DY258824

Overview
NameDY258824
Unique NameDY258824
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length899
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15543 contig Ccv1_Contig15543:283..1181. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 6.030e-53
Identity = 108/217 (49.77%), Postives = 140/217 (64.52%), Query Frame = 3
Query:   33 QVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDE--EDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 674
            Q+     A + +   D  +++K  F+ FK +KF+ N   Y  LA GQ+PKFMV AC+DSRVCPS++L FQPGEAF+VRNVANMVPP +    S   AA+E+AV  +KV+ I VIGHSRCGGI  LM+  DE      FI  WV V   A+    A  +    D QC  CEKE+VN SL NLLTYP++ + +R   L+L GG+Y+FV+ TFE W LD+
Sbjct:  106 QITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 322          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.343e-52
Identity = 108/217 (49.77%), Postives = 140/217 (64.52%), Query Frame = 3
Query:   33 QVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDE--EDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 674
            Q+     A + +   D  +++K  F+ FK +KF+ N   Y  LA GQ+PKFMV AC+DSRVCPS++L FQPGEAF+VRNVANMVPP +    S   AA+E+AV  +KV+ I VIGHSRCGGI  LM+  DE      FI  WV V   A+    A  +    D QC  CEKE+VN SL NLLTYP++ + +R   L+L GG+Y+FV+ TFE W LD+
Sbjct:  106 QITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 322          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.754e-52
Identity = 108/217 (49.77%), Postives = 140/217 (64.52%), Query Frame = 3
Query:   33 QVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDE--EDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 674
            Q+     A + +   D  +++K  F+ FK +KF+ N   Y  LA GQ+PKFMV AC+DSRVCPS++L FQPGEAF+VRNVANMVPP +    S   AA+E+AV  +KV+ I VIGHSRCGGI  LM+  DE      FI  WV V   A+    A  +    D QC  CEKE+VN SL NLLTYP++ + +R   L+L GG+Y+FV+ TFE W LD+
Sbjct:  105 QITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 321          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 2.291e-52
Identity = 108/217 (49.77%), Postives = 140/217 (64.52%), Query Frame = 3
Query:   33 QVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDE--EDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 674
            Q+     A + +   D  +++K  F+ FK +KF+ N   Y  LA GQ+PKFMV AC+DSRVCPS++L FQPGEAF+VRNVANMVPP +    S   AA+E+AV  +KV+ I VIGHSRCGGI  LM+  DE      FI  WV V   A+    A  +    D QC  CEKE+VN SL NLLTYP++ + +R   L+L GG+Y+FV+ TFE W LD+
Sbjct:  106 QITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELWALDF 322          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 6.666e-52
Identity = 104/215 (48.37%), Postives = 145/215 (67.44%), Query Frame = 3
Query:   42 KLETAAEVENEC-DFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMS--MQDEEDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 674
            +L+ A+  +++  D  +++K  F++FKK+K+  N   Y  LA GQ+PK+MV AC+DSRVCPS++L F PG+AF+VRN+ANMVPP +    +   AA+E+AV  +KVENI+VIGHS CGGI  LMS  +       FI  WV +   A+    A S S +F+ QC  CE+E+VN SL NLLTYP++ E V  G L+L GGYY+FV+ +FE W L +
Sbjct:   37 ELQAASSSDSKSFDPVERIKEGFVTFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWELQF 251          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 5.643e-51
Identity = 103/214 (48.13%), Postives = 137/214 (64.02%), Query Frame = 3
Query:   78 DFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMS--MQDEEDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDYDGSNLKESKEVA 710
            D  + +K  F+ FKK+K+  N   Y  LA GQ+PK+MV AC+DSRVCPS++L FQPG+AF+VRN+ANMVPP +        AA+E+AV  +KVENI+VIGHS CGGI  LMS  +       FI  WV +   A+    +     +F+ QC  CE+E+VN SL NLLTYP++ E +  G L+L GGYY+FV   FE W L++  S     K+VA
Sbjct:  127 DPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEFGLSETSSVKDVA 340          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 7.371e-51
Identity = 102/198 (51.52%), Postives = 135/198 (68.18%), Query Frame = 3
Query:   90 KMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQD--EEDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 674
            ++K  F+ FKK+K+ +N   Y  L+ GQAPKFMV AC+DSRVCPS++L FQPGEAF+VRN+ANMVP  +    +   AA+E+AV  +KVENI+VIGHS CGGI  LMS  D       FI  WV +   A+    A   + +F  QC+HCEKE+VN SL NLLTYP++ + +    L+L GGYY+FV+ +FE W L+Y
Sbjct:  114 RIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELWGLEY 311          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.371e-51
Identity = 103/199 (51.76%), Postives = 135/199 (67.84%), Query Frame = 3
Query:   87 DKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDPS--FIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 674
            +++K  FL FKK+K+ +N   Y  LA GQ+P FMV AC+DSRVCPS++L FQPGEAF+VRNVAN+VPP +    + T AA+E+AV  +KV NI+VIGHS CGGI  L+S   +   S  FI  WV +G  A+   KA      F   C+HCEKE+VN SL NLLTYP++ E +    L+L GGYY+FV  +FE W L++
Sbjct:  122 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEF 320          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.371e-49
Identity = 103/220 (46.82%), Postives = 143/220 (65.00%), Query Frame = 3
Query:   33 QVDKLETAAEVENECDFFDKMKHR---FLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCE-SGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSM--QDEEDPSFIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKWTLDY 674
            +VD++    +  +    FD ++H    F+ FK +K+ +N   Y  L+ GQ+PKFMV AC+DSRVCPS++L FQPGEAF+VRN+ANMVP  + +  S   AA+E+AV  +KVENI+VIGHS CGGI  LMS+     E  +FI  WV +G  A+   +       F  QC+ CEKE+VN SL NLLTYP++ E +    L+L GG+Y+FV+  FE W L++
Sbjct:   94 RVDQITAELQSSDGSKPFDPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELWGLEF 313          
BLAST of DY258824 vs. ExPASy Swiss-Prot
Match: CAHC_HORVU (Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48
Identity = 97/195 (49.74%), Postives = 135/195 (69.23%), Query Frame = 3
Query:   87 DKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPP-CESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDPS--FIRSWVLVGKNARLNTKAASSSLSFDHQCSHCEKESVNCSLLNLLTYPWIEEKVRAGALSLHGGYYNFVDCTFEKW 662
            +++K  F  FK + + +  + ++ L  GQAPK+MV ACADSRVCPS  LG +PGEAF +RN+ANMVP  C++  +   +A+E+AV ++KVE I+VIGHSRCGGI AL+S++D  D S  F+  WV +G  A+   +   +S+ FD QC+  EKE+VN SL NLLTYP+++E V  G L L GG+Y+FV   FE W
Sbjct:  128 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 322          
The following BLAST results are available for this feature:
BLAST of DY258824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CAH1_FLALI6.030e-5349.77Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAHX_FLABR1.343e-5249.77Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAHX_FLAPR1.754e-5249.77Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHX_FLABI2.291e-5249.77Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAH2_ARATH6.666e-5248.37Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAHC_ARATH5.643e-5148.13Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAHC_SPIOL7.371e-5151.52Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAHC_PEA7.371e-5151.76Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]
CAHC_TOBAC2.371e-4946.82Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAHC_HORVU3.424e-4849.74Carbonic anhydrase, chloroplastic OS=Hordeum vulga... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE09FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258824 ID=DY258824; Name=DY258824; organism=Citrus clementina; type=EST; length=899bp
GGAGACATTCTGAGGGAATCACTCAAGAATTTCAAGTTGACAAGCTGGAG
ACTGCAGCAGAAGTTGAAAATGAATGTGATTTTTTTGATAAGATGAAACA
TCGCTTTTTGAGCTTCAAAAAACAGAAATTCATGGAAAATTTAGAGCATT
ACCAAAATCTTGCGGATGGTCAAGCACCAAAGTTTATGGTGATTGCTTGT
GCGGACTCTAGAGTTTGTCCCTCAAACATCCTGGGATTTCAACCAGGAGA
GGCATTTATTGTCCGCAATGTTGCAAATATGGTGCCCCCGTGTGAGAGTG
GGCCCTCAGAAACAAATGCTGCACTGGAATTTGCCGTTAATTCTGTTAAA
GTTGAAAACATTTTAGTCATTGGCCACAGCCGCTGTGGAGGCATTCATGC
CCTTATGAGCATGCAGGATGAAGAAGATCCAAGTTTTATTAGAAGTTGGG
TTCTTGTGGGGAAGAATGCAAGGTTAAACACAAAAGCTGCTTCTTCCAGC
CTTAGCTTTGACCATCAGTGTTCACACTGTGAGAAGGAATCTGTAAATTG
TTCATTGTTAAACCTGCTCACTTATCCATGGATAGAAGAAAAAGTTAGGG
CAGGTGCTCTGTCTCTTCATGGTGGCTACTATAACTTCGTTGACTGCACA
TTTGAGAAATGGACCCTGGATTATGATGGGAGCAATTTGAAGGAAAGTAA
AGAGGTTGCATTTAGAAACCGTTCCTTTTGGAGCTGATTTCCACTTGCAT
CATCTCCATGAAATAAGTTTCTTTTCTTTTTTCTCTTCTATTGTATGTGA
TTTATTTCATAATGTCGGACAAATGAAAAATAATGTTATCCCCTTCCAAG
GGGAATACCTATGCTGTTGTATCTTAATAGCTTAAAAAATTAGTTTGTC
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