DY258892

Overview
NameDY258892
Unique NameDY258892
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1255
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig662 contig Ccv1_Contig662:388..1643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258892 vs. ExPASy Swiss-Prot
Match: BPE_ARATH (Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 4.774e-52
Identity = 128/228 (56.14%), Postives = 142/228 (62.28%), Query Frame = 3
Query:   93 GSYNFAEIWQFPVPXXXXXXXXXXXXXQKGAHFGQHLSQFGTNREVSGDDPVNLEHKMAHG-----NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNNRMNPGIEVFSPK 761
            G +N AEIWQFP+                   FG        N      DP  + H ++       +G  KRR+ E +SAK VST   +       + + KR K     D+    KAEAE    +  EQ  Q  EP K DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN+RMNPGIEVF PK
Sbjct:   11 GPFNLAEIWQFPLNGVSTAGDSSRRSFVGPNQFGDADLTTAAN-----GDPARMSHALSQAVIEGISGAWKRREDESKSAKIVSTIGAS-------EGENKRQKI----DEVCDGKAEAESLGTE-TEQKKQQMEPTK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPK 220          
BLAST of DY258892 vs. ExPASy Swiss-Prot
Match: BH079_ARATH (Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.139e-45
Identity = 131/280 (46.79%), Postives = 159/280 (56.79%), Query Frame = 3
Query:   96 SYNFAEIWQFPVPXXXXXXXXXXXXXQKGAHFGQHLSQFGTNREVSGDDPVNLEHK-----MAHGNGVRKRRDV--EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHS--KAEAEPSS----VKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNN--RMNPGIEVFSPKILLNNHLILRACHLVLQLQKNTSRVHHPTGCICRFGAGFERMT 890
            SY  +EIW FPV              + G     +  +  T  E SG+  V+   +     +  G G RK RD+  ED+S+K VS+SS   +GN + +S  K+ K  GS   N     + E E SS     K  EQ ++P EPPK DYIHVRARRGQATD HSLAERARREKISE+M  LQD++PGCNK+IGKALVLDEIINYIQSLQRQVEFLSMKLE VN+     P I VF P   L    I     +  Q + N +RV  P     +    F R T
Sbjct:   18 SYTLSEIWPFPV----------NDAVRSGLRLAVNSGRVFTRSEHSGNKDVSAAEESTVTDLTAGWGSRKTRDLNSEDDSSKMVSSSS---SGNELKESGDKKRKLCGSESGNGDGSMRPEGETSSGGGGSKATEQKNKP-EPPK-DYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTIGVF-PSGDLGTLPIDVHRTIYEQQEANETRVSQPEWLHMQVDGNFNRTT 281          
BLAST of DY258892 vs. ExPASy Swiss-Prot
Match: BH078_ARATH (Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 4.635e-39
Identity = 99/203 (48.77%), Postives = 128/203 (63.05%), Query Frame = 3
Query:  273 GNGVRKRRDVEDESAKH--VSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAE------QNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNN-RMNPGIEVFSPKILL----NNHLILRACHLVLQLQKNTSRVHH 842
            G   RKR+ V    +K   +ST+S + + ++  + +G +  +  S +     + E E    +  E       N++PPEPPK DYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+ R++  ++    K ++    NN L          LQ  +S  HH
Sbjct:  216 GEFSRKRKSVPKGKSKENPISTASPSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDDEEEEGEGEGNKSNNTKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRLHEEG------LQSKSSSHHH 411          
BLAST of DY258892 vs. ExPASy Swiss-Prot
Match: BH077_ARATH (Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.033e-38
Identity = 106/229 (46.29%), Postives = 129/229 (56.33%), Query Frame = 3
Query:  180 GAHFGQHLSQFGTNREVSGDDPVNLEHK---MAHGNGVRKR-RDVEDESAKHVSTSSGNGN----GNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQ---------NSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNNRM------NPGIEVFSPKILLNNHLILRAC 797
