DY259770

Overview
NameDY259770
Unique NameDY259770
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length994
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1306 contig Ccv1_Contig1306:1..994. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259770 vs. ExPASy Swiss-Prot
Match: FPP7_ARATH (Filament-like plant protein 7 OS=Arabidopsis thaliana GN=FPP7 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.861e-40
Identity = 98/256 (38.28%), Postives = 151/256 (58.98%), Query Frame = 3
Query:  225 ERSMKNLNEKLASVIFDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDEALKPPLSANENLPYAGAATAPMRCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERVTKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKGNAFLKYEFRILEKELEISNEEMEYTRRSGEATINRHWESVKKVPSLKTEWEKAPPFGGKKAGWGPAASAKIKSRIPNGGEKIPNG 992
            E  +K+LN+KL SV  + +       K     QEA  G EK +   A +KK+LDEAL     + E   +  A      CV+QL F + EQE+R+HDA+ K S E+E+    ++  L  + +R+ +   EN+ LSKALL K K +EDL++ + + E +F++L++ L+  EK N  L+YE R+LEKELE+ NEE E++RR+ EA+   H E+VKKV  L++E ++      K+   GPAA +K+ + +   G +  NG
Sbjct:   20 EHRVKSLNDKLNSVEAESN-------KHETEAQEAIVGWEKTKAEVASLKKKLDEALNEKHRSEERSSHTDAGLK--ECVQQLRFVREEQERRMHDALTKASQEYERRLIVIKTELAGSGKRLAEAEGENAQLSKALLAKNKTVEDLNRERDRIEVDFNSLVSSLESKEKENVSLRYEVRVLEKELELRNEEREFSRRTAEASHKLHLENVKKVAKLESECQRLRVLVRKRLP-GPAALSKMSNEVEMLGRRRVNG 265          
BLAST of DY259770 vs. ExPASy Swiss-Prot
Match: FPP4_ARATH (Filament-like plant protein 4 OS=Arabidopsis thaliana GN=FPP4 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.014e-35
Identity = 96/311 (30.87%), Postives = 157/311 (50.48%), Query Frame = 3
Query:   90 MDQKAWLWRKKSSEKTIVATDKVG-----------VTFNQIDEQVPIVPTTKGVGS-----ERSMKNLNEKLASVIFDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDEALKPPLSANENLPYAGAATAPMRCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERVTKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKGNAFLKYEFRILEKELEISNEEMEYTRRSGEATINRHWESVKKVPSLKTEWEKAPPFGGKKAGWGPAASAKIKSRIPNGG 974
            MD+K+W W+KKSSEKT   T+ V            ++F+Q      +    K         E  +K+L+ KL++   D   K+ L+ + +K+ +EA  G EK E  A+ +K  L+      L+  +   +   A     C++Q+   + E EQ++HD +   + + +  + E E  + E  E + +  AEN  LS++L  +  M+  +S+ KSQAE+E   L   ++  E+    LKYE  ++ KELEI NEE   + RS EA   +H E VKK+  L+ E ++      KK   GPAA A++K  + + G
Sbjct:    1 MDRKSWPWKKKSSEKTATVTEVVDQENGKKPSYIQISFDQYTNLNGLKDEVKSYEEKVTKLEDQIKDLDLKLSTANADIVAKEVLVKQHSKVAEEAVTGWEKAEAEASALKTHLETITLAKLTVEDRAAHLDGALK--ECMRQIRSLKEENEQKLHDVIATKTNQMDNLRAEFESRIGEYEEELLRCGAENDALSRSLQERSNMLMRISEEKSQAESEIEHLKNNIESCEREINTLKYETHVITKELEIRNEEKNMSMRSAEAANKQHLEGVKKIAKLEAECQRLRTLVRKKLP-GPAALAQMKMEVESLG 308          
BLAST of DY259770 vs. ExPASy Swiss-Prot
Match: FPP5_ARATH (Filament-like plant protein 5 OS=Arabidopsis thaliana GN=FPP5 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 4.873e-30
Identity = 84/331 (25.38%), Postives = 162/331 (48.94%), Query Frame = 3
Query:   90 MDQKAWLWRKKSSEKTIVATDKVGVT----------------------------------FNQIDEQVPIVPTTKGVGSERSMKNLNEKLASVIFDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDEALKPPLSANENLPYAGAATAPMRCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERVTKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKGNAFLKYEFRILEKELEISNEEMEYTRRSGEATINRHWESVKKVPSLKTEWEKAPPFGGKKAGWGPAASAKIKSRIPNGGEK 980
            M+ + W W++KSS+K       VG+                                    +++++QV +         E  +K+L EKL     + + K+ L+ + AK+ +EA +G EK +     +K++L+      L+A +   +   A     C +Q+   + E ++++ D ++  + +++K + ELE  + E +E + + A++N+ L+++L  + +MI  +S+ +S+AEA+   L T L + EK  ++LKY+  +  KE+EI NEE   + +S +    +H E VKK+  L+ E  +      KK   GPAA A++K  +   G +
Sbjct:    1 MEGRGWPWKRKSSDKATTEKPVVGIESTPVCSLSYLASLENQEKCKNTNYVQITMDSYTHMSRMEDQVKLF--------EVQVKDLKEKLTLAHSEINTKESLILQHAKVAEEAVSGWEKADAETLALKRQLESVTLLKLTAEDRASHLDDALK--ECTRQIRIVKEESDKKLQDVILAKTSQWDKIKAELEGKIDELSEGLHRAASDNAALTRSLQERSEMIVRISEERSKAEADVEKLKTNLQLAEKEISYLKYDLHVASKEVEIRNEEKNMSLKSADIANKQHLEGVKKIAKLEAECHRLRGLLRKKLP-GPAAMAQMKLEVEGLGHE 320          
BLAST of DY259770 vs. ExPASy Swiss-Prot
Match: FPP6_ARATH (Filament-like plant protein 6 OS=Arabidopsis thaliana GN=FPP6 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.388e-29
Identity = 76/247 (30.77%), Postives = 134/247 (54.25%), Query Frame = 3
Query:  234 MKNLNEKLASVIFDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDEALKPPLSANENLPYAGAATAPMRCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERVTKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKGNAFLKYEFRILEKELEISNEEMEYTRRSGEATINRHWESVKKVPSLKTEWEKAPPFGGKKAGWGPAASAKIKSRIPNGG 974
            +++LNEKL+    +   K+ L+ + +K+ ++A +G EK +  A  +K  L+      L+A +   +   A     C++Q+   + + E ++HD  +  + + EK   E EK + +  + + + AA++  LS+ L  +  M+  +S+ KS+A+AE  TL + L++ E+    LKYE  ++ KELEI NEE     RS E+   +H E VKK+  L+ E ++      KK   GPAA A++K  + N G
Sbjct:  115 VEDLNEKLSVANEEIVTKEALVKQHSKVAEDAVSGWEKADAEALALKNTLESVTLSKLTAEDRAAHLDGALK--ECMRQIRNLKKDHEVKLHDVALSKTKQIEKMTMEFEKRMCDYEQELLRSAADSDALSRTLQERSNMLVKVSEEKSRADAEIETLKSNLEMCEREIKSLKYEVHVVSKELEIRNEEKNMCIRSAESANKQHLEGVKKIAKLEAECQRLRSLVRKKLP-GPAALAQMKLEVENLG 358          
BLAST of DY259770 vs. ExPASy Swiss-Prot
Match: FPP3_ARATH (Filament-like plant protein 3 OS=Arabidopsis thaliana GN=FPP3 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.471e-18
Identity = 67/278 (24.10%), Postives = 129/278 (46.40%), Query Frame = 3
Query:   90 MDQKAWLWRKKSSEKTIVATDKVGVTFNQIDE----------QVPIVPTTKGVGSERSMKNLNEKLASVIFDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDEALKPPLSANENLPYAGAATAPMRCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERVTKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKGNAFLKYEFRILEKELEISNEEMEYTRRSGEATINRHWESVKKVPSLKTEWEK 893
            MD+++WLWR+KSSEK+   T+  G   +  +           ++   P T+   +   +K L E+L++ + +   K++L  + AK+ +EA +G EK E  AA +K++LD +     +  +   +  +A     CV+QL   + EQ Q++ +A+     E+E  + +LE  + E   R                      +D++       +    L  +L+  EK N+ LK +     +E++I   E + + ++ E+   +  E +KK+  L+ E  K
Sbjct:    1 MDRRSWLWRRKSSEKSPGETESTGSVSSHSERFSDDQRSQSPELNSKPVTREEEATADIKILTERLSAALLNVSLKEDLAKQHAKVAEEAVSGWEKAENEAAALKQQLDASTSKVSALEDRNSHLDSAL--KECVRQLWQGREEQNQKIEEAINNKCKEWETTKSQLEARIEELQAR----------------------QDVT-----TSSVHEDLYPKLEALEKENSALKLQLLSKSEEVKIRTIERDLSTQAAESASKQQLEGIKKLTKLEAECRK 249          
BLAST of DY259770 vs. ExPASy Swiss-Prot
Match: FPP_SOLLC (Filament-like plant protein (Fragment) OS=Solanum lycopersicum GN=FPP PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.896e-14
Identity = 65/227 (28.63%), Postives = 106/227 (46.70%), Query Frame = 3
Query:  285 KDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDEALKPPLSANENLPYAGAATAPMRCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERVTKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFST---LMTRLDVTEKGNAFLKYEFRILEKELEISNEEMEYTRRSGEATINRHWESVKKVPSLKTEWEKAPPFGGKKAGWGPAASAKIKS 956
            K++L+ + AK+ +EA AG EK E   AV+K++LD A++  L+    + +   A     CV+QL   + EQE+ + DA+              EKN         ++ +E + L K LL  +  +E       +AE   ST   ++ RL   EK NA LK E     + LEI   E + + ++ E    +  ES+KK+  L+ E  K      K + +    S+ + S
Sbjct:    1 KEDLVKQHAKVAEEAIAGWEKAENEVAVLKQQLDAAVQQNLTLEVRVSHLDGALK--ECVRQLRQARDEQEKMIQDAMA-------------EKN---------EMESEKTALEKQLLKLQTQVE-----AGKAEMPTSTDPDILVRLKYLEKENAALKIELVSCSEVLEIRTIERDLSTQAAETASKQQLESIKKLTKLEVECRKLQAMARKSSPFNDQRSSAVSS 198          
BLAST of DY259770 vs. ExPASy Swiss-Prot
Match: FPP1_ARATH (Filament-like plant protein 1 OS=Arabidopsis thaliana GN=FPP1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.394e-14
Identity = 66/251 (26.29%), Postives = 112/251 (44.62%), Query Frame = 3
Query:  231 SMKNLNEKLASVIFDCHPKDELMAKQAKLVQEAGAGQEKPEVAAAVVKKELDEALKPPLSANENLPYAGAATAPMRCVKQLNFDQAEQEQRVHDAVVKTSGEFEKAQKELEKNLREANERVTKLAAENSHLSKALLVKEKMIEDLSKRKSQAEAEFSTLMTRLDVTEKGNAFLKYEFRILEKELEISNEEMEYTRRSGEATINRHWESVKKVPSLKTEWEKAPPFGGKKAGWGPAASAKIKSRIPNGGEKI 983
            SMK L EKL++ + +   KD+L+ +  K+ +EA AG EK E     +K++L+ A        + + +   A     CV+QL   + EQEQR+ DAV++ + E + ++  LE  + E        A ++  LS       +M E ++K                      N  L++E     +ELEI   E + + ++ E    +  +S+KKV  L+ E  K        A +    S    S   +GGE++
Sbjct:   61 SMKTLAEKLSAALANVSAKDDLVKQHVKVAEEAVAGWEKAENEVVELKEKLEAADDKNRVLEDRVSHLDGAL--KECVRQLRQARDEQEQRIQDAVIERTQELQSSRTSLENQIFET-------ATKSEELS-------QMAESVAKE---------------------NVMLRHELLARCEELEIRTIERDLSTQAAETASKQQLDSIKKVAKLEAECRKFRMLAKSSASFNDHRSTDSHS---DGGERM 271          
The following BLAST results are available for this feature:
BLAST of DY259770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
FPP7_ARATH8.861e-4038.28Filament-like plant protein 7 OS=Arabidopsis thali... [more]
FPP4_ARATH1.014e-3530.87Filament-like plant protein 4 OS=Arabidopsis thali... [more]
FPP5_ARATH4.873e-3025.38Filament-like plant protein 5 OS=Arabidopsis thali... [more]
FPP6_ARATH5.388e-2930.77Filament-like plant protein 6 OS=Arabidopsis thali... [more]
FPP3_ARATH1.471e-1824.10Filament-like plant protein 3 OS=Arabidopsis thali... [more]
FPP_SOLLC4.896e-1428.63Filament-like plant protein (Fragment) OS=Solanum ... [more]
FPP1_ARATH6.394e-1426.29Filament-like plant protein 1 OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP10YC10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259770 ID=DY259770; Name=DY259770; organism=Citrus clementina; type=EST; length=994bp
CTTCAAGCAAAGCTCCCTCTCTCATTCGCTCTCGCTTTCATTCCATTGCA
TATGCCAAAGCAATAACTAGGTAGTGCAGAATCTGAGTGATGGACCAGAA
GGCATGGCTTTGGAGGAAAAAATCTTCAGAAAAGACAATTGTTGCAACTG
ACAAAGTTGGCGTTACATTCAATCAAATTGATGAACAGGTACCCATAGTT
CCTACGACTAAAGGAGTAGGATCAGAGAGATCCATGAAGAATCTTAATGA
GAAGTTAGCTTCAGTGATCTTTGATTGTCATCCTAAAGATGAGCTTATGG
CAAAACAAGCAAAGCTGGTGCAAGAAGCTGGCGCAGGCCAAGAAAAGCCA
GAAGTGGCAGCGGCAGTGGTGAAAAAAGAACTTGATGAGGCTCTGAAGCC
TCCACTTTCTGCAAATGAAAACTTACCTTATGCAGGTGCTGCAACAGCAC
CAATGAGATGTGTGAAACAATTAAACTTTGATCAAGCAGAACAAGAGCAA
AGGGTCCATGACGCTGTCGTAAAAACATCAGGTGAGTTTGAGAAGGCGCA
GAAGGAATTGGAAAAGAATTTAAGAGAGGCAAATGAAAGAGTTACTAAGT
TAGCTGCTGAGAATAGCCATCTGAGTAAAGCACTTCTAGTCAAAGAGAAA
ATGATCGAAGATCTAAGCAAACGCAAGTCTCAGGCTGAAGCAGAATTCAG
TACCCTGATGACTAGATTAGATGTCACTGAAAAGGGAAATGCATTTTTGA
AGTATGAGTTTCGTATTCTTGAGAAAGAGCTTGAGATTTCAAACGAGGAA
ATGGAATATACCCGGAGATCTGGTGAGGCAACCATAAACCGCCATTGGGA
AAGCGTGAAGAAAGTCCCAAGTTTAAAAACAGAATGGGAAAAGGCACCCC
CTTTTGGTGGGAAAAAAGCTGGCTGGGGTCCGGCGGCTTCCGCCAAAATA
AAGAGCCGAATTCCAAATGGCGGGGAAAAAATTCCAAATGGATA
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