DY259761

Overview
NameDY259761
Unique NameDY259761
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1217
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY259761 vs. ExPASy Swiss-Prot
Match: PSA3_ORYSJ (Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica GN=PAG1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.164e-11
Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 3
Query:    3 EMTPSRGATEAAKSRHGAHEEAKDKAPELEMSWVCDESNRQHQKVP 140
            E+T   G  E AK  +G H+EAKDKA ELE+SW+CDESNRQHQKVP
Sbjct:  183 ELTCREGIVEVAKIIYGVHDEAKDKAFELELSWICDESNRQHQKVP 228          
The following BLAST results are available for this feature:
BLAST of DY259761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PSA3_ORYSJ5.164e-1167.39Proteasome subunit alpha type-3 OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP10YB22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259761 ID=DY259761; Name=DY259761; organism=Citrus clementina; type=EST; length=1217bp
CTGAAATGACCCCCTCACGAGGGGCCACCGAAGCAGCCAAGAGCAGGCAC
GGAGCGCACGAAGAGGCCAAGGACAAGGCCCCCGAACTTGAAATGAGCTG
GGTCTGTGATGAATCAAACCGCCAGCATCAGAAGGTACCAGATGAGCTTC
TTGAGGAAGCTAAGGCAGCCGCCAGAGCAGCGTTGGAAGAGATGGATGCA
GATTACTGTAGCAGAGTTGATAATATTTGGTTACTAGTTTGATGCCATTT
CCGGGCTTGTCTTGGAATACTTTTCGGAACATTTTCAAAATATTTAACAG
ATTGGTGGACTCCCTTGATGGCTGACGGCTTCAAACTAAAAGAAAAAACA
CAAAACCCCCCTCCTCCCCTGTCCAAGTTGGCATTAATACAAAGGCCTCG
CCAACCCATTTTTGCCCCGAATCAATCTATACCACTCCAAATAACAATCA
CTATTTACTACCCCCCTCGAACCCCCCACAATTAATCCGAACTACACCGT
AAACGCTGTTCTCCGGACCCCCCAGCCCCGCGTCGCAACTCCCGGTGATC
CCCACATCTCCACAACACCACCAGCCCATCCACCCTCCTCAATCACCCCC
CACTCCCCCACCTCCCCCCGTGCAGCACACCCCCCCACAGCTACTCCCAA
ACCCAACCCTTACATGGCCTCCTCCCCCTCACGATCGGACTATCCACCCC
GCAAGCCCCCCCCCAACACAGCCAGAAGCTTGCTCGTAACCCACAACCGT
CCACGCCTCCCTTACGTCAGCCGACTCCACCTTCTTCCCGTACCTCCCTC
CACCCCTCAACCCCCCCACACCGCCTTACACATTGAACCCAACACCCACA
CCCCATACGCTCTCATCAAACCCCTACCTTCCGCCTCCTTCGCCCCACCC
CCTCTCCTTTTCCTTCATCCCTCTCCTCCTCCACTGCGCCTACCTCCTCC
ATCAAATTATACCTTCACCTCTTTTCTCATGTTATACTTTCTCCCCTCCT
CTCCTCTCCAGCCAACACCCACCCCTCCTTCCACCTTCACTCTCCCCTCA
CTTACTCCTTCGATCTCCCCCCCCCTCTCCCCCCACCCTCCCACCCCCAC
CCTCCCCCCCCCCTTTCCACCTCCCCCTCCTCTCCCCCATCACTCCCCCC
CCCTCCCACCTCCCCCTCCCCCCCCCCGCCCCTCCCCTCACCCCCCCCCC
CCCACCCCCCACCGCCC
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