DY259768

Overview
NameDY259768
Unique NameDY259768
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length920
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1304 contig Ccv1_Contig1304:1..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY259768 vs. ExPASy Swiss-Prot
Match: U0468_DROME (UPF0468 protein CG5343 OS=Drosophila melanogaster GN=CG5343 PE=1 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 3.363e-91
Identity = 155/189 (82.01%), Postives = 177/189 (93.65%), Query Frame = 1 
Query:   70 MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHVKRPHDEDIQSNVLEIVGPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQK 636
            MFKNTFQSGFLSILYS+GSKPLQ+WDK+V +GH+KR  D DIQS VLEIVG NV +T+ITCP DP  TLGIKLPFLVMI+KN+KKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLD+GWNQIQ NL+DFTRRAYGTNYVETLRVQ+HANCR+RR+YFSDRLYSE+ELPPEFKL+LP+QK
Sbjct:    1 MFKNTFQSGFLSILYSIGSKPLQLWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTFITCPADPKKTLGIKLPFLVMIIKNMKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDEGWNQIQFNLSDFTRRAYGTNYVETLRVQIHANCRIRRVYFSDRLYSEDELPPEFKLFLPIQK 189
[Close]
BLAST of DY259768 vs. ExPASy Swiss-Prot
Match: CP080_MOUSE (UPF0468 protein C16orf80 homolog OS=Mus musculus GN=Gtl3 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 9.786e-91
Identity = 156/188 (82.98%), Postives = 174/188 (92.55%), Query Frame = 1 
Query:   70 MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHVKRPHDEDIQSNVLEIVGPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 633
            MFKNTFQSGFLSILYS+GSKPLQIWDK+V +GH+KR  D DIQS VLEI G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:    1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of DY259768 vs. ExPASy Swiss-Prot
Match: CP080_BOVIN (UPF0468 protein C16orf80 homolog OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 9.786e-91
Identity = 156/188 (82.98%), Postives = 174/188 (92.55%), Query Frame = 1 
Query:   70 MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHVKRPHDEDIQSNVLEIVGPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 633
            MFKNTFQSGFLSILYS+GSKPLQIWDK+V +GH+KR  D DIQS VLEI G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:    1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of DY259768 vs. ExPASy Swiss-Prot
Match: CP080_XENTR (UPF0468 protein C16orf80 homolog OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.278e-90
Identity = 155/188 (82.45%), Postives = 174/188 (92.55%), Query Frame = 1 
Query:   70 MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHVKRPHDEDIQSNVLEIVGPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 633
            MFKNTFQSGFLSILYS+GSKPLQIWDK+V +GH+KR  D DIQS VLE+ G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:    1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEVEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of DY259768 vs. ExPASy Swiss-Prot
Match: CP080_XENLA (UPF0468 protein C16orf80 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.278e-90
Identity = 155/188 (82.45%), Postives = 174/188 (92.55%), Query Frame = 1 
Query:   70 MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHVKRPHDEDIQSNVLEIVGPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 633
            MFKNTFQSGFLSILYS+GSKPLQIWDK+V +GH+KR  D DIQS VLE+ G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:    1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEVEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of DY259768 vs. ExPASy Swiss-Prot
Match: CP080_DANRE (UPF0468 protein C16orf80 homolog OS=Danio rerio GN=zgc:73380 PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.278e-90
Identity = 155/188 (82.45%), Postives = 174/188 (92.55%), Query Frame = 1 
Query:   70 MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHVKRPHDEDIQSNVLEIVGPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 633
            MFKNTFQSGFLSILYS+GSKPLQIWDK+V +GH+KR  D DIQS VLE+ G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:    1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEVEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of DY259768 vs. ExPASy Swiss-Prot
Match: CP080_CHICK (UPF0468 protein C16orf80 homolog OS=Gallus gallus GN=RCJMB04_34o2 PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.278e-90
Identity = 155/188 (82.45%), Postives = 174/188 (92.55%), Query Frame = 1 
Query:   70 MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHVKRPHDEDIQSNVLEIVGPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 633
            MFKNTFQSGFLS+LYS+GSKPLQIWDK+V +GH+KR  D DIQS VLEI G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL+DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:    1 MFKNTFQSGFLSVLYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of DY259768 vs. ExPASy Swiss-Prot
Match: CP080_HUMAN (UPF0468 protein C16orf80 OS=Homo sapiens GN=C16orf80 PE=1 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.669e-90
Identity = 156/188 (82.98%), Postives = 173/188 (92.02%), Query Frame = 1 
Query:   70 MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHVKRPHDEDIQSNVLEIVGPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 633
            MFKNTFQSGFLSILYS+GSKPLQIWDK+V +GH+KR  D DIQS VLEI G NV +TYITCP DP  TLGIKLPFLVMI+KNLKKYFTFE+QVLDDKNVRRRFRASN+Q+ TRVKP+ICTMP+RLDDGWNQIQ NL DFTRRAYGTNY+ETLRVQ+HANCR+RR+YFSDRLYSE+ELP EFKLYLP+Q
Sbjct:    1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQ 188
[Close]
BLAST of DY259768 vs. ExPASy Swiss-Prot
Match: CP080_CAEBR (UPF0468 protein C16orf80 homolog OS=Caenorhabditis briggsae GN=CBG09753 PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 6.358e-82
Identity = 132/188 (70.21%), Postives = 169/188 (89.89%), Query Frame = 1 
Query:   70 MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHVKRPHDEDIQSNVLEIVGPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 633
            MF NTFQSG LS+LYS+GSKPLQIWD ++ +GHVKR  DE+IQS VLEI+G N+ + +I+CP+DP  TLGIKLPF VM+VKN+ KYF+FE+Q++DDK ++RRFRASN+Q+ TRVKP+ICTMP+R+D+GWNQIQ NL+DF +RAYGTNYVETLR+Q+HANCR+RR+YF+DRLY+E+ELP EFKLYLP++
Sbjct:    1 MFHNTFQSGLLSVLYSIGSKPLQIWDTQIKNGHVKRITDEEIQSLVLEIMGNNISTAFISCPVDPEKTLGIKLPFFVMVVKNMNKYFSFEVQIIDDKKIKRRFRASNYQSATRVKPFICTMPMRMDEGWNQIQFNLSDFVKRAYGTNYVETLRIQIHANCRIRRVYFADRLYTEDELPAEFKLYLPIR 188
[Close]
BLAST of DY259768 vs. ExPASy Swiss-Prot
Match: CP080_CAEEL (UPF0468 protein C16orf80 homolog OS=Caenorhabditis elegans GN=C54C6.6 PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 8.303e-82
Identity = 132/188 (70.21%), Postives = 169/188 (89.89%), Query Frame = 1 
Query:   70 MFKNTFQSGFLSILYSLGSKPLQIWDKEVVDGHVKRPHDEDIQSNVLEIVGPNVQSTYITCPIDPAATLGIKLPFLVMIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRLDDGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 633
            MF NTFQSG LS+LYS+GSKPLQIWD ++ +GHVKR  DE+IQS VLEI+G N+ + +I+CP+DP  TLGIKLPF VM+VKN+ KYF+FE+Q++DDK ++RRFRASN+Q+ TRVKP+ICTMP+R+D+GWNQIQ NL+DF +RAYGTNYVETLR+Q+HANCR+RR+YF+DRLY+E+ELP EFKLYLP++
Sbjct:    1 MFHNTFQSGLLSVLYSIGSKPLQIWDTQIKNGHVKRITDEEIQSLVLEIMGNNISTAFISCPVDPDKTLGIKLPFFVMVVKNMNKYFSFEVQIIDDKKIKRRFRASNYQSATRVKPFICTMPMRMDEGWNQIQFNLSDFVKRAYGTNYVETLRIQIHANCRIRRVYFADRLYTEDELPAEFKLYLPIR 188
The following BLAST results are available for this feature:
BLAST of DY259768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
U0468_DROME3.363e-9182.01UPF0468 protein CG5343 OS=Drosophila melanogaster ... [more]
CP080_MOUSE9.786e-9182.98UPF0468 protein C16orf80 homolog OS=Mus musculus G... [more]
CP080_BOVIN9.786e-9182.98UPF0468 protein C16orf80 homolog OS=Bos taurus PE=... [more]
CP080_XENTR1.278e-9082.45UPF0468 protein C16orf80 homolog OS=Xenopus tropic... [more]
CP080_XENLA1.278e-9082.45UPF0468 protein C16orf80 homolog OS=Xenopus laevis... [more]
CP080_DANRE1.278e-9082.45UPF0468 protein C16orf80 homolog OS=Danio rerio GN... [more]
CP080_CHICK1.278e-9082.45UPF0468 protein C16orf80 homolog OS=Gallus gallus ... [more]
CP080_HUMAN1.669e-9082.98UPF0468 protein C16orf80 OS=Homo sapiens GN=C16orf... [more]
CP080_CAEBR6.358e-8270.21UPF0468 protein C16orf80 homolog OS=Caenorhabditis... [more]
CP080_CAEEL8.303e-8270.21UPF0468 protein C16orf80 homolog OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YC08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259768 ID=DY259768; Name=DY259768; organism=Citrus clementina; type=EST; length=920bp
CGAGGACCAAACAGGTACCGGAACAGGAATCATCATCGGTTGTCTTCTTC
AAGTTGAGATTGTCCAAAGATGTTCAAGAACACATTTCAATCAGGATTCT
TGTCAATCTTATACAGCCTTGGGAGCAAACCTCTGCAAATATGGGATAAA
GAAGTTGTCGATGGTCATGTGAAACGACCTCACGATGAAGACATACAGTC
CAATGTACTTGAAATAGTTGGGCCAAATGTACAATCTACATACATTACAT
GCCCCATAGACCCAGCAGCAACTCTTGGTATAAAACTCCCATTTTTGGTT
ATGATTGTCAAGAACCTGAAGAAATATTTCACATTTGAGATTCAAGTACT
GGATGATAAAAATGTCCGTCGGCGTTTTCGAGCTTCTAACTTCCAAGCTG
TTACGCGGGTGAAGCCATATATCTGCACCATGCCACTGAGGTTGGATGAT
GGCTGGAATCAGATCCAGTTGAACCTGGCTGATTTTACCAGGAGAGCATA
TGGAACCAACTATGTTGAAACTTTACGAGTTCAGGTTCATGCAAACTGTC
GCCTCAGAAGGATATATTTCTCGGATCGCCTGTACTCGGAAGAAGAACTC
CCACCGGAATTTAAGCTGTACCTTCCAATGCAGAAAACATGACTTTCAGG
GAAGGAGAGCTTCACACTTGCAATTATTGTGATTTCAGATTCTAAATGCT
ATATGCTAATTCAGATTCTAAATGCCATATGCTATTCTTAGAAGCTGACT
CAGTTTTATCCGAGTTGTTTTTGGAAGGTTTTAATGAAATGGAAAAAAAG
AACTAAAAATATCCTAAAATTGATCCACTAACCAAATAACTAGATGGTGG
TTAACCGGTTCCTTCCCCAAATTTTTCTATGTCCATAAACAAAAGGGATC
CCTTGGCCCCTTTATGCCAT
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