DY258823

Overview
NameDY258823
Unique NameDY258823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1011
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY258823 vs. ExPASy Swiss-Prot
Match: SYP32_ARATH (Syntaxin-32 OS=Arabidopsis thaliana GN=SYP32 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.034e-14
Identity = 42/64 (65.62%), Postives = 45/64 (70.31%), Query Frame = 2 
Query:   17 SQPLLXXXXXXXXXXXXXMVPLQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIR 208
            S PLL             MVPLQD+YMQ RAEAL  VESTIHEL +IF QLAT+VSQQGEIAIR
Sbjct:  232 SSPLLQQSQQQQQQQQQQMVPLQDTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEIAIR 295
The following BLAST results are available for this feature:
BLAST of DY258823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SYP32_ARATH5.034e-1465.63Syntaxin-32 OS=Arabidopsis thaliana GN=SYP32 PE=2 ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3CE08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258823 ID=DY258823; Name=DY258823; organism=Citrus clementina; type=EST; length=1011bp
GAAGCAGGATGCTTAGAGTCAGCCATTATTGCAGCAGCAACAGCACCATC
AGCAACAACAGCAACAGCAGATGGTTCCATTGCAAGACAGTTACATGCAG
AGCAGAGCTGAAGCTCTTCAGAATGTAGAGTCTACCATCCATGAGCTGGG
CAACATCTTCAACCAGCTTGCGACCCTGGTCTCTCAGCAAGGGGAGATTG
CTATCAGGTATTATTTATTTTCTAGAAATAACTCGGTTGCTCTTTGCCAA
ACAATGCTTTATTCTGATCTTTCACATGCCTTGTAGATTATAGTTTTAAA
TAGTACTTTATATTCTAGGTTTGATATGTACCATGATTATGTATATACAG
CCATTAACAGATTGAATATAAGTTAATTTCCCAACTCGTGACTGAAGTTC
AATTTATTAGTTTAAGATGGCTGAGAAAAGCTTAGGTAAGGCTTCTCACA
CAGATCTGGTAATGCGAATTTAGACATACTCAACTGAGTGTAGAGACAAA
TATAGTTTTTCAAGAATTTTTGTGGAATAAGATGGGTAGCATATTTTTTT
GTGGTTAAAATTTTCACTGACAGCTTTAGGTAGTTGCTGCATAAATTTGA
AATTCATGGGTGCCTCTATTACGTTAATGTGAAATGATATTGTCGACCGG
AGGGCATGATCATTTCCATTAATTGTCTTGTAAGTTTTGAAAAATTTAGT
CAACTCATAACAGTATGTTGAAACATTTTCAACCAATGCTCTCTTGCATC
AACTGAAAGGATTCTACTTTGATGCGAGACAGTTGCTTGCATATATGTTC
TGCATGTGAAACATTTTTGTGAATGAAGAGTGGAATGTATGTTGCAGGGA
TGAAGAAAACATGGATGACCCCATGGCAAATGTAGAGGGGGCACAGGGAA
GCTTTGCTCAAGAACCTCACACAGAAACCGCCAAAAAGGGGGGTAAAGAA
CAAAAAATTCTTTGGATTGATTTTTTTCCTTAAGATTTTCCCTATCCTTG
GGGGCCCAAAC
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