRWQKVSLSELVLPKKVKIAYMKAVSRVHPDKLPQQ-TSVEHQLIAESAFSILNHAWELFKQQ 694          
BLAST of DY258729 vs. ExPASy Swiss-Prot
Match: GAK_MOUSE (Cyclin G-associated kinase OS=Mus musculus GN=Gak PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.044e-15
Identity = 48/127 (37.80%), Postives = 73/127 (57.48%), Query Frame = 3
Query:   81 RTQERAAKALAEKNERDLQAQRDQAERHRIAETLDVEIKRWAAGKEGNIRALLATMQYVLWP-ESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            ++ ++  K +AE  +++L    D          L +++  W  GKE NIRALL+T+  VLW  ES W PVS+ DL+T   VKK YR+A L +HPDK    G   +Q   A+ +F  L +AW++F ++
Sbjct: 1186 KSDKKGPKTMAEMRKQELARDTDP---------LKLKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVSMADLVTPEQVKKQYRRAVLVVHPDKA--TGQPYEQ--YAKMIFMELNDAWSEFENQ 1299          
BLAST of DY258729 vs. ExPASy Swiss-Prot
Match: GAK_HUMAN (Cyclin G-associated kinase OS=Homo sapiens GN=GAK PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.044e-15
Identity = 47/127 (37.01%), Postives = 70/127 (55.12%), Query Frame = 3
Query:   81 RTQERAAKALAEKNERDLQAQRDQAERHRIAETLDVEIKRWAAGKEGNIRALLATMQYVLWP-ESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            R+ ++  K +AE  ++DL    D          L +++  W  GKE NIRALL+T+  VLW  ES W PV + DL+    VKK YR+A L +HPD    K A    +  A+ +F  L +AW++F ++
Sbjct: 1192 RSDKKGPKTIAEMRKQDLAKDTDP---------LKLKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVGMADLVAPEQVKKHYRRAVLAVHPD----KAAGQPYEQHAKMIFMELNDAWSEFENQ 1305          
BLAST of DY258729 vs. ExPASy Swiss-Prot
Match: AUXI_HUMAN (Putative tyrosine-protein phosphatase auxilin OS=Homo sapiens GN=DNAJC6 PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 2.669e-15
Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 3
Query:  126 RDLQAQRDQAE--RHRIAETLDVE---IKRWAAGKEGNIRALLATMQYVLWP-ESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            +D +  R  AE  +  +A+ +D E   I  W  GKE NIRALL+TM  VLW  E+ W+PV + DL+T   VKK YRKA L +HPDK    G   +Q   A+ +F  L +AW++F ++
Sbjct:  795 KDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKA--TGQPYEQ--YAKMIFMELNDAWSEFENQ 907          
BLAST of DY258729 vs. ExPASy Swiss-Prot
Match: AUXI_BOVIN (Putative tyrosine-protein phosphatase auxilin OS=Bos taurus GN=DNAJC6 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.669e-15
Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 3
Query:  126 RDLQAQRDQAE--RHRIAETLDVE---IKRWAAGKEGNIRALLATMQYVLWP-ESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            +D +  R  AE  +  +A+ +D E   I  W  GKE NIRALL+TM  VLW  E+ W+PV + DL+T   VKK YRKA L +HPDK    G   +Q   A+ +F  L +AW++F ++
Sbjct:  792 KDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKA--TGQPYEQ--YAKMIFMELNDAWSEFENQ 904          
BLAST of DY258729 vs. ExPASy Swiss-Prot
Match: GAK_RAT (Cyclin G-associated kinase OS=Rattus norvegicus GN=Gak PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.553e-15
Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 3