            G  F  +  QFG++RE  G  P   E     +   + V  R    +  S K  S  SGNG      + +  S+ K    +G       SK +   SS    E+         +++PPE PK DYIHVRARRGQATDSHSLAERARREKISERM +LQDLVPGCN++ GKA++LDEIINY+QSLQRQVEFLSMKL  VN RM      +   E+  P   L   L   AC
Sbjct:   67 GIRFPPYPGQFGSDREF-GSQPTTQESNKSSLLDPDSVSDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPK-DYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQPGESLTQSLYAMAC 293          
BLAST of DY258892 vs. ExPASy Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.349e-38
Identity = 96/211 (45.50%), Postives = 124/211 (58.77%), Query Frame = 3
Query:  228 VSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSG-SRDDNHHSKAEAEPSSVKPAEQNSQPPEP--PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNNRMNPGIEVFSPKILLNNHLILRACHLVLQLQKNTSRV---HH 842
            ++ + P+    KM   +       V    A HV     +G  +R   +  K+   S  S       K +++P   K +E+N    +   P +DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN R++  ++    K +  +   L     VLQL  +   +   HH
Sbjct:  166 INNEPPITTNEKMPRVSS----SPVFKPLASHVPAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSSNNLMHHQQVLQLDSSAETLLGDHH 372          
BLAST of DY258892 vs. ExPASy Swiss-Prot
Match: BH049_ARATH (Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.491e-37
Identity = 95/196 (48.47%), Postives = 118/196 (60.20%), Query Frame = 3
Query:  228 VSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPA-------EQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNNRMNPGIEVFSPKILLNNHLILRA 794
            V G   V+ + + + GNG + R     E++ +      NG  N       +  ++    D+N   K   E S   P        +Q  Q  +PPK  YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL  VN +M+  +E     +L  + L LRA
Sbjct:  208 VPGSGNVSEDTQSSGGNGQKGR-----ETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLE----GLLAKDALQLRA 394          
BLAST of DY258892 vs. ExPASy Swiss-Prot
Match: BH074_ARATH (Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.632e-34
Identity = 74/124 (59.68%), Postives = 95/124 (76.61%), Query Frame = 3
Query:  405 DDNHHSKAEAEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNNRMNPGIEVFSPKILLNN 776
            +D    K + + S     +++SQ  E PK++YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL  VN  +N  I+    K LL +
Sbjct:  172 NDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQS 295          
BLAST of DY258892 vs. ExPASy Swiss-Prot
Match: BH076_ARATH (Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.306e-33
Identity = 84/173 (48.55%), Postives = 106/173 (61.27%), Query Frame = 3
Query:  300 VEDESAKHVSTSSGNGNGNRVNDSD-------------GKRIKTSGSRDDNHHSKAEAEPSS-VKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNNRMNPGIEVFSPKILLNN 776
            V++ S  +VS  S +  GN  +D+               KRI      +++   K E  P+S         QP +  K  YIH+RARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQ Q+EFLSMKL AVN  ++  +E    K  L +
Sbjct:  140 VKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQS 312          
BLAST of DY258892 vs. ExPASy Swiss-Prot
Match: BH063_ARATH (Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.106e-32
Identity = 89/198 (44.95%), Postives = 115/198 (58.08%), Query Frame = 3
Query:  180 GAHFGQHLSQFGTN-------REVSGDDPVNLEHKMAHGNGVRKRRDVEDESAKHVSTSSGNGNGNRVN-DSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNS-------QPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNNR 728
            G     +LS  G N         V GD  +++  +   G G  K+R  + E+ K  +        NR +   +G+  K+  +  +N  +K+  +       E+N+          E  K DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QSLQRQ+EFLSMKL  VN R
Sbjct:   49 GGEMDSYLSTAGLNLPMMYGETTVEGDSRLSISPETTLGTGNFKKRKFDTET-KDCNEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPR 245          
BLAST of DY258892 vs. ExPASy Swiss-Prot
Match: BH064_ARATH (Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 7.167e-32
Identity = 76/131 (58.02%), Postives = 89/131 (67.94%), Query Frame = 3
Query:  378 KRIKTSGSRDDNHHSKAE---AEPSSVKPAEQNSQPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNNRMNPGIEVFSPK 761
            K+IK     + +   K+     E SS    E +    E  K DYIHVRARRGQATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQVEFLSMKL  +N  +   +E  S K
Sbjct:  139 KKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVK 269          
The following BLAST results are available for this feature:
BLAST of DY258892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
BPE_ARATH4.774e-5256.14Transcription factor BPE OS=Arabidopsis thaliana G... [more]
BH079_ARATH1.139e-4546.79Transcription factor bHLH79 OS=Arabidopsis thalian... [more]
BH078_ARATH4.635e-3948.77Transcription factor bHLH78 OS=Arabidopsis thalian... [more]
BH077_ARATH1.033e-3846.29Transcription factor bHLH77 OS=Arabidopsis thalian... [more]
BH062_ARATH1.349e-3845.50Transcription factor bHLH62 OS=Arabidopsis thalian... [more]
BH049_ARATH1.491e-3748.47Transcription factor bHLH49 OS=Arabidopsis thalian... [more]
BH074_ARATH2.632e-3459.68Transcription factor bHLH74 OS=Arabidopsis thalian... [more]
BH076_ARATH1.306e-3348.55Transcription factor bHLH76 OS=Arabidopsis thalian... [more]
BH063_ARATH1.106e-3244.95Transcription factor bHLH63 OS=Arabidopsis thalian... [more]
BH064_ARATH7.167e-3258.02Transcription factor bHLH64 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3DF09FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258892 ID=DY258892; Name=DY258892; organism=Citrus clementina; type=EST; length=1255bp
GTTTCTTGAATCTTCTCAAATAAATGCCAGGACCTGGTTTGATGAGCGCT
TGAGTTCGAGTGTTGTCTGTGAGATTATTGTAGATGGATCAGGGTTCCTA
TAATTTTGCAGAGATCTGGCAGTTTCCGGTTCCCGGGAGTGGCAGTATGA
GTGAATCTGGCGGTGGGTTGGGGCAGAAAGGAGCTCACTTTGGGCAGCAT
TTGAGTCAATTTGGGACTAATCGAGAGGTTTCTGGTGATGATCCAGTGAA
CTTGGAGCATAAAATGGCCCATGGGAATGGAGTAAGGAAGCGGCGTGATG
TGGAGGATGAGTCAGCCAAGCATGTATCTACAAGCAGTGGCAACGGCAAC
GGCAATCGAGTGAATGATTCTGATGGAAAACGGATTAAAACATCTGGAAG
TAGAGATGACAATCACCATTCCAAAGCTGAAGCAGAGCCCAGTTCGGTCA
AGCCTGCTGAACAAAATAGTCAACCACCGGAGCCTCCTAAACAGGATTAC
ATCCATGTACGAGCAAGAAGGGGCCAAGCTACTGATAGCCACAGTTTAGC
AGAAAGAGCTAGGAGAGAAAAGATAAGCGAAAGGATGAAAATTCTCCAGG
ACTTGGTTCCTGGTTGTAACAAGGTCATCGGCAAAGCATTGGTCCTGGAT
GAGATAATTAACTACATCCAATCGCTACAGCGGCAGGTTGAGTTTCTGTC
AATGAAGCTTGAAGCAGTCAATAACAGAATGAACCCTGGCATTGAGGTAT
TTTCTCCTAAGATTTTACTCAACAACCATTTGATACTGCGGGCATGCCAT
TTGGTTCTCCAGCTACAAAAAAATACCAGCCGGGTACATCACCCGACTGG
TTGCATATGCCGATTTGGAGCCGGTTTTGAAAGAATGACCTAAAAAGAAT
AAAAAAATCCTTGCCAGTAAATAAAAGAATAATGGCTTTAAGTGGGCGAT
GCCTTCCCTCCTTTAATGTTTGCCAAATTCCTTCTCTTAAAAAAGACCCA
GTTCCCCAATTTTTCCAAATCCAACCCTGGGGAACCTGTTCGTTTGATTT
TCTTGAAAAAATTTTTTTTGCTTTTTCGTATTGGGAAACAAGGAATTTCC
TTTTTTCCCCCCAATATATTTTTTTTATTTAAGGCCTCCCCCCCCCCCTG
GGTTACATTATAAAATCTTAAAAACAACAAAACCATTTGGTGGAAAAAAA
AAAACTCTAAAAAAAAACCACAAATAATTCCTCTTTTTCCTTTCCTTTTC
TTTTT
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