DY259753

Overview
NameDY259753
Unique NameDY259753
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9329 contig Ccv1_Contig9329:23..563. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY259753 vs. ExPASy Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.832e-13
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 2 
Query:  182 CNGKSSWPELVGVNGEIAAATIQKENPNVHAIIILEGTPVTQDFRCXXXXXXXXXXXXXXXXPRIG 379
            C GKSSWP LVGV G +A A I+++NPNV A+I+ EGTPVT+DFRC                PRIG
Sbjct:    3 CPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRIG 68
[Close]
BLAST of DY259753 vs. ExPASy Swiss-Prot
Match: ICI_LINUS (Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.005e-11
Identity = 28/46 (60.87%), Postives = 40/46 (86.96%), Query Frame = 2 
Query:  182 CNGKSSWPELVGVNGEIAAATIQKENPNVHAIIILEGTPVTQDFRC 319
            C GK++WPELVG +G +AAAT+++EN NVHAI++ EG+ +T+DFRC
Sbjct:    4 CPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRC 49
The following BLAST results are available for this feature:
BLAST of DY259753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ITH5_CUCMA1.832e-1353.03Inhibitor of trypsin and hageman factor OS=Cucurbi... [more]
ICI_LINUS1.005e-1160.87Proteinase inhibitor OS=Linum usitatissimum PE=1 S... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAP10YB13FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259753 ID=DY259753; Name=DY259753; organism=Citrus clementina; type=EST; length=542bp
AATAATTGAAAACTTTTCAACAATGAAGAACACAGTACTAGCACTAGCTT
TCTTCGTCTTTCTCTTTGCCTTTGCTGCAAAACCATCTTTGGCTGCTCGT
CATGAGCCGTTAGTGCTTCATTCGGATGGCCAGGAGCTCCTCATGGCTAC
CAGCAATTGCGATATCGTAACTCAATTTGAGTGTAATGGCAAGAGCTCAT
GGCCAGAACTGGTTGGTGTAAACGGGGAGATTGCTGCTGCTACGATACAG
AAAGAGAATCCTAATGTTCATGCAATCATAATACTTGAGGGAACTCCAGT
TACACAAGATTTTCGTTGTGATCGGGTTCGAGTTGTGGTTGACAAATATG
AGAAGGTGGTTCAAGTTCCTCGGATTGGCTGAACTTCGACGATTATCTGC
AATCATCATGGCTGGATGGATGGTCAGGATTAACTGCTTGTTTATAATCC
CTTAACTATGTATTAGTAAAATAAATGAACAAGTAGTGTTGTTTAATAAA
GCATGCATGGGATGTGCGTGATATCCAACAATCGGGTTCTAC
back to top