Query:   81 RTQERAAKALAEKNERDLQAQRDQAERHRIAETLDVEIKRWAAGKEGNIRALLATMQYVLWP-ESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            ++ ++  K +AE  +++L    D  +         +++  W  GKE NIRALL+T+  VLW  ES W PVS+ DL+T   VKK YR+A L +HPDK    G   +Q   A+ +F  L +AW++F ++
Sbjct: 1186 KSDKKGPKTMAEMRKQELARDTDPFK---------LKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVSMADLVTPEQVKKQYRRAVLVVHPDKA--TGQPYEQS--AKMIFMELNDAWSEFENQ 1299          
BLAST of DY258729 vs. ExPASy Swiss-Prot
Match: AUXI_MOUSE (Putative tyrosine-protein phosphatase auxilin OS=Mus musculus GN=Dnajc6 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 5.946e-15
Identity = 49/117 (41.88%), Postives = 70/117 (59.83%), Query Frame = 3
Query:  126 RDLQAQRDQAE--RHRIAETLDVE---IKRWAAGKEGNIRALLATMQYVLWP-ESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            +D +  R  AE  +  +A+ +D E   I  W  GKE NIRALL+TM  VLW  E+ W+PV + DL+T   VKK YR+A L +HPDK    G   +Q   A+ +F  L +AW++F ++
Sbjct:  820 KDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRRAVLVVHPDKA--TGQPYEQ--YAKMIFMELNDAWSEFENQ 932          
The following BLAST results are available for this feature:
BLAST of DY258729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
UCP7_SCHPO5.746e-1839.81UBA domain-containing protein 7 OS=Schizosaccharom... [more]
GAK_MOUSE2.044e-1537.80Cyclin G-associated kinase OS=Mus musculus GN=Gak ... [more]
GAK_HUMAN2.044e-1537.01Cyclin G-associated kinase OS=Homo sapiens GN=GAK ... [more]
AUXI_HUMAN2.669e-1542.74Putative tyrosine-protein phosphatase auxilin OS=H... [more]
AUXI_BOVIN2.669e-1542.74Putative tyrosine-protein phosphatase auxilin OS=B... [more]
GAK_RAT4.553e-1537.01Cyclin G-associated kinase OS=Rattus norvegicus GN... [more]
AUXI_MOUSE5.946e-1541.88Putative tyrosine-protein phosphatase auxilin OS=M... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3AH08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258729 ID=DY258729; Name=DY258729; organism=Citrus clementina; type=EST; length=1012bp
CTGGATCATCAGCTGGAGAGTTCCAAGATGTTGAAGGGGAAACTGAAGAA
AGACGAAGAGCCAGGTTAGAACGCCACCAAAGGACGCAGGAGCGTGCGGC
AAAAGCTCTGGCTGAGAAGAATGAACGTGACCTTCAAGCCCAAAGGGATC
AAGCTGAGAGACATAGGATTGCAGAAACTCTTGATGTTGAAATTAAGCGC
TGGGCTGCTGGAAAAGAAGGGAATATACGCGCTCTCTTAGCTACAATGCA
ATATGTGCTCTGGCCTGAAAGTGGTTGGCAACCTGTTTCTTTGACTGATT
TGATTACTGCTGCTGCGGTTAAAAAGTGTTATAGAAAGGCAACTTTATGC
ATCCATCCTGATAAAGTGCAACAAAAAGGAGCCAATCTCCAACAGAAGTA
TATTGCTGAGAAGGTGTTTGATTTGCTTAAGGAAGCTTGGAACAAGTTCA
ATTCGGAGGAGCTCTTCTGAGTTCAAGTAACAATTATTTTACTCAAACTT
CTTGATTCTTGGGAGTGGAACCATATTGACTGTCTCAGCTGATACATTCT
TCAATCTGCTGTCACATTCTGCTTCAATTCACGTCATATTATGTCTATCA
GCTGATAAGAGGGAGGCTCGGGGGCCCTTTCGCATATGCCAAGATGCCTA
TGTCCAAGTGTCTGCGCGCTATTCTTTTGCTGTAAACAAATGTTCCTGCA
TATGCATCAGGAGGTGTAATCTTTTGTTCGTGTAGAGTAATATTTGGTGC
TCGAGTTCAGTCATCCCATTTTCATGAGACGGACGTTTGTATTTTTTTGT
GGGTGTTATTCATTTATAGTTATTATTTTCCGGGGGGGGTTTTTTTTGGC
CCGGGGGGTCTTTGGTATTTGGAGTGGAAAACCATTATGGTTCGTTACTA
ATCAAACCGACCTGAATGATTGAATCCTTGGATGAATTGCTTGCGTTGGG
AAACCAAACTTCTTGGGCAGGACGTGGGCAATATAATGGTATCCATTTTC
CTTCCTTTCCCC
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