DY258771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258771 vs. ExPASy Swiss-Prot
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 9.622e-29 Identity = 68/121 (56.20%), Postives = 85/121 (70.25%), Query Frame = 1 Query: 406 VEKKTKEETHRFLEMDEILKKTLIGHD*PEKGTNRANQSVLXXXXXXXXXXASFIVSGPSGVGRAEVAKALAAYYFGSEEAMIRLDMTEFMGKRTVSQLSVSPPGYVGYPDGDQLKDAVRR 768 VEK + +E+ R L+M+E L +IG D K +RA + ASFI SGP+GVG++E+AKALAAYYFGSEEAMIRLDM+EFM + TVS+L SPPGYVGY +G QL +AVRR Sbjct: 586 VEKVSTDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 706
BLAST of DY258771 vs. ExPASy Swiss-Prot
Match: CLPC_PEA (ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.799e-28 Identity = 66/121 (54.55%), Postives = 86/121 (71.07%), Query Frame = 1 Query: 406 VEKKTKEETHRFLEMDEILKKTLIGHD*PEKGTNRANQSVLXXXXXXXXXXASFIVSGPSGVGRAEVAKALAAYYFGSEEAMIRLDMTEFMGKRTVSQLSVSPPGYVGYPDGDQLKDAVRR 768 V+K + +E+ R L+M++ L K +IG D + +RA + ASFI SGP+GVG++E+AKALAAYYFGSEEAMIRLDM+EFM + TVS+L SPPGYVGY +G QL +AVRR Sbjct: 586 VDKVSADESDRLLKMEDTLHKRIIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 706
BLAST of DY258771 vs. ExPASy Swiss-Prot
Match: CLPAA_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic OS=Solanum lycopersicum GN=CD4A PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 8.145e-28 Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 406 VEKKTKEETHRFLEMDEILKKTLIGHD*PEKGTNRANQSVLXXXXXXXXXXASFIVSGPSGVGRAEVAKALAAYYFGSEEAMIRLDMTEFMGKRTVSQLSVSPPGYVGYPDGDQLKDAVRR 768 VEK + +E+ R L+M+E L +IG D K +RA + ASFI SGP+GVG++E+AK+LA YYFGSEEAMIRLDM+EFM + TVS+L SPPGYVGY +G QL +AVRR Sbjct: 589 VEKVSTDESDRLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 709
BLAST of DY258771 vs. ExPASy Swiss-Prot
Match: CLPA_BRANA (ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplastic (Fragment) OS=Brassica napus GN=CLPA PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.536e-26 Identity = 65/123 (52.85%), Postives = 83/123 (67.48%), Query Frame = 1 Query: 400 VCVEKKTKEETHRFLEMDEILKKTLIGHD*PEKGTNRANQSVLXXXXXXXXXXASFIVSGPSGVGRAEVAKALAAYYFGSEEAMIRLDMTEFMGKRTVSQLSVSPPGYVGYPDGDQLKDAVRR 768 + VEK + +E+ L+M+E L K +IG D K +RA + ASFI GP+GVG++E+AKALAAYYFG EEAMIRLDM+EFM + TVS+L SPPGYVGY + QL +AVRR Sbjct: 532 ILVEKVSTDESDLLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFFGPTGVGKSELAKALAAYYFGCEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEPPQLTEAVRR 654
BLAST of DY258771 vs. ExPASy Swiss-Prot
Match: CLPC_GUITH (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 2.897e-25 Identity = 59/121 (48.76%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 406 VEKKTKEETHRFLEMDEILKKTLIGHD*PEKGTNRANQSVLXXXXXXXXXXASFIVSGPSGVGRAEVAKALAAYYFGSEEAMIRLDMTEFMGKRTVSQLSVSPPGYVGYPDGDQLKDAVRR 768 V K T+ E+ + L+M+E L +IG D ++A + ASFI SGP+GVG+ E+ KALA+Y+FGSEEAM+RLDM+E+M + TVS+L SPPGYVGY +G QL ++VRR Sbjct: 489 VNKMTRSESEKLLQMEETLHGRIIGQDEAVVAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTESVRR 609
