DY259764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259764 vs. ExPASy Swiss-Prot
Match: ATL4M_ARATH (RING-H2 finger protein ATL4M OS=Arabidopsis thaliana GN=ATL4M PE=2 SV=2) HSP 1 Score: 303.523 bits (776), Expect = 1.377e-81 Identity = 157/219 (71.69%), Postives = 176/219 (80.37%), Query Frame = 2 Query: 74 MSSLSLCGNFFERVKEFCNFAVSAVIGNIFSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVEVSFDEAPNIFDTGLSKGLTGESVDKIPKITITDKNNIDASGERASCSVCLQDFQLGETARSXXXXXXXXXXXXXDKWLPGHPSLPI 730 +SS NF ER+K+ C F +SAV+G I SA+ TFFFALVGTLLGA+TGALIGQETESGF+RGAAVGAISGAVFSIEVFESSLVLW+S+ES GCLLYLIDVI SL+SGRLVRERIGPAMLSAVQSQMGAV+ +F+E +IFDTG SKGLTG+ VDKIPKI IT KNN+DASG + SCSVCLQDFQLGET RS D WL H S P+ Sbjct: 13 ISSCPSLENFIERIKDACRFTLSAVLGTILSAVLTFFFALVGTLLGALTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWKSNESRFGCLLYLIDVIVSLISGRLVRERIGPAMLSAVQSQMGAVDSTFEELSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPM 231
BLAST of DY259764 vs. ExPASy Swiss-Prot
Match: ATL2B_ARATH (RING-H2 finger protein ATL2B OS=Arabidopsis thaliana GN=ATL2B PE=2 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 3.067e-81 Identity = 156/221 (70.59%), Postives = 175/221 (79.19%), Query Frame = 2 Query: 68 FSMSSLSLCGNFFERVKEFCNFAVSAVIGNIFSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVEVSFDEAPNIFDTGLSKGLTGESVDKIPKITITDKNNIDASGERASCSVCLQDFQLGETARSXXXXXXXXXXXXXDKWLPGHPSLPI 730 + +SS GNF ER+K+ C+F VSAV+G I SAI TFFFALVGTLLGA+TGALIGQETESGF+RGAA+GAISGAVFSIEVFESSL LW+SDESG GC LYLIDVI SLLSGRLVRERIGPAMLSAVQSQMGAV+ +FD+ ++FDTG SKGLTG+ V+KIPK+TIT NN DAS SCSVCLQDFQLGET RS D WL H S P+ Sbjct: 16 YPLSSSPSLGNFVERIKDACHFLVSAVLGTIISAILTFFFALVGTLLGALTGALIGQETESGFIRGAAIGAISGAVFSIEVFESSLDLWKSDESGFGCFLYLIDVIVSLLSGRLVRERIGPAMLSAVQSQMGAVDTAFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPM 236
BLAST of DY259764 vs. ExPASy Swiss-Prot
Match: ATL5P_ARATH (RING-H2 finger protein ATL5P OS=Arabidopsis thaliana GN=ATL5P PE=2 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 2.058e-77 Identity = 153/221 (69.23%), Postives = 177/221 (80.09%), Query Frame = 2 Query: 68 FSMSSLSLCGNFFERVKEFCNFAVSAVIGNIFSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVEVSFDEAPNIFDTGLSKGLTGESVDKIPKITITDKNNIDASGERASCSVCLQDFQLGETARSXXXXXXXXXXXXXDKWLPGHPSLPI 730 +S+S +S+ R+K+ +FAVSA++ N+FSA+FTFFFALVGTLLGA+TGALIGQETESGF+RGAAVGAISGAVFSIEVFESSL+LWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVE F + +IFDT +SKGLTG+S+++IPK+ IT D S E SCSVCLQDFQ+GET RS DKWL H S P+ Sbjct: 5 YSLSPISV----LHRIKDSFHFAVSALLANLFSALFTFFFALVGTLLGALTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLLLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRIT-----DTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPL 216
BLAST of DY259764 vs. ExPASy Swiss-Prot
Match: ATL1Q_ARATH (RING-H2 finger protein ATL1Q OS=Arabidopsis thaliana GN=ATL1Q PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 2.550e-27 Identity = 68/208 (32.69%), Postives = 113/208 (54.33%), Query Frame = 2 Query: 107 ERVKEFCNFAVSAVIGNIFSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVEVSFDEAPNIFDTGLSKGLTGESVDKIPKITITDKNNIDASGERASCSVCLQDFQLGETARSXXXXXXXXXXXXXDKWLPGHPSLPI 730 E++ + VS +I +FS T FA+ G GA+TGA+ G+ + G +RGAA+GA++GA+ S+EV E+S W + SG + D + L GRLV E++ M+++ Q+ +VS++E +++ ++GL+G+S+ K+P ++ + + C++CLQD + GE RS DKWL H S PI Sbjct: 12 EQIADSTIDTVSRLIAGVFSGALTGIFAMAGAFTGAVTGAVAGRAAQYGVLRGAALGAVAGAILSVEVLEASRAYWYLELSGSRGPSSMADFVEQLFRGRLVDEQLMSTMINSHHWQLRISDVSYEEREDVYGELEARGLSGDSLRKLPCYIMSSEM---VRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPI 216 The following BLAST results are available for this feature:
BLAST of DY259764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY259764 ID=DY259764; Name=DY259764; organism=Citrus clementina; type=EST; length=1078bpback to top |