DY258827

Overview
NameDY258827
Unique NameDY258827
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1063
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12949 contig Ccv1_Contig12949:690..1753. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPB_XENTR (Mannose-1-phosphate guanyltransferase beta OS=Xenopus tropicalis GN=gmppb PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 9.044e-78
Identity = 133/223 (59.64%), Postives = 177/223 (79.37%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            V+EPSKYGVVV E  +G++++FVEKP++FV NKIN+G+Y+ +PAVLDRI+LRPTSIEKE+FP +A EG+LFAM L GFWMDIGQP+D++TG+ +YL S+R+K    L  G   +GNVLV  +A+IG+ C IGP+V +GPG  VE GVR+ RCT+M+G R+  H+ + SSI+GW S+VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  138 VEEPSKYGVVVYEAESGQIQRFVEKPQVFVSNKINSGLYIFSPAVLDRIQLRPTSIEKEIFPAMAQEGQLFAMELQGFWMDIGQPKDFLTGMCMYLQSVRQKHPEWLHVGPGFIGNVLVDPTAKIGQNCSIGPNVTIGPGVTVEDGVRIKRCTIMKGSRLHSHSWLESSIVGWSSSVGQWVRMENVTVLGEDVIVNDELYLNGANVLPHKCISESVPEPRIIM 360          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPB_HUMAN (Mannose-1-phosphate guanyltransferase beta OS=Homo sapiens GN=GMPPB PE=1 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 9.044e-78
Identity = 137/223 (61.43%), Postives = 177/223 (79.37%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            V+EPSKYGVVV E  TG++ +FVEKP++FV NKINAG+Y+L+PAVL RI+L+PTSIEKEVFP +A EG+L+AM L GFWMDIGQP+D++TG+ L+L SLR+K   +L +G  IVGNVLV  SA+IG+ C IGP+V++GPG VVE GV + RCTV+R  RI+ H+ + S I+GW   VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  138 VEEPSKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLQRIQLQPTSIEKEVFPIMAKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKQPERLCSGPGIVGNVLVDPSARIGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDARIRSHSWLESCIVGWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM 360          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPBA_XENLA (Mannose-1-phosphate guanyltransferase beta-A OS=Xenopus laevis GN=gmppb-A PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.543e-77
Identity = 133/223 (59.64%), Postives = 177/223 (79.37%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            V+EPSKYGVVV E  +G++++FVEKP++FV NKIN+G+Y+ +PAVLDRI+LRPTSIEKE+FP +A EG+L+AM L GFWMDIGQP+D++TG+ +YL S+R+K    L  G   +GNVLV  +A+IG+ C IGP+V +GPG  VE GVR+ RCTVM+G R+  H+ + SSI+GW S+VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  138 VEEPSKYGVVVYETESGQIQRFVEKPQVFVSNKINSGLYIFSPAVLDRIQLRPTSIEKEIFPAMAQEGQLYAMELQGFWMDIGQPKDFLTGMCMYLQSVRQKHPEWLHAGPGFIGNVLVDPTAKIGQNCSIGPNVTIGPGVTVEDGVRIKRCTVMKGSRLHSHSWLESSIVGWSSSVGQWVRMENVTVLGEDVIVNDELYLNGANVLPHKCISESVPEPRIIM 360          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPB_MOUSE (Mannose-1-phosphate guanyltransferase beta OS=Mus musculus GN=Gmppb PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 5.862e-77
Identity = 135/223 (60.54%), Postives = 176/223 (78.92%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            V+EPSKYGVVV E  TG++ +FVEKP++FV NKINAG+Y+L+PAVL RI+L+PTSIEKE+FP +A EG+L+AM L GFWMDIGQP+D++TG+ L+L SLR+K   +L +G  IVGNVLV  SA+IG+ C IGP+V++GPG VVE GV + RCTV+R   I+ H+ + S I+GW   VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  138 VEEPSKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLQRIQLKPTSIEKEIFPVMAKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKHPERLYSGPGIVGNVLVDPSARIGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM 360          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPBB_XENLA (Mannose-1-phosphate guanyltransferase beta-B OS=Xenopus laevis GN=gmppb-B PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 7.656e-77
Identity = 130/223 (58.30%), Postives = 176/223 (78.92%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            V+EPSKYGVV+ E  +G++++FVEKP++FV NKIN+G+Y+ +PAVLDRI+LRPTSIEKE+FP +A EG+LFA+ L GFWMDIGQP+D++TG+ +YL S+R K   +L  G    GNVLV  +A+IG+ C IGP+V +GPG  VE GVR+ RC++M+G R+  H+ + SSI+GW S+VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  138 VEEPSKYGVVIYEAESGRIQRFVEKPQVFVSNKINSGLYIFSPAVLDRIQLRPTSIEKEIFPVMAQEGQLFALELQGFWMDIGQPKDFLTGMCMYLQSVRHKHPERLHVGPGFTGNVLVDPTAKIGQNCSIGPNVTIGPGVTVEDGVRIKRCSIMKGSRLHSHSWLQSSIVGWSSSVGQWVRMENVTVLGEDVIVNDELYLNGANVLPHKCISESVPEPRIIM 360          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPB_BOVIN (Mannose-1-phosphate guanyltransferase beta OS=Bos taurus GN=GMPPB PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 2.228e-76
Identity = 135/223 (60.54%), Postives = 175/223 (78.48%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            V+EPSKYGVVV E  TG+V +FVEKP++FV NKINAG+Y+L+P+VL RI+L+PTSIEKE+FP +A EG+L+AM L GFWMDIGQP+D++TG+ L+L SLR+K   +L +G  IVGNVLV   A+IGE C IGP+V++GPG VVE GV + RCTV+R   I+ H+ + S I+GW   VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  138 VEEPSKYGVVVCEADTGRVHRFVEKPQVFVSNKINAGVYILSPSVLRRIQLQPTSIEKEIFPVMAKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLKSLRQKHPEQLCSGPGIVGNVLVDPRARIGENCSIGPNVSLGPGVVVEDGVCIRRCTVLRDAHIRSHSWLESCIVGWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM 360          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPB_PIG (Mannose-1-phosphate guanyltransferase beta OS=Sus scrofa GN=GMPPB PE=1 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.909e-76
Identity = 135/223 (60.54%), Postives = 176/223 (78.92%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            V+EPSKYGVVV E  TG++ +FVEKP++FV NKINAG+Y+L+PAVL RI+L+PTSIEKE+FP +A EG+L+AM L GFWMDIGQP+D++TG+ L+L SLR+K   +L +G  IVGNVLV  SA+IG+ C IGP+V++GPG VVE GV + RCTV+R  RI+ H+ + S I+ W   VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  138 VEEPSKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLQRIQLQPTSIEKEIFPVMAKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKQPEQLCSGPGIVGNVLVDPSARIGKNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDARIRSHSWLESCIVCWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPGIIM 360          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPB_DICDI (Mannose-1-phosphate guanyltransferase beta OS=Dictyostelium discoideum GN=gmppB PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.465e-76
Identity = 128/223 (57.40%), Postives = 175/223 (78.48%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            V+EPSKYGVVV +E  G++ KFVEKP+++VGNKINAG+Y+ NP +LDRI+ +PTSIEKE+FP +A + +L+ M L GFWMD+GQP+D+++G+ LYL+SL+ K    LATG  I+G VL+  S+ I  GCLIGP+V +GP CV++ G RL   TV+ G  I K++ I S+IIGW+S++G+W R+EN ++LGEDVHV DE+Y NGG +LPHK I SSI +PEI+M
Sbjct:  137 VEEPSKYGVVVYKEENGQILKFVEKPQVYVGNKINAGVYIFNPTILDRIQPKPTSIEKEIFPAMAADSQLYCMQLEGFWMDVGQPKDFLSGMGLYLNSLKSKQPELLATGNGIIGPVLIDPSSVIEPGCLIGPNVTIGPNCVIQEGTRLVNTTVLEGTTIGKNSWIKSTIIGWNSSIGKWVRMENTSVLGEDVHVSDELYINGGKILPHKSITSSIPEPEIIM 359          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPB_DROME (Mannose-1-phosphate guanyltransferase beta OS=Drosophila melanogaster GN=CG1129 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 3.217e-75
Identity = 131/223 (58.74%), Postives = 178/223 (79.82%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            V+EPSKYGVV+ +E+ G ++ F+EKP+ FV NKINAGIY+ NP+VLDRIE++PTSIEKEVFP++  + +L+AM L GFWMDIGQP+D++TG+ LYL SLR+K S KL TG  +VGNVLV  +A+IGEGC IGP+V +GP  V+E GV + R T+++G  ++ H+ + S I+GW STVG+W R+E +T+LGEDV V DE+Y NGG VLPHK I +S+ +P+I+M
Sbjct:  148 VEEPSKYGVVLYDEN-GCIKNFIEKPQEFVSNKINAGIYIFNPSVLDRIEVKPTSIEKEVFPEMTQQQELYAMDLTGFWMDIGQPKDFLTGMCLYLSSLRQKQSPKLYTGPGVVGNVLVDPTAKIGEGCRIGPNVTIGPDVVIEDGVCIKRSTILKGAIVRSHSWLDSCIVGWRSTVGRWVRIEGITVLGEDVIVKDELYINGGQVLPHKSIAASVPEPQIIM 369          
BLAST of DY258827 vs. ExPASy Swiss-Prot
Match: GMPPB_DANRE (Mannose-1-phosphate guanyltransferase beta OS=Danio rerio GN=gmppb PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 1.222e-74
Identity = 127/223 (56.95%), Postives = 175/223 (78.48%), Query Frame = 1
Query:   16 VDEPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSFKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 684
            V+EPSKYGVVV E  +G++ +FVEKP++FV NKINAG+Y+ +PA+L RI+LRPTSIEKE+FP +A EG+L+AM L GFWMDIGQP+D++TG+ +YL S+R+++  +L  G   +GNVLV  +A IG+ C IGP+V +G G V+E GVR+ RCT+++G  I+ H+ + S I+GW S+VGQW R+EN+T+LGEDV V DE+Y NG  VLPHK I  S+ +P I+M
Sbjct:  138 VEEPSKYGVVVYEGDSGRIHRFVEKPQVFVSNKINAGMYIFSPAMLRRIQLRPTSIEKEIFPVMAEEGQLYAMELQGFWMDIGQPKDFLTGMCMYLQSVRQQAPERLRAGPGFLGNVLVDPTAVIGQNCTIGPNVTIGAGVVLEDGVRVKRCTILKGAHIRSHSWLESCIVGWSSSVGQWVRMENVTVLGEDVIVNDELYINGANVLPHKSITDSVPEPRIIM 360          
The following BLAST results are available for this feature:
BLAST of DY258827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
GMPPB_XENTR9.044e-7859.64Mannose-1-phosphate guanyltransferase beta OS=Xeno... [more]
GMPPB_HUMAN9.044e-7861.43Mannose-1-phosphate guanyltransferase beta OS=Homo... [more]
GMPBA_XENLA1.543e-7759.64Mannose-1-phosphate guanyltransferase beta-A OS=Xe... [more]
GMPPB_MOUSE5.862e-7760.54Mannose-1-phosphate guanyltransferase beta OS=Mus ... [more]
GMPBB_XENLA7.656e-7758.30Mannose-1-phosphate guanyltransferase beta-B OS=Xe... [more]
GMPPB_BOVIN2.228e-7660.54Mannose-1-phosphate guanyltransferase beta OS=Bos ... [more]
GMPPB_PIG2.909e-7660.54Mannose-1-phosphate guanyltransferase beta OS=Sus ... [more]
GMPPB_DICDI8.465e-7657.40Mannose-1-phosphate guanyltransferase beta OS=Dict... [more]
GMPPB_DROME3.217e-7558.74Mannose-1-phosphate guanyltransferase beta OS=Dros... [more]
GMPPB_DANRE1.222e-7456.95Mannose-1-phosphate guanyltransferase beta OS=Dani... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258827 ID=DY258827; Name=DY258827; organism=Citrus clementina; type=EST; length=1063bp
CACTTATCTTGTATTGTGGATGAGCCATCAAAATATGGTGTGGTGGTTAT
GGAAGAGTCTACTGGAAAAGTTGAGAAATTCGTAGAGAAACCTAAATTAT
TTGTTGGTAACAAAATTAATGCTGGAATTTATCTTTTGAACCCTGCGGTT
CTTGATCGCATTGAGCTGAGGCCCACCTCCATTGAGAAAGAGGTCTTTCC
AAAAATTGCTTTAGAGGGAAAGCTCTTCGCGATGGTTCTTCCAGGTTTCT
GGATGGACATTGGACAGCCGAGGGATTACATTACAGGCTTGAGACTCTAT
CTGGACTCCCTGAGGAAGAAGTCCTCATTCAAGTTGGCCACTGGTGCTAA
CATTGTAGGCAATGTCTTGGTGCATGAGAGTGCTCAAATTGGGGAGGGAT
GTTTGATTGGACCCGATGTTGCCGTTGGCCCGGGTTGTGTTGTTGAGTCA
GGAGTTAGACTCTCTCGCTGCACAGTGATGCGTGGAGTGCGCATCAAGAA
ACATGCTTGCATATCCAGCAGTATCATTGGATGGCACTCCACTGTTGGGC
AATGGGCTCGCGTAGAGAACATGACCATTCTCGGGGAAGACGTTCATGTC
TGCGATGAAATTTATAGCAATGGGGGTGTGGTTTTGCCGCACAAAGAGAT
AAAATCAAGCATTTTGAAGCCAGAGATAGTCATGTGAGCCACTGATCAGA
TTGCAAGTAGAGAATGTGGTCGGAGAGTAGCAAGTTATCCAGTCATTGTG
CCCGGTAATGTGTTCTTTATCCTTTCTTCATCTTCTTTACATTGTAAAAC
TGTGTGTGTTTTAGTCTTTTGAGTCGTGTGAATTCTAAAGTTGAAGGCTT
TTTTAGTTTCTCTTGTAAAATGCTCAAAATTATCATTGGGTGTGGGAAAT
GGAAATTGTAACTTTTAGTGTAAATAAAGATTTGGCAAAAAACCATCGGG
GTGGGTTTCCGGGGCCAGTAATTGGTCATGATGTCCCGAAAAAATGGCTT
TTATTTTTTGAAATATAAAAAATTTTTTTTTTCCCACTTTTACCAAATTT
CAATTGGCCCGGG
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