BLAST of DY258771 vs. ExPASy Swiss-Prot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.878e-24 Identity = 57/121 (47.11%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 406 VEKKTKEETHRFLEMDEILKKTLIGHD*PEKGTNRANQSVLXXXXXXXXXXASFIVSGPSGVGRAEVAKALAAYYFGSEEAMIRLDMTEFMGKRTVSQLSVSPPGYVGYPDGDQLKDAVRR 768 V K TK E+ + L M+E L ++G + ++A + ASFI SGP+GVG+ E+ KA+A+Y+FGSEEAM+RLDM+E+M + TVS+L SPPGYVGY +G QL +AVR+ Sbjct: 522 VSKLTKSESEKLLHMEETLHSRIVGQNEAVIAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKAMASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRK 642
BLAST of DY258771 vs. ExPASy Swiss-Prot
Match: CLPC_PORPU (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra purpurea GN=clpC PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 7.136e-24 Identity = 58/121 (47.93%), Postives = 79/121 (65.29%), Query Frame = 1 Query: 406 VEKKTKEETHRFLEMDEILKKTLIGHD*PEKGTNRANQSVLXXXXXXXXXXASFIVSGPSGVGRAEVAKALAAYYFGSEEAMIRLDMTEFMGKRTVSQLSVSPPGYVGYPDGDQLKDAVRR 768 V K TK E+ + ++M+E L +IG D +RA + ASFI SGP+GVG+ E+ KALA+Y+FGSE +MIRLDM+E+M + TVS+L SPPGYVGY +G L +AVR+ Sbjct: 492 VTKLTKSESEKLMQMEETLHGRIIGQDEAVIAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIGSPPGYVGYSEGGYLTEAVRK 612
BLAST of DY258771 vs. ExPASy Swiss-Prot
Match: CLPC_PORYE (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 9.319e-24 Identity = 58/121 (47.93%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 406 VEKKTKEETHRFLEMDEILKKTLIGHD*PEKGTNRANQSVLXXXXXXXXXXASFIVSGPSGVGRAEVAKALAAYYFGSEEAMIRLDMTEFMGKRTVSQLSVSPPGYVGYPDGDQLKDAVRR 768 V K TK E+ + + M+E L +IG D +RA + ASFI SGP+GVG+ E+ KALA+Y+FGSE +MIRLDM+E+M + TVS+L SPPGYVGY +G L +AVR+ Sbjct: 492 VTKLTKSESEKLMHMEETLHGRIIGQDEAVVAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEASMIRLDMSEYMERHTVSKLIGSPPGYVGYSEGGYLTEAVRK 612
BLAST of DY258771 vs. ExPASy Swiss-Prot
Match: CLPB_PLEBO (Chaperone protein clpB OS=Plectonema boryanum GN=clpB PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 2.295e-22 Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 406 VEKKTKEETHRFLEMDEILKKTLIGHD*PEKGTNRANQSVLXXXXXXXXXXASFIVSGPSGVGRAEVAKALAAYYFGSEEAMIRLDMTEFMGKRTVSQLSVSPPGYVGYPDGDQLKDAVRR 768 V K + E + L++D++L + +IG D + A Q ASFI GP+GVG+ E+AKALAA+ F +EEAM+R+DM+E+M K +VS+L +PPGYVGY +G QL +AVRR Sbjct: 555 VSKLVESEMQKLLQLDDVLHQRVIGQDEAVTAVSDAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAAFLFDTEEAMVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQLTEAVRR 675
BLAST of DY258771 vs. ExPASy Swiss-Prot
Match: CLPB1_THEEB (Chaperone protein clpB 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB1 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 3.315e-21 Identity = 53/121 (43.80%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 406 VEKKTKEETHRFLEMDEILKKTLIGHD*PEKGTNRANQSVLXXXXXXXXXXASFIVSGPSGVGRAEVAKALAAYYFGSEEAMIRLDMTEFMGKRTVSQLSVSPPGYVGYPDGDQLKDAVRR 768 V K + E + L ++E L K ++G D A Q ASFI GP+GVG+ E+AKALAA+ F +EEA++R+DM+E+M K VS+L +PPGYVGY +G QL +A+RR Sbjct: 553 VSKLVESEAQKLLHLEEELHKRVVGQDEAVSAVAEAIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAFMFDTEEALVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAIRR 673 The following BLAST results are available for this feature:
BLAST of DY258771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258771 ID=DY258771; Name=DY258771; organism=Citrus clementina; type=EST; length=1245bpback to top |