DY259734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB6_TOBAC (Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 335.109 bits (858), Expect = 4.814e-96 Identity = 165/188 (87.77%), Postives = 175/188 (93.09%), Query Frame = 2 Query: 83 DFNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 D + PHSMGTTIIGVTYNGGVVLGADSRTSTG+YVANRASDKITQLTDNVY+CRSGSAADSQ VSDYVRYFLHQHTIQLGQPATVKVAANL RLLSYNNK+ LQTGMI+GGWDKYEGGKIYG+P GGT++EQPFAI YLYGFFDQAWKEGMT+EEAE+LVV AVSLAIARDGASGGVVRTVTI Sbjct: 5 DVDQPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWDKYEGGKIYGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGASGGVVRTVTI 192 HSP 2 Score: 39.2762 bits (90), Expect = 4.814e-96 Identity = 16/25 (64.00%), Postives = 19/25 (76.00%), Query Frame = 1 Query: 652 EGVSRKFHPGHPLPLWHEELEPQNS 726 +G +RKF+ G L LWHEELEP NS Sbjct: 195 DGATRKFYSGDSLQLWHEELEPVNS 219
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB6_ARATH (Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1 SV=2) HSP 1 Score: 345.51 bits (885), Expect = 3.186e-94 Identity = 174/231 (75.32%), Postives = 192/231 (83.12%), Query Frame = 2 Query: 65 MDLKMEDFNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTIILKE*AESSTPATPFPCGMRSWSPKIPLLDLMNVARP 757 MDL ++ APHSMGTTIIGVTYNGGVVLGADSRTSTG+YVANRASDKITQLTDNVY+CRSGSAADSQ VSDYVRYFLHQHTIQ GQPATVKV+ANL+R+L+YNNKN LQTG+IVGGWDKYEGGKIYG+PLGGT++EQPFAI YLYGFFDQAWK+ MTKEEAEQLVVKAVSLAIARDGASGGVVRTV I + + P P+ LLD++N A P Sbjct: 1 MDLNLD---APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGP 228
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB6_DICDI (Proteasome subunit beta type-6 OS=Dictyostelium discoideum GN=psmB6 PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.769e-52 Identity = 94/181 (51.93%), Postives = 134/181 (74.03%), Query Frame = 2 Query: 104 MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 +GT+I+ V Y+GGV++GADSRT+TG Y+ANR ++KIT + + +Y CRSGSAAD+Q +SDYVRY+L HT +L VK AA+L +LL Y+NKN L G+IV GWDK++GG +Y + LGG++++QPFAI Y+YG+ D +K MTK+E + V +++LA+ RDG+SGGV+R I Sbjct: 13 LGTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHERIYCCRSGSAADTQAISDYVRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQGGSVYNISLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSLALAMFRDGSSGGVIRLCII 193
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB6_BOVIN (Proteasome subunit beta type-6 OS=Bos taurus GN=PSMB6 PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 2.162e-50 Identity = 94/186 (50.54%), Postives = 129/186 (69.35%), Query Frame = 2 Query: 89 NAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 N S GTTI+ V ++GGVVLGADSRT+TG Y+ANR +DK+T + D ++ CRSGSAAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+GG ++ QPFAI Y+YG+ D ++EGMTKEE Q A++LA+ RDG+SGGV+R I Sbjct: 28 NREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAI 213
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB6_MOUSE (Proteasome subunit beta type-6 OS=Mus musculus GN=Psmb6 PE=1 SV=3) HSP 1 Score: 197.978 bits (502), Expect = 8.215e-50 Identity = 93/186 (50.00%), Postives = 129/186 (69.35%), Query Frame = 2 Query: 89 NAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 N S GTTI+ V +NGGVVLGADSRT+TG Y+ANR +DK+T + D+++ CRSGSAAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+GG ++ Q FAI Y+YG+ D ++EGMTK+E Q A++LA+ RDG+SGGV+R I Sbjct: 27 NREVSTGTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAI 212
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB6_HUMAN (Proteasome subunit beta type-6 OS=Homo sapiens GN=PSMB6 PE=1 SV=4) HSP 1 Score: 196.438 bits (498), Expect = 2.390e-49 Identity = 92/182 (50.55%), Postives = 127/182 (69.78%), Query Frame = 2 Query: 101 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 S GTTI+ V ++GGVVLGADSRT+TG Y+ANR +DK+T + D ++ CRSGSAAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+GG ++ Q FAI Y+YG+ D ++EGMTKEE Q A++LA+ RDG+SGGV+R I Sbjct: 32 STGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAI 213
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB6_RAT (Proteasome subunit beta type-6 OS=Rattus norvegicus GN=Psmb6 PE=1 SV=3) HSP 1 Score: 196.052 bits (497), Expect = 3.122e-49 Identity = 92/186 (49.46%), Postives = 129/186 (69.35%), Query Frame = 2 Query: 89 NAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 N S GTTI+ V ++GGVVLGADSRT+TG Y+ANR +DK+T + D+++ CRSGSAAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+GG ++ Q FAI Y+YG+ D ++EGMTK+E Q A++LA+ RDG+SGGV+R I Sbjct: 27 NREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAI 212
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB6_SCHPO (Probable proteasome subunit beta type-6 OS=Schizosaccharomyces pombe GN=SPBC4C3.10c PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 5.325e-49 Identity = 91/181 (50.28%), Postives = 127/181 (70.17%), Query Frame = 2 Query: 104 MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 MGTTI + Y GV+L ADSRT+ G Y+ANR +DK+TQLTDN++ CRSGSAAD+QTV+D ++Y+L + IQ G +V AA L + Y NKN L G+IV G+D+ GG +Y +PLGG++ +QP AI ++YGF D ++E MT+EEA + + AV+LA+ RDG+SGG +R V + Sbjct: 23 MGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMVIL 203
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB6_YEAST (Proteasome component PRE3 OS=Saccharomyces cerevisiae GN=PRE3 PE=1 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 3.343e-43 Identity = 83/182 (45.60%), Postives = 129/182 (70.88%), Query Frame = 2 Query: 101 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 S+GT+I+ VT+ GV+LGADSRT+TG Y+ANR +DK+T++ D ++ CRSGSAAD+Q ++D V+Y L +T Q G P+T + AA++ + L Y NK+ L G+IV G+D G++Y +PLGG++ + P+AI ++YG+ D+ ++E M+KEE + ++S AI DG+SGGV+R V + Sbjct: 17 SLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPST-ETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVL 197
BLAST of DY259734 vs. ExPASy Swiss-Prot
Match: PSB9_RAT (Proteasome subunit beta type-9 OS=Rattus norvegicus GN=Psmb9 PE=1 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 3.696e-42 Identity = 84/180 (46.67%), Postives = 119/180 (66.11%), Query Frame = 2 Query: 107 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 646 GTTI+ V ++GGVV+G+DSR S G V NR DK++ L +Y SGSAAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L ++V GWD++EGG++YG +GG +I QPFAI Y+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQHEGGQVYGT-MGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTI 198 The following BLAST results are available for this feature:
BLAST of DY259734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259734 ID=DY259734; Name=DY259734; organism=Citrus clementina; type=EST; length=1086bpback to top |