DY258769

Overview
NameDY258769
Unique NameDY258769
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1038
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1232 contig Ccv1_Contig1232:1..1038. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258769 vs. ExPASy Swiss-Prot
Match: SYP32_ARATH (Syntaxin-32 OS=Arabidopsis thaliana GN=SYP32 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.615e-15
Identity = 44/67 (65.67%), Postives = 48/67 (71.64%), Query Frame = 2
Query:    8 DGESQPLLXXXXXXXXXXXXXMVPLQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIR 208
            +GES PLL             MVPLQD+YMQ RAEAL  VESTIHEL +IF QLAT+VSQQGEIAIR
Sbjct:  229 EGESSPLLQQSQQQQQQQQQQMVPLQDTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEIAIR 295          
The following BLAST results are available for this feature:
BLAST of DY258769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SYP32_ARATH1.615e-1565.67Syntaxin-32 OS=Arabidopsis thaliana GN=SYP32 PE=2 ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3BE08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258769 ID=DY258769; Name=DY258769; organism=Citrus clementina; type=EST; length=1038bp
GAAGCAGGATGGGGAGAGTCAGCCATTATTGCAGCAGCAACAGCACCATC
AGCAACAACAGCAACAGCAGATGGTTCCATTGCAAGACAGTTACATGCAG
AGCAGAGCTGAAGCTCTTCAGAATGTAGAGTCTACCATCCATGAGCTGGG
CAACATCTTCAACCAGCTTGCGACCCTGGTCTCTCAGCAAGGGGAGATTG
CTATCAGGTATTATTTATTTTCTAGAAATAACTCGGTTGCTCTTTGCCAA
ACAATGCTTTATTCTGATCTTTCACATGCCTTGTAGATTATAGTTTTAAA
TAGTACTTTATATTCTAGGTTTGATATGTACCATGATTATGTATATACAG
CCATTAACAGATTGAATATAAGTTAATTTCCCAACTCGTGACTGAAGTTC
AATTTATTAGTTTAAGATGGCTGAGAAAAGCTTAGGTAAGGCTTCTCACA
CAGATCTGGTAATGCGAATTTAGACATACTCAACTGAGTGTAGAGACAAA
TATAGTTTTTCAAGAATTTTTGTGGAATAAGATGGGTAGCATATTTTTTT
GTGGTTAAAATTTTCACTGACAGCTTTAGGTAGTTGCTGCATAAATTTGA
AATTCATGGGTGCCTCTATTACGTTAATGTGAAATGATATTGTCGACCGG
AGGGCATGATCATTTCCATTAATTGTCTTGTAAGTTTTGAAAAATTTAGT
CAACTCATAACAGTATGTTGAAACATTTTCAACCAATGCTCTCTTGCATC
AACTGAAAGGATTCTACTTTGATGCGAGACAGTTGCTTGCATATATGTTC
TGCATGTGAACAATTTTTGTGATTGATGAGTGAAATGTATGTTGCAGGAT
TGATGAAAACATGGATGACCCCTTGGCAATGTAGAAGGGGCACAGGGAAC
TTTGCTCAAGTACCTCACCAGAATATCGCCCAATAAGGGGGCAAAGGATC
AAAAAATTCCTTTGAATTGATTTTTTTCCCTTATGAATTTTCCTATTCTT
TGGGGGCCCAATCCCAAACAAAAAAAACACCCAAATTT
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