DY258776

Overview
NameDY258776
Unique NameDY258776
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1292
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY258776_ssr856 microsatellite DY258776_ssr856:856..867. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of DY258776 vs. ExPASy Swiss-Prot
Match: WUN1_SOLTU (Wound-induced protein 1 OS=Solanum tuberosum GN=WUN1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.725e-28
Identity = 67/107 (62.62%), Postives = 75/107 (70.09%), Query Frame = 2 
Query:  326 FVFVPLSITSFGPIVLAEGCDHSRQISWVHAWTVADGIITQVREYFNTSLTVTRFGKDLSGQSQRKKSPPSDFPSTAEINPVHCPSVWESSVSNRDGKSVPGLVLAL 646
            F F+  +I  FG +VL EGCD +R I+WVHAWTV DG+ITQVREYFNTSLTVTRFGK             SD  S   I  +HCPSVWESS+ NR GKSVPGLVLAL
Sbjct:   15 FQFLHKTIDVFGSVVLVEGCDPTRSITWVHAWTVTDGVITQVREYFNTSLTVTRFGK-------------SDISS---ITTLHCPSVWESSLPNRVGKSVPGLVLAL 105
The following BLAST results are available for this feature:
BLAST of DY258776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WUN1_SOLTU1.725e-2862.62Wound-induced protein 1 OS=Solanum tuberosum GN=WU... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3BF09FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258776 ID=DY258776; Name=DY258776; organism=Citrus clementina; type=EST; length=1292bp
CCAGTTCTCTCTGGTAACCCTTATCCAGAATCACAAAACAAATTCATTTC
ATCTTCAGTTTCTCTGTTTTTGTTGTTGCCATTTTTTAAGGCTATTCCGT
CAAGAACTGGCTAACTCTCAGCAGAAAAATCCGGAAGATTCCGAAAACAA
GAACCAGCGCGTGGTTCTTGCTCTGTATGATGCCTTAAAATCTCGAGACG
TTGAAACGGTACACAAGATCCTTGCCCCGGACCTAGAGTGGTGGTTCCAT
GGCCCGCCGACCCACCAGTTTATGATGCACCTTCTCACCGGCAGCACCAC
CGCATCGTCAGCATCGCAAAGCTCCTTCGTATTCGTTCCTCTCTCGATCA
CATCGTTCGGGCCCATTGTCCTCGCCGAGGGCTGTGATCACAGCCGTCAA
ATCAGCTGGGTCCACGCCTGGACGGTCGCTGATGGGATAATTACTCAAGT
CAGAGAATACTTCAACACTTCGCTTACCGTCACCCGCTTCGGTAAAGACT
TGTCTGGCCAAAGTCAGAGGAAGAAATCACCACCCTCTGATTTCCCATCA
ACAGCGGAGATTAATCCGGTGCATTGCCCCTCCGTTTGGGAGAGCAGCGT
CTCCAACCGGGACGGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAG
CAAACCAAAAAAGGGACCGAGATTGATCCTGTGCAGCCGCGTGTATTATA
ATATTATACCATATTAACATATAAATAAAGGCTGCACGTGACGCGTGTCG
CCCCCGTGTGGGCCGTCGCTTAGAGATGTGAGTGACTGANGCCCTGGTTG
GGGGGAGTGCTTTTGGGTTGTTTTCCCCCTTTAATTTTGTGTCTGGCTTT
CCGGGGTTTGTTTGTTTGATATGTTGGGTCTTTCCGGGTCCGGATCATGA
AGGGGTGAACCCGAACTCCGTTTGGTTGTATCCAGCTGGTTGTTTATGTA
AATTGGTGGCTTTTGATTAACGAAATAAAAAATGGTTTTGTTTTAATAAA
ACTTTTTTTTTGGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCA
CTCTTTTTGTGTAAAAAGGTTGGGCATTTAAAAAAAAAAACTTTGCTTTA
AATCATTTTGTGTTGCAACCAAAAAGGGGCCCCCAATATCGCCCAAAAAA
AAAAAATCAATTTTTTATTTTCCCCCTCCCCCGGCTCATATACCACCCCC
CCCAAAAAAGGGGGAAGCCTGCCATATTTAAACCCCGGGTGGCTCCCTAA
AAAGGCTCTTTTTTTTCTTCCCGCGGCGGCCCGCCCCCCCCC
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