DY258868

Overview
NameDY258868
Unique NameDY258868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1140
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: ILL3_ARATH (IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsis thaliana GN=ILL3 PE=2 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 2.360e-95
Identity = 172/230 (74.78%), Postives = 197/230 (85.65%), Query Frame = 1
Query:   82 DEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            D+   NQ +  A  DK+WLVSVRRQIHENPELLFE H TSALIRRELD+LG+ Y+YPVAKTGIVAQIGSG  PVVALRADMDALPLQELVEW+HKSKIDGKMHACGHD HTTMLLGAAKLL +RK  L GTVR+LFQPAEEGGAGAFHMIKEGALGDSEAIFGMH+  G+PTG +A+ISGP LA+TS+F+V++ G+   ++  +S +DP+L ASS ILALQ +ISRE DP
Sbjct:   23 DQEYPNQYLTEALGDKEWLVSVRRQIHENPELLFELHKTSALIRRELDELGVSYSYPVAKTGIVAQIGSGYPPVVALRADMDALPLQELVEWDHKSKIDGKMHACGHDSHTTMLLGAAKLLSKRKRMLNGTVRLLFQPAEEGGAGAFHMIKEGALGDSEAIFGMHVHTGLPTGELATISGPALASTSIFSVRMSGKSPASSETYSCVDPVLAASSTILALQLIISREVDP 252          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: ILL5_ORYSJ (IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sativa subsp. japonica GN=ILL5 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 6.897e-79
Identity = 144/219 (65.75%), Postives = 178/219 (81.28%), Query Frame = 1
Query:  115 AQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            A++++DW+V VRR+IH +PEL F EH+TSAL+R EL++LG+  A  VA TG+VA +GSG  PVVALRADMDALP+QELVEWEHKSK+DG MHACGHDVHT MLLGAAKLL +RK++++GTVR+LFQPAEEGGAGA +MIK+G L   EAIFGMH+D  +PTG IA+ +GP  AA   +  K+EG+ G A  PH  +DPI+ AS VIL+LQQLISRE DP
Sbjct:   30 AEEERDWMVGVRRRIHAHPELAFREHHTSALVRDELERLGLT-ARAVAGTGVVADVGSGLPPVVALRADMDALPVQELVEWEHKSKVDGVMHACGHDVHTAMLLGAAKLLSERKEQIKGTVRLLFQPAEEGGAGASYMIKDGVLDGVEAIFGMHVDYRMPTGVIAAHAGPTQAAVCFYEAKIEGKTGKAETPHLNVDPIVAASFVILSLQQLISREDDP 247          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSJ (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 4.626e-75
Identity = 132/213 (61.97%), Postives = 168/213 (78.87%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            W+V +RR+IHENPEL +EE  TS L+RRELD LGIPY +P A TG+VA +G+G  P VALRADMDALP+QE VEWEHKSK+ GKMH CGHD H  MLLG+A++L + +D+L+GTV ++FQPAEEGG GA  MI +GA+ + EAIFG+H+   +P G +AS  GP +A +  F   + G+GGHAA+PH TIDPIL AS+VI++LQQL+SREADP
Sbjct:   48 WMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKGTVVLVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADP 260          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 1.346e-74
Identity = 131/213 (61.50%), Postives = 167/213 (78.40%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            W+V +RR+IHENPEL +EE  TS L+RRELD LGIPY +P A TG+VA +G+G  P VALRADMDALP+QE VEWEHKSK+ GKMH CGHD H  MLLG+A++L + +D+L+GTV ++FQPAEEGG GA  MI +G + + EAIFG+H+   +P G +AS  GP +A +  F   + G+GGHAA+PH TIDPIL AS+VI++LQQL+SREADP
Sbjct:   48 WMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKGTVVLVFQPAEEGGGGAKKMIDDGTVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADP 260          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: ILL9_ORYSJ (IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sativa subsp. japonica GN=ILL9 PE=2 SV=2)

HSP 1 Score: 279.641 bits (714), Expect = 2.296e-74
Identity = 130/217 (59.91%), Postives = 170/217 (78.34%), Query Frame = 1
Query:  130 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI---GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            +WL  VRR+IH +PEL FEE  TS L+R ELD +G+PY +PVA+TG+VA I   G G  PVVALRADMDALP+QELV+WEHKS+ +GKMHACGHD HT MLLGAAKLL +RK++L+GTV+++FQPAEEG AGA+++++EG L D  A+FGMH+D  +P G +A+  GP  A +  F   + G+GGHAA PH  IDP++ AS+ IL+LQQ+++RE DP
Sbjct:   50 EWLRGVRRRIHRHPELAFEEVRTSELVRAELDAIGVPYQWPVARTGVVATIAGGGGGDGPVVALRADMDALPVQELVDWEHKSQENGKMHACGHDAHTAMLLGAAKLLQKRKNELKGTVKLVFQPAEEGSAGAYYVLQEGVLDDVSAMFGMHVDPALPVGVVAARPGPFAATSGRFLATITGKGGHAAFPHDAIDPVVAASNAILSLQQIVAREIDP 266          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: ILL4_ARATH (IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2)

HSP 1 Score: 278.485 bits (711), Expect = 5.115e-74
Identity = 129/214 (60.28%), Postives = 167/214 (78.04%), Query Frame = 1
Query:  130 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            DW+V +RR+IHENPEL +EE  TS L+R EL+K+G+ Y YPVA TG+V  +G+G  P VALRADMDAL +QE+VEWEHKSK+ GKMHACGHD HTTMLLGAAKLL + +++L+GTV ++FQPAEEGG GA  +++ G L +  AIFG+H+   +  G ++S  GP LA +  F  K+ G+GGHAA+P  TIDPIL AS+VI++LQ L+SREADP
Sbjct:   46 DWMVGIRRRIHENPELGYEEVETSKLVRAELEKMGVSYKYPVAVTGVVGYVGTGHAPFVALRADMDALAMQEMVEWEHKSKVPGKMHACGHDAHTTMLLGAAKLLKEHEEELQGTVVLVFQPAEEGGGGAKKIVEAGVLENVSAIFGLHVTNQLALGQVSSREGPMLAGSGFFKAKISGKGGHAALPQHTIDPILAASNVIVSLQHLVSREADP 259          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 276.944 bits (707), Expect = 1.488e-73
Identity = 134/214 (62.62%), Postives = 165/214 (77.10%), Query Frame = 1
Query:  130 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            DW+V +RR+IHENPEL +EE  TS LIR EL+ +GI Y YPVA TG++  IG+G  P VALRADMDALP+QE VEWEHKSKI GKMHACGHD H TMLLGAAK+LH+ +  L+GTV ++FQPAEEG +GA  M +EGAL + EAIFG+H+   IP G  AS +G  LA   VF   + G+GGHAA+P  TIDP++ ASS++L+LQQL+SRE DP
Sbjct:   49 DWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDP 262          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: ILL7_ORYSJ (IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica GN=ILL7 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 5.655e-73
Identity = 133/217 (61.29%), Postives = 168/217 (77.42%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI----GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            WL  +RR IH +PEL FEE  TS L+R ELD +G+PY +PVA+TG+VA I    G+G+  V ALRADMDALPLQELV+WEHKS+  GKMHACGHD HTTMLLGAAKLL  +KD L+GTV+++FQPAEEG AGA ++++EG L D  AIFG+H+D  I  G++ S  GP LAA+  F   + G+GGHAA PH+ +DPILTASS I++LQQ+++RE DP
Sbjct:   65 WLRGLRRSIHRHPELAFEEVRTSELVRAELDAIGVPYEWPVARTGVVATIAGGDGAGAGTVFALRADMDALPLQELVDWEHKSEESGKMHACGHDAHTTMLLGAAKLLQSQKDDLKGTVKLVFQPAEEGYAGARYVLQEGVLDDVSAIFGLHVDPRIQVGTVTSRPGPFLAASGRFLATITGKGGHAAGPHNAVDPILTASSAIVSLQQIVARETDP 281          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: ILL8_ORYSJ (IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sativa subsp. japonica GN=ILL8 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 9.647e-73
Identity = 127/215 (59.07%), Postives = 166/215 (77.21%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI--GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            WL  +RR+IH+ PEL F+E  TS L+R ELD +G+PYA+PVA+TG+VA I  G+G+ PVVALRADMDALPLQELV+WE KS+  GKMHACGHD H TMLLGAAKLL  RKD+L+GT++++FQPAEEG AGA+H+++ G L D   IFG+H+   +P G +AS  GP ++A + F     G+GGHA +PH  +DP++  SS +L+LQQL+SRE DP
Sbjct:   56 WLSGLRRRIHQRPELAFQEVRTSELVRAELDAIGVPYAWPVARTGVVATIDGGAGAGPVVALRADMDALPLQELVDWEFKSQEKGKMHACGHDAHVTMLLGAAKLLQSRKDELKGTIKLVFQPAEEGHAGAYHVLESGLLDDVSVIFGLHVIPNLPVGVVASRPGPFMSAAARFAATFTGKGGHAGVPHDAVDPVVAVSSAVLSLQQLVSRETDP 270          
BLAST of DY258868 vs. ExPASy Swiss-Prot
Match: ILL3_ORYSJ (IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sativa subsp. japonica GN=ILL3 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.645e-72
Identity = 125/215 (58.14%), Postives = 164/215 (76.28%), Query Frame = 1
Query:  133 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQI--GSGSRPVVALRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLLHQRKDKLEGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP 771
            WL  +RR+IH++PEL F+EH TSAL+R ELD LG+ Y +PVA+TG+VA +   +G  PV  LRADMDALP+QE+VEWE KS  DGKMHACGHDVH  MLLGAAKLL  R+D   G V+++FQPAEEG AG +++++EGA+ D + IFGMH+D G+P G +AS  GP LA ++ F   + G+GGHAA PH  +DPI+  SS +L+LQQ+++RE DP
Sbjct:   25 WLRGLRRRIHQHPELAFQEHRTSALVRAELDALGVAYVWPVAQTGVVATVVGAAGPGPVFGLRADMDALPIQEMVEWEFKSLEDGKMHACGHDVHVAMLLGAAKLLQSRRDHFNGKVKLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATINGKGGHAAAPHHAVDPIVAVSSAVLSLQQIVARETDP 239          
The following BLAST results are available for this feature:
BLAST of DY258868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
ILL3_ARATH2.360e-9574.78IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsi... [more]
ILL5_ORYSJ6.897e-7965.75IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sati... [more]
ILL1_ORYSJ4.626e-7561.97IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ORYSI1.346e-7461.50IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL9_ORYSJ2.296e-7459.91IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sati... [more]
ILL4_ARATH5.115e-7460.28IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsi... [more]
ILL2_ARATH1.488e-7362.62IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL7_ORYSJ5.655e-7361.29IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sati... [more]
ILL8_ORYSJ9.647e-7359.07IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sati... [more]
ILL3_ORYSJ1.645e-7258.14IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DC12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258868 ID=DY258868; Name=DY258868; organism=Citrus clementina; type=EST; length=1140bp
CAACGGATTGTTATTGAGATGGCGATTGCCTTTTTGCTTCTTCTACTACC
GATCACTTATCTCACTACGACCACAGCAGTTGATGAAATACTTACAAATC
AAGTTATGATATCAGCTCAACAAGATAAAGATTGGCTAGTCTCTGTAAGA
AGACAAATCCATGAAAACCCGGAACTGCTATTCGAAGAACACAACACAAG
TGCCCTCATTCGCAGAGAACTTGATAAACTTGGAATCCCTTATGCATACC
CAGTCGCCAAAACAGGCATTGTAGCACAGATTGGCTCTGGTTCTCGCCCT
GTCGTCGCGTTGAGAGCTGACATGGATGCTCTCCCTTTGCAAGAGCTCGT
GGAATGGGAGCATAAGAGCAAAATTGATGGCAAAATGCACGCATGTGGAC
ATGACGTCCACACCACCATGCTTCTTGGTGCTGCCAAGTTGCTTCATCAA
CGTAAAGATAAACTTGAGGGAACTGTGAGAATTCTTTTCCAACCTGCTGA
GGAGGGAGGTGCAGGTGCCTTTCACATGATAAAAGAAGGCGCTCTTGGTG
ACTCTGAAGCAATATTTGGAATGCATATTGACGTAGGAATACCTACAGGA
AGTATAGCATCAATTTCTGGGCCACACTTGGCTGCTACATCCGTTTTTAA
TGTTAAAGTAGAGGGAAGAGGCGGACATGCTGCAATGCCCCATTCAACAA
TCGATCCTATACTTACTGCTTCATCTGTGATATTGGCATTGCAGCAACTT
ATTTCAAGAGAAGCAGATCCCCTCCAAAGTCTAGTATGTCTCAGTCTCCT
TTTATCAATTTATTCTGAAACCTGTGAACTTTTGCCATTGAAAGCATGAA
GAATTCTCCATTTCACTCTTAATAATTTTTACTGGAATTTTTACTGCTTG
AATGATTGCAAAGAAAAACTTGAAGTGAATATATCATTGGGTGAACTAAA
TACTAGTTTGGCTTTGGGCTGAAAGGGGGTTTCCTGTTACTTAAGTTTAA
AAGGGGGGAACTGGATTTTTAATAAAAATTCCCCCCTTTTGTTGGAATTT
TGGAAGGCCCTTTTGAGGAGATTCTTACAAACTTGGAGGGGCTTTTTATC
CCACCTCCCAAAAAAAAGGGGTGGGAAGGGAAGGGGTTGT
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