DY258826

Overview
NameDY258826
Unique NameDY258826
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1215
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1258 contig Ccv1_Contig1258:1..1215. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AAT5_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2)

HSP 1 Score: 397.512 bits (1020), Expect = 6.884e-111
Identity = 204/255 (80.00%), Postives = 221/255 (86.67%), Query Frame = 1
Query:   16 MASTMLSIASATPSASLSMHEKLKGKVKLGSTTNSTAGFIKTKSFGRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            MAS MLS+ S     SL   E  K K+KLG  T+++  F+K KSF RV+M  AV  SRFEG+TMAPPDPILGVSEAFKADT+  KLNLGVGAYRTEELQPYVL+VVKKAENLMLERG+NKEYLPIEGLAAFNK TAELLFGA + V+KEQRVAT+QGLSGTGSLRLAAALIERYFPGAKV+ISSPTWGNHKNIFNDA+VPWSEYRYYDPKT GLD EGMIADIK AP GSFILLHG AHNPTGIDPTPE+W KIA
Sbjct:    1 MASLMLSLGST----SLLPREINKDKLKLG--TSASNPFLKAKSFSRVTMTVAVKPSRFEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFPGAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILLHGCAHNPTGIDPTPEQWVKIA 249          

HSP 2 Score: 26.1794 bits (56), Expect = 6.884e-111
Identity = 11/24 (45.83%), Postives = 14/24 (58.33%), Query Frame = 2
Query:  773 KLLEAIQKKNHIPIFRCCPPGMIS 844
            K+ + IQ+KNHIP F     G  S
Sbjct:  247 KIADVIQEKNHIPFFDVAYQGFAS 270          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATM_LUPAN (Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 6.944e-108
Identity = 198/254 (77.95%), Postives = 215/254 (84.65%), Query Frame = 1
Query:   22 STMLSIASATPSASLSMHEKLK-GKVKLGSTTNSTAGFIKTKSFGRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            S++LSI    PS SL  ++KLK G   L  +   +  F   KS  R+SMVAAVNVSRFEG+ MAPPDPILGVSEAF+ADT + KLNLGVGAYRTEELQPYVL VV KAENLMLERG+NKEYL IEGLAAFNK TAELL GADN  +K+QRVATVQGLSGTGSLRL AALIERYFPGAKVLIS+PTWGNHKNIFNDARVPWSEYRYYDPKT GLD EGMI DIKAAP G+F+LLHG AHNPTGIDPTPE+WEKIA
Sbjct:    1 SSLLSI----PSLSLQYNDKLKVGGNSLRFSKEQSNTFSNAKSSCRISMVAAVNVSRFEGIPMAPPDPILGVSEAFRADTSDAKLNLGVGAYRTEELQPYVLKVVNKAENLMLERGQNKEYLAIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFPGAKVLISAPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKAAPEGTFVLLHGCAHNPTGIDPTPEQWEKIA 250          

HSP 2 Score: 26.5646 bits (57), Expect = 6.944e-108
Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = 2
Query:  770 KKLLEAIQKKNHIPIFRCCPPGMIS 844
            +K+ + IQ+KNHIP F     G  S
Sbjct:  247 EKIADVIQEKNHIPFFDVAYQGFAS 271          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATM_BOVIN (Aspartate aminotransferase, mitochondrial OS=Bos taurus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 9.605e-58
Identity = 115/225 (51.11%), Postives = 147/225 (65.33%), Query Frame = 1
Query:  151 GRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPM 822
            G  +  +A   S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G +N VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  PTWGNH  IF DA +    YRYYDPKT G D  G I DI   P  S ILLH  AHNPTG+DP PE+W+++A    K   ++ F M
Sbjct:   20 GLAAAASARASSWWAHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIAGLAEFCKASAELALGENNEVLKSGRYVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQSYRYYDPKTCGFDFTGAIEDISKIPAQSVILLHACAHNPTGVDPRPEQWKEMATVVKKNNLFAFFDM 244          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_DAUCA (Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 2.795e-57
Identity = 112/199 (56.28%), Postives = 143/199 (71.86%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKI 777
            S F  V  AP DPILGV+ A+  D    KLNLGVGAYRTEE +P VL+VVKKAE +++ ++   KEYLPI GLA FNK++A+L+FGAD+  ++E RVATVQ LSGTGSLR+    + R++    V I  PTWGNH  IF  A +    YRYY+P+T GLD EGM+ D+ +AP G+ +LLH  AHNPTG+DPT E+WE+I
Sbjct:    3 SVFANVVRAPEDPILGVTVAYHKDQSPNKLNLGVGAYRTEEGKPLVLNVVKKAEQMLVNDQSRVKEYLPIVGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHYHEHTVYIPQPTWGNHPKIFTLAGLSVKTYRYYNPETRGLDFEGMLEDLGSAPLGAIVLLHACAHNPTGVDPTIEQWEQI 201          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATM_DICDI (Aspartate aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=aatA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 4.767e-57
Identity = 111/221 (50.23%), Postives = 145/221 (65.61%), Query Frame = 1
Query:  121 TAGFIKTKSFGRVSMVA-AVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA 780
            +A  I    FG+ ++   + N + +  V   P DPILGVS A+  DT   K+NLGVGAYR E  +PYVLD VKKA+  + E   + EY PI G+AAFN++ A+L  G +   +KE+R+ATVQ +SGTG+LR+AA    R+  G    + +PTWGNH  IFNDA +P   Y YY+P T GL+ E M  DI AAP GS ILLH  AHNPTG+DPT E+W+KI+
Sbjct:    4 SARLISNIKFGQKNIRQFSTNTNWWANVQKGPEDPILGVSIAYNKDTSPSKINLGVGAYRDENGKPYVLDCVKKADKKIYEANVDHEYAPIVGVAAFNQLAAQLALGEECKHIKEKRIATVQSISGTGALRIAADFFARFLKGKTAYVPNPTWGNHNVIFNDAGIPVKSYGYYNPATCGLNFEAMTKDIAAAPEGSIILLHACAHNPTGVDPTAEQWKKIS 224          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATM_MOUSE (Aspartate aminotransferase, mitochondrial OS=Mus musculus GN=Got2 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.062e-56
Identity = 113/225 (50.22%), Postives = 148/225 (65.78%), Query Frame = 1
Query:  151 GRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPM 822
            G  +  +A   S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G +N VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT G D  G + DI   P  S +LLH  AHNPTG+DP PE+W++IA    K+  ++ F M
Sbjct:   20 GLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIASVVKKKNLFAFFDM 244          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATM_HUMAN (Aspartate aminotransferase, mitochondrial OS=Homo sapiens GN=GOT2 PE=1 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 1.387e-56
Identity = 113/225 (50.22%), Postives = 147/225 (65.33%), Query Frame = 1
Query:  151 GRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPM 822
            G  +  +A   S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G ++ VLK  R  TVQ +SGTG+LR+ A+ ++R+F  ++ V +  PTWGNH  IF DA +    YRYYDPKT G D  G + DI   P  S +LLH  AHNPTG+DP PE+W++IA    K   ++ F M
Sbjct:   20 GLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFDM 244          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATM_PIG (Aspartate aminotransferase, mitochondrial OS=Sus scrofa GN=GOT2 PE=1 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 2.366e-56
Identity = 113/225 (50.22%), Postives = 146/225 (64.89%), Query Frame = 1
Query:  151 GRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK-VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKIA*GHPKEKSYSHFPM 822
            G  +  +A   S +  V M PPDPILGV+EAFK DT+ KK+NLGVGAYR +  +PYVL  V+KAE  +  +  +KEYLPI GLA F K +AEL  G +N VLK  R  TVQ +SGTG+LR+ A  ++R+F  ++ V +  P+WGNH  IF DA +    YRYYDPKT G D  G + DI   P  S ILLH  AHNPTG+DP PE+W+++A    K   ++ F M
Sbjct:   20 GLAAAASARASSWWAHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENNEVLKSGRYVTVQTISGTGALRIGANFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLHSYRYYDPKTCGFDFTGALEDISKIPAQSVILLHACAHNPTGVDPRPEQWKEMATLVKKNNLFAFFDM 244          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AATC_ORYSJ (Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 3.090e-56
Identity = 105/199 (52.76%), Postives = 141/199 (70.85%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKI 777
            S F G+  AP DPILGV+ A+  D    K+NLGVGAYRTEE +P VL+VV++AE +++      KEYLPI GLA FNK++A+L+FGAD+  ++E RVATVQ LSGTGSLR+    + R++    + I  PTWGNH  +F  A +    YRYYDP T GLD +G++ D+ +AP G+ +LLH  AHNPTG+DPT ++WE+I
Sbjct:    5 SVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQMLINNPSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHYHERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAIVLLHACAHNPTGVDPTLDQWEQI 203          
BLAST of DY258826 vs. ExPASy Swiss-Prot
Match: AAT1_MEDSA (Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 3.090e-56
Identity = 106/199 (53.27%), Postives = 141/199 (70.85%), Query Frame = 1
Query:  184 SRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTAGLDLEGMIADIKAAPGGSFILLHGWAHNPTGIDPTPEKWEKI 777
            S F  +  AP DPILGV+ A+  D    KLNLGVGAYRTEE +P VLDVV++ E  +L +   NKEY+PI GLA FNK++A+L+FGAD+  ++E RV TVQGLSGTGSLR+    + +++    + + +PTWGNH  +FN A +    YRYY P T GLD +G++ D+ +AP GS +LLH  AHNPTG+DPT E+WE+I
Sbjct:   16 SVFAHLVRAPEDPILGVTVAYNKDPSPIKLNLGVGAYRTEEGKPLVLDVVRRVERQLLNDMSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQGLSGTGSLRVGGEFLAKHYHQRIIYLPTPTWGNHTKVFNLAGLTVKTYRYYAPATRGLDFQGLLEDLGSAPSGSVVLLHACAHNPTGVDPTLEQWEQI 214          
The following BLAST results are available for this feature:
BLAST of DY258826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
AAT5_ARATH6.884e-11180.00Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_LUPAN6.944e-10877.95Aspartate aminotransferase P2, mitochondrial (Frag... [more]
AATM_BOVIN9.605e-5851.11Aspartate aminotransferase, mitochondrial OS=Bos t... [more]
AATC_DAUCA2.795e-5756.28Aspartate aminotransferase, cytoplasmic OS=Daucus ... [more]
AATM_DICDI4.767e-5750.23Aspartate aminotransferase, mitochondrial OS=Dicty... [more]
AATM_MOUSE1.062e-5650.22Aspartate aminotransferase, mitochondrial OS=Mus m... [more]
AATM_HUMAN1.387e-5650.22Aspartate aminotransferase, mitochondrial OS=Homo ... [more]
AATM_PIG2.366e-5650.22Aspartate aminotransferase, mitochondrial OS=Sus s... [more]
AATC_ORYSJ3.090e-5652.76Aspartate aminotransferase, cytoplasmic OS=Oryza s... [more]
AAT1_MEDSA3.090e-5653.27Aspartate aminotransferase 1 OS=Medicago sativa GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258826 ID=DY258826; Name=DY258826; organism=Citrus clementina; type=EST; length=1215bp
CGTAAAATCACATTTATGGCCTCAACAATGCTTTCAATAGCTTCTGCAAC
TCCTTCAGCTTCGCTATCGATGCACGAGAAGCTCAAGGGCAAGGTTAAGC
TTGGAAGTACCACTAATTCGACAGCAGGATTCATTAAGACTAAATCCTTT
GGTCGAGTATCTATGGTTGCTGCTGTCAATGTTTCTCGTTTTGAGGGTGT
AACGATGGCTCCCCCCGATCCAATTCTTGGAGTTTCTGAAGCTTTTAAAG
CTGACACAGATGAAAAGAAACTCAACCTTGGAGTCGGTGCTTATCGAACC
GAAGAGCTACAGCCTTATGTGCTTGATGTTGTTAAGAAGGCAGAGAATCT
TATGCTGGAAAGGGGGGAAAACAAGGAGTATCTTCCAATTGAAGGTTTGG
CTGCATTCAATAAGGTGACAGCAGAGTTATTGTTTGGAGCTGACAACTCA
GTGCTAAAGGAACAAAGAGTTGCAACAGTTCAAGGTCTTTCAGGAACCGG
TTCTCTTCGGCTGGCTGCAGCTCTTATAGAACGATATTTTCCTGGGGCAA
AAGTACTAATATCATCTCCAACATGGGGTAACCACAAGAACATTTTCAAT
GATGCTAGAGTTCCATGGTCTGAATACCGCTACTATGATCCAAAAACAGC
GGGTTTGGATTTAGAGGGAATGATAGCAGACATAAAGGCAGCCCCTGGAG
GATCTTTTATTCTGCTTCATGGTTGGGCTCACAACCCAACTGGCATTGAT
CCAACCCCTGAAAAATGGGAAAAAATTGCTTGAGGCCATCCAAAAGAAAA
ATCATATTCCCATTTTCCGATGTTGCCCACCAGGTATGATTTCCTGGAAA
TCAAGAAAAAAAAATGAGGCCCACAAAGTCCTTCCCAACCCGGCCCCAAA
AGGAAGTTTAAAAAAATTTCAAAATTTCTTCCCGGAAAATTCAACTCTTT
GGAGGGCCCCCCCCCCAAAAAAAAAAAAAACCTTTTGAAGGAACCCTCGG
GAAATTTGACAGGGGGAACACCCCTGGACAAAGGAAGCATCCCCCCCCGG
GAAAAAGGGTTTGCCCCCCCCCGGGGCCAAGGGAACATCCCCGGGGGTCG
CCCACCCCCACCCACCAAAAAAAACCCTTGGGTCCCTCTTAATCGCAAAA
AAAGGAATGGGGAAGACAACAAAAAATGGGGGGGGCTGCTTGGTCTTCTC
CACATAAACCCAAAA
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