DY259779

Overview
NameDY259779
Unique NameDY259779
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length888
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11295 contig Ccv1_Contig11295:171..1058. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C76_ARATH (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 6.322e-63
Identity = 121/197 (61.42%), Postives = 153/197 (77.66%), Query Frame = 1
Query:  295 MLCNSYIRTVIVRV-VNIGSFTRTRLELSNINKSLHAGLR-----VGY--TWNREFRKSSKMMVDSAA--KRGPIVDVLPEKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKSERNTYRDDGSPAS 855
            M+C+S+IR+ IV+    IG   + R +  +I K+L  G       +G+  T    FR S+KMMVD++A  KR  +VD+ PEK DDGGY+ GGWK++DG L CGY SFRGKR+TMEDFYDIK S ++G+AVCMFG+FDGHGGSRAAEYLKEHLF NL+KHPQF+TDTKLA++ETY+QTDV FL+SE++TYRDDGS AS
Sbjct:    1 MVCSSFIRSFIVQAGCRIGVLAQGRHQFIHIKKTLSVGFGFRTSVIGFRTTSGIGFRTSAKMMVDTSAGEKRISLVDMPPEKVDDGGYIGGGWKNDDGSLSCGYCSFRGKRSTMEDFYDIKASTIEGQAVCMFGIFDGHGGSRAAEYLKEHLFNNLMKHPQFLTDTKLALNETYKQTDVAFLESEKDTYRDDGSTAS 197          
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.367e-49
Identity = 96/159 (60.38%), Postives = 118/159 (74.21%), Query Frame = 1
Query:  415 GYTWNREFRKSSKMMVDSAAKRGPIVDVLPEKEDDG------------GYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKSERNTYRDDGSPAS 855
            G++  R  R +++MM+DS+        + P++   G            GY SGGW  EDGKL+CGYSSFRGKRATMEDFYD+K + +DG+AV +FGVFDGHGG RAAEYLKE+LFENLLKHP+F+TDTKLAISETYQ+TD  FL+SE N +RDDGS AS
Sbjct:   49 GHSGWRGLRVAARMMLDSSDSAAAAGQMQPQQRAAGAVACSAQDGGAAGYASGGWAREDGKLKCGYSSFRGKRATMEDFYDVKLTEIDGQAVSLFGVFDGHGGPRAAEYLKENLFENLLKHPEFLTDTKLAISETYQKTDTDFLESESNAFRDDGSTAS 207          
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.368e-48
Identity = 88/117 (75.21%), Postives = 104/117 (88.89%), Query Frame = 1
Query:  505 EKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKSERNTYRDDGSPAS 855
            E+ D+ GY+SGGWKSEDG L CGYSSFRGKRA+MEDFYDIK+S +D K + +FG+FDGHGGSRAAEYLKEHLFENL+KHP+FMT+TKLAISETY++TD  FL SE +T+RDDGS AS
Sbjct:  209 ERVDEVGYMSGGWKSEDGFLSCGYSSFRGKRASMEDFYDIKSSKIDDKQISLFGIFDGHGGSRAAEYLKEHLFENLMKHPEFMTNTKLAISETYKKTDSEFLDSESHTHRDDGSTAS 325          
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 1.049e-41
Identity = 76/117 (64.96%), Postives = 96/117 (82.05%), Query Frame = 1
Query:  505 EKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKSERNTYRDDGSPAS 855
            +++D+  Y+ GGW S+DG++ CGYSSFRG+RA MEDFYDIK+S VD   + +FG+FDGHGGS AAE+LK+HLFENLLKHP F+TDTK AISETY++TD  FL +E N  R+DGS AS
Sbjct:   95 DEDDEARYICGGWTSDDGRMSCGYSSFRGRRANMEDFYDIKSSKVDDNQINLFGIFDGHGGSHAAEHLKKHLFENLLKHPSFITDTKSAISETYRKTDSDFLDAETNINREDGSTAS 211          
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.163e-32
Identity = 69/123 (56.10%), Postives = 90/123 (73.17%), Query Frame = 1
Query:  505 EKEDDGGY------VSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKSERNTYRDDGSPAS 855
            E E++ G+      VSGG  SE+GK   GY+S  GKRA+MEDFY+ +   VDG+ + +FGVFDGHGG+RAAEY+K+HLF NL+KHP+F++D K AI+ETY  TD  FLK+E +  RD GS AS
Sbjct:   56 ELEEEMGFAGDCSPVSGGGLSENGKFSYGYASAPGKRASMEDFYETRIDGVDGETIGLFGVFDGHGGARAAEYVKQHLFSNLIKHPKFISDIKSAIAETYNHTDSEFLKAESSHTRDAGSTAS 178          
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C56_ORYSJ (Probable protein phosphatase 2C 56 OS=Oryza sativa subsp. japonica GN=Os06g0526800/Os06g0526950 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 9.844e-32
Identity = 65/111 (58.56%), Postives = 86/111 (77.48%), Query Frame = 1
Query:  523 GYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKS-ERNTYRDDGSPA 852
            G+++GG  SEDG+L   YSSF+G+R +MED + IK + ++ + V +FGVFDGHGGS AAEYLKEHLFENL+ HP+ + DTKLAIS+T+ +TD  FL+S   N +RDDGS A
Sbjct:   82 GWITGGSASEDGRLSWDYSSFKGRRPSMEDRFSIKMTTINEQTVSLFGVFDGHGGSLAAEYLKEHLFENLVNHPELLRDTKLAISQTFLKTDADFLESVSSNPFRDDGSTA 192          
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.679e-31
Identity = 64/113 (56.64%), Postives = 86/113 (76.11%), Query Frame = 1
Query:  517 DGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKSERNTYRDDGSPAS 855
            D G VSGG  S++GK   GY+S  GKR++MEDFY+ +   V+G+ V +FGVFDGHGG+RAAEY+K++LF NL++HP+F++DT  AI++ Y QTD  FLKSE +  RD GS AS
Sbjct:   17 DDGPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIRHPKFISDTTAAIADAYNQTDSEFLKSENSQNRDAGSTAS 129          
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 8.333e-31
Identity = 64/103 (62.14%), Postives = 84/103 (81.55%), Query Frame = 1
Query:  547 SEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKS-ERNTYRDDGSPA 852
            S+DGKL  GYSSF+G+R +MED   IK++ V+G+ V +FGVFDGHGG RAAEYLK+HLF+NL+KHP+F+ DTKLAI++T+ +TD  FL+S   + YRDDGS A
Sbjct:  116 SKDGKLSWGYSSFQGRRPSMEDRLSIKSTTVNGETVSLFGVFDGHGGPRAAEYLKKHLFKNLVKHPKFLKDTKLAINQTFLKTDADFLQSISSDRYRDDGSTA 218          
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.214e-30
Identity = 61/108 (56.48%), Postives = 80/108 (74.07%), Query Frame = 1
Query:  532 SGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKSERNTYRDDGSPAS 855
            SGG  S++GK   GY+S  GKR++MEDF++ +   +DG+ V +FGVFDGHGGSRAAEY+K HLF NL+ HP+F++DTK AI++ Y  TD   LKSE +  RD GS AS
Sbjct:   22 SGGGLSQNGKFSYGYASSAGKRSSMEDFFETRIDGIDGEIVGLFGVFDGHGGSRAAEYVKRHLFSNLITHPKFISDTKSAIADAYTHTDSELLKSENSHTRDAGSTAS 129          
BLAST of DY259779 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.681e-29
Identity = 64/115 (55.65%), Postives = 82/115 (71.30%), Query Frame = 1
Query:  511 EDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGKAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVHFLKSERNTYRDDGSPAS 855
            E  G   SGG  S +GK   GY+S  GKR++MEDFYD +   VDG+ V +FGVFDGHGG+RAAE++K++LF NL+KHP+  +DTK AI+ETY  TD   LK+E +  RD GS AS
Sbjct:   46 EAAGSPGSGGGFSANGKFSYGYASSPGKRSSMEDFYDTRIDGVDGETVGLFGVFDGHGGARAAEFVKQNLFTNLIKHPKLFSDTKSAIAETYTSTDSELLKAETSHNRDAGSTAS 160          
The following BLAST results are available for this feature:
BLAST of DY259779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
P2C76_ARATH6.322e-6361.42Probable protein phosphatase 2C 76 OS=Arabidopsis ... [more]
P2C13_ORYSJ1.367e-4960.38Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
P2C52_ORYSJ3.368e-4875.21Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C07_ORYSJ1.049e-4164.96Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
P2C10_ORYSJ1.163e-3256.10Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C56_ORYSJ9.844e-3258.56Probable protein phosphatase 2C 56 OS=Oryza sativa... [more]
P2C59_ARATH1.679e-3156.64Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C55_ORYSJ8.333e-3162.14Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]
P2C71_ARATH9.214e-3056.48Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
P2C59_ORYSJ2.681e-2955.65Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YC19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259779 ID=DY259779; Name=DY259779; organism=Citrus clementina; type=EST; length=888bp
CTCCATCGCTCCAGAGAGAGAAAGAAATTGCAACACCAACATCTACTCAC
CTGCTTCCACGTGTCCCATCATCCGACCCGAAACCGATCACCACCCCGCT
CCCCCTCCGATCCGATCCGCCTTCCAAACTAGATCTGTAATTTGCTTTGA
ATATTCTGGTCCCCATTTCAAAAAAAAAGAAGAAGCAATCTTTATTTCAA
AAAGCTTCATTTTATGACTCCAATAGTTTAAAAAAATTGTTGTGTTATTG
TGGGGTTGGTGATCTGGCATTGAAGGCCGGAGTGAATAATTTAGATGTTA
TGCAACAGTTATATAAGGACTGTGATTGTGCGAGTTGTGAATATTGGATC
GTTTACGAGAACGAGGCTGGAATTAAGCAACATAAACAAGAGTTTGCATG
CGGGTCTTCGTGTAGGCTATACTTGGAATCGAGAATTTAGAAAGAGCTCC
AAGATGATGGTTGATTCGGCAGCGAAGCGGGGACCCATTGTCGATGTATT
ACCCGAGAAAGAGGATGACGGTGGTTATGTCAGCGGAGGGTGGAAAAGTG
AAGATGGAAAACTGAGATGTGGATACTCAAGTTTTAGGGGAAAGAGGGCA
ACTATGGAGGATTTCTATGACATTAAAACTTCCAATGTTGATGGGAAAGC
TGTCTGCATGTTTGGAGTCTTTGATGGTCATGGTGGTTCCCGTGCGGