DY258791

Overview
NameDY258791
Unique NameDY258791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7856 contig Ccv1_Contig7856:1076..1890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258791 vs. ExPASy Swiss-Prot
Match: HYDA_PSEAE (D-hydantoinase/dihydropyrimidinase OS=Pseudomonas aeruginosa GN=dht PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.241e-47
Identity = 89/186 (47.85%), Postives = 127/186 (68.28%), Query Frame = 1
Query:    1 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFNYLFHGLDK 558
            TAA YVMSPP R   H +AL   L +G L    TDHC F + QKA G DDF KIPNG  GIE+RM L+WD  V SG++S+ ++V LTST  A+IFN++PRKGAI VG+DAD+++++P  S  ++A +HH R+D N++EGR V+G    TI+ G+++W   +L   PG+G+Y+E   +  ++  L +
Sbjct:  282 TAAGYVMSPPFRPVEHQEALWRGLQSGNLHTTATDHCCFCAEQKAMGRDDFSKIPNGTAGIEDRMALLWDAGVNSGRLSMHEFVALTSTNTAKIFNLFPRKGAIRVGADADLVLWDPQGSRTLSAATHHQRVDFNIFEGRTVRGIPSHTISQGKLLWAAGDLRAEPGAGRYVERPAYPSVYEVLGR 467          
BLAST of DY258791 vs. ExPASy Swiss-Prot
Match: DHP1_CAEBR (Dihydropyrimidinase 1 OS=Caenorhabditis briggsae GN=dhp-1 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.232e-47
Identity = 92/185 (49.73%), Postives = 125/185 (67.57%), Query Frame = 1
Query:    4 AAKYVMSPPI-RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEM---RPFNYLFH 546
            AA+YVMSPP+ R     + L   LA G L L GTD+C ++  QK+ G  +F KIPNG+NG+E+RM +VW+  V SG I    YV +TS   A+IFN+YP+KG I VGSDADI+IFNPN++  I+A +HH  LD N++EG +  G  E+TI+ GR+VW N +L  VPGSGK++ +    PF +  H
Sbjct:  289 AARYVMSPPLSRDPTTPELLMKLLAAGELHLTGTDNCTYDGCQKSLGKGNFTKIPNGINGVEDRMSVVWEKGVHSGIIDPMRYVSITSATAAKIFNIYPKKGRIAVGSDADIVIFNPNATRTISAETHHHNLDFNIFEGIKCHGVAEITISRGRIVWANGQLQTVPGSGKFVPLLANSPFVFSSH 473          
BLAST of DY258791 vs. ExPASy Swiss-Prot
Match: DPYS_DICDI (Dihydropyrimidinase OS=Dictyostelium discoideum GN=pyd2 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.528e-47
Identity = 91/188 (48.40%), Postives = 126/188 (67.02%), Query Frame = 1
Query:    4 AAKYVMSPPIRASGHNKA-LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFNYLFHGLDKAD 564
            AA +VM PPIR     K  L   LA G L  VGTD+C F + QKA G DDF KIPNGVNG+E+RM +VW+  V +G+++   +VR TS+E ARIFN+YPRKG I VG D DI+I++PN S  I+  +HH  +D N++EG +V G    TI  G +VW +++L+ V GSG+++   PF  +F G+++ D
Sbjct:  291 AAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWENGVNTGKLTWCQFVRATSSEAARIFNIYPRKGRIDVGCDGDIVIWDPNQSKTISKDTHHHAVDFNIFEGIKVTGIAVTTIVAGNIVWSDNKLSCVKGSGRFVPRPPFGPVFDGIEQRD 478          
BLAST of DY258791 vs. ExPASy Swiss-Prot
Match: DHP1_CAEEL (Dihydropyrimidinase 1 OS=Caenorhabditis elegans GN=dhp-1 PE=1 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 6.112e-46
Identity = 93/185 (50.27%), Postives = 124/185 (67.03%), Query Frame = 1
Query:    4 AAKYVMSPPI-RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEM---RPFNYLFH 546
            AA+YVMSPP+ R     + L   LA G L L GTD+C ++  QK+ G  +F KIPNG+NG+E+RM +VW+  V SG I    YV +TS+  A+IFN+YPRKG I VGSDADI+IFNPN++  I+  +HH  LD N++EG    G  EVTI+ GR+VW + +L  VPGSGK+I +    PF +  H
Sbjct:  289 AARYVMSPPLSRDPTTPELLMKLLAAGELHLTGTDNCTYDCRQKSLGKGNFTKIPNGINGVEDRMSVVWEKGVHSGIIDPMRYVSITSSTAAKIFNIYPRKGRIAVGSDADIVIFNPNATRTISKDTHHHNLDFNIFEGINCHGVAEVTISRGRIVWAHGKLQTVPGSGKFIPLLANSPFVFSTH 473          
BLAST of DY258791 vs. ExPASy Swiss-Prot
Match: DHP2_CAEEL (Dihydropyrimidinase 2 OS=Caenorhabditis elegans GN=dhp-2 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.757e-45
Identity = 90/176 (51.14%), Postives = 119/176 (67.61%), Query Frame = 1
Query:    4 AAKYVMSPPI-RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRP 528
            AA+YVMSPP+ R      AL   LA G L L  TD+C F+  QK+ G DDF KIPNGVNG+E+RM +VWD  V +G I    +V +TST  A+IFN YP+KG I VGSDADI+I+N N++  I+  +HH  +D N++EG +V G  E+TI+ GR VW N +L  V GSG++I + P
Sbjct:  285 AARYVMSPPLSRDPSTPSALMKLLAAGELHLTATDNCTFDCQQKSLGKDDFTKIPNGVNGVEDRMSVVWDKGVHAGIIDPMRFVAVTSTMAAKIFNCYPQKGRIAVGSDADIVIWNANATRTISKDTHHHAIDFNIFEGMQVHGVPEITISRGRTVWANGQLKTVQGSGQFIPLAP 460          
BLAST of DY258791 vs. ExPASy Swiss-Prot
Match: DHP2_CAEBR (Dihydropyrimidinase 2 OS=Caenorhabditis briggsae GN=dhp-2 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.720e-44
Identity = 86/176 (48.86%), Postives = 118/176 (67.05%), Query Frame = 1
Query:    4 AAKYVMSPPI-RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRP 528
            AA+Y+MSPP+ R      AL   LA G L L  TD+C F+  QK+ G DDF KIPNGVNG+E+RM +VWD  V +G I    +V +TST  A+IFN YPRKG I VGSDADI+++N N++  I+  +HH  +D N++EG +V G  E TI  GR+VW + +L  V G+G+++ + P
Sbjct:  285 AARYIMSPPLSRDPSTPNALMKLLAAGELHLTATDNCTFDCHQKSLGKDDFTKIPNGVNGVEDRMSVVWDKGVHAGIIDPMKFVAVTSTMAAKIFNCYPRKGRIAVGSDADIVVWNANATRTISKDTHHHAIDFNIFEGMQVHGVPETTICRGRIVWADGQLRTVQGAGRFVPLPP 460          
BLAST of DY258791 vs. ExPASy Swiss-Prot
Match: HYDA_PSEPU (D-hydantoinase/dihydropyrimidinase OS=Pseudomonas putida GN=dht PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 3.708e-43
Identity = 81/162 (50.00%), Postives = 116/162 (71.60%), Query Frame = 1
Query:    1 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDEL 486
            TAA YVMSPP R   H +AL   L +G L    TDHC F + QKA G DDF +IPNG  GIE+RM ++WD  V SG++S+ ++V LTST  A+IFN++PRKGAI VG+DAD+++++P  +  ++A++HH R+D N++EGR V+G    TI+ G+V+W + +L
Sbjct:  282 TAAGYVMSPPFRPREHQEALWRGLQSGNLHTTATDHCCFCAEQKAMGRDDFSRIPNGTAGIEDRMAVLWDAGVNSGRLSMHEFVALTSTNTAKIFNLFPRKGAIRVGADADLVLWDPQGTRTLSAQTHHQRVDFNIFEGRTVRGVPSHTISQGKVLWADGDL 443          
BLAST of DY258791 vs. ExPASy Swiss-Prot
Match: DPYS_MOUSE (Dihydropyrimidinase OS=Mus musculus GN=Dpys PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 6.324e-43
Identity = 91/202 (45.05%), Postives = 129/202 (63.86%), Query Frame = 1
Query:    4 AAKYVMSPPIRASGHNKA-LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF-NYLFHGLDKADAKYLSSLQAPVKR 603
            AA +VM PP+R        L   LA G L   G+D+C FN+ QKA G DDF KIPNGVNG+E+RM ++W+  V SG++    +V +TST  A+IFN+YP+KG I VGSDADI+I++P ++  I+A++HH  ++ N++EG    G   VTI+ GRVV+E    NV  G GK+I  +PF  Y++  + + D    +    PVKR
Sbjct:  292 AAHHVMGPPLRPDPLTPGFLMDLLANGDLTTTGSDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPKKGRIAVGSDADIVIWDPEATRRISAKTHHQAVNFNIFEGMVCHGVPLVTISRGRVVYEAGVFNVTAGHGKFIPRQPFAEYIYKRIKQRDQ---TCTPVPVKR 490          
BLAST of DY258791 vs. ExPASy Swiss-Prot
Match: DPYS_RAT (Dihydropyrimidinase OS=Rattus norvegicus GN=Dpys PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 9.132e-42
Identity = 89/202 (44.06%), Postives = 129/202 (63.86%), Query Frame = 1
Query:    4 AAKYVMSPPIRASGHNKA-LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF-NYLFHGLDKADAKYLSSLQAPVKR 603
            AA +VM PP+R        L   LA G L   G+D+C FN+ QKA G DDF KIPNGVNG+E+RM ++W+  V SG++    +V +TST  A+IFN+YP+KG I VGSDADI+I++P ++  I+A++HH  ++ N++EG    G   VTI+ GRVV+E    +V  G GK+I  +PF  +++  + + D    +    PVKR
Sbjct:  292 AAHHVMGPPLRPDPSTPGFLMNLLANGDLTTTGSDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPKKGRIAVGSDADIVIWDPEATRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRGRVVYEAGVFDVTAGHGKFIPRQPFAEFIYKRVKQRDQ---TCTPIPVKR 490          
BLAST of DY258791 vs. ExPASy Swiss-Prot
Match: DPYS_HUMAN (Dihydropyrimidinase OS=Homo sapiens GN=DPYS PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.558e-41
Identity = 86/189 (45.50%), Postives = 122/189 (64.55%), Query Frame = 1
Query:    4 AAKYVMSPPIRASGHNKA-LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF-NYLFHGLDKAD 564
            AA +VM PP+R        L   LA   L   GTD+C FN+ QKA G DDF KIPNGVNG+E+RM ++W+  V SG++    +V +TST  A+IFN+YPRKG I VGSDADI+I++P  +  I+A++HH  ++ N++EG    G   VTI+ G+VV+E    +V  G GK+I  +PF  Y++  + + D
Sbjct:  292 AAHHVMGPPLRPDPSTPDFLMNLLANDDLTTTGTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPKGTRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRGKVVYEAGVFSVTAGDGKFIPRKPFAEYIYKRIKQRD 480          
The following BLAST results are available for this feature:
BLAST of DY258791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
HYDA_PSEAE3.241e-4747.85D-hydantoinase/dihydropyrimidinase OS=Pseudomonas ... [more]
DHP1_CAEBR4.232e-4749.73Dihydropyrimidinase 1 OS=Caenorhabditis briggsae G... [more]
DPYS_DICDI5.528e-4748.40Dihydropyrimidinase OS=Dictyostelium discoideum GN... [more]
DHP1_CAEEL6.112e-4650.27Dihydropyrimidinase 1 OS=Caenorhabditis elegans GN... [more]
DHP2_CAEEL6.757e-4551.14Dihydropyrimidinase 2 OS=Caenorhabditis elegans GN... [more]
DHP2_CAEBR5.720e-4448.86Dihydropyrimidinase 2 OS=Caenorhabditis briggsae G... [more]
HYDA_PSEPU3.708e-4350.00D-hydantoinase/dihydropyrimidinase OS=Pseudomonas ... [more]
DPYS_MOUSE6.324e-4345.05Dihydropyrimidinase OS=Mus musculus GN=Dpys PE=2 S... [more]
DPYS_RAT9.132e-4244.06Dihydropyrimidinase OS=Rattus norvegicus GN=Dpys P... [more]
DPYS_HUMAN1.558e-4145.50Dihydropyrimidinase OS=Homo sapiens GN=DPYS PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BH11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258791 ID=DY258791; Name=DY258791; organism=Citrus clementina; type=EST; length=815bp
ACTGCTGCAAAGTATGTCATGAGTCCCCCTATTAGAGCATCAGGACACAA
CAAGGCTCTACAAGCTGCCCTTGCAACTGGGATTTTGCAGCTTGTAGGAA
CTGATCATTGTGCCTTTAATTCTACACAAAAGGCTTTTGGTATTGATGAT
TTCCGGAAGATACCAAATGGTGTGAATGGTATCGAAGAGAGGATGCATTT
GGTCTGGGATACAATGGTGGAATCTGGCCAAATTTCTGTGACTGATTATG
TCAGGTTAACTAGCACTGAATGTGCTAGAATATTCAACGTATATCCCAGG
AAAGGAGCAATTCTTGTTGGATCTGATGCAGATATAATTATATTCAACCC
AAATTCAAGCTTTGAAATTACTGCAAGGTCCCACCACTCTAGATTAGATA
CAAATGTCTATGAGGGCAGGAGAGTAAAAGGGAAGGTTGAAGTGACGATT
GCTGGTGGCAGGGTTGTTTGGGAAAATGATGAACTGAATGTCGTTCCAGG
TTCTGGAAAGTACATAGAAATGCGTCCCTTTAATTATCTTTTTCATGGAC
TTGACAAAGCTGATGCTAAGTATTTATCTTCCCTCCAAGCTCCAGTGAAG
CGTCTTAAGTCCTCGACCTAGATTGCAGGTATTAGCTTCTTTTTTTTTTC
AGTTGTTGGAACTAAATTAGAAGGAAAATCATGCCCAATGTTCAGATTTG
TGTTGAGCTGTGAACTATGACAAATAAATTCAGCTGTTTATCCGCCTGGA
CAAAAGAAACAAACACTGCATCCAATTTGTAAAATATGTATACCTGTTAA
TAAATTTTTTTTACA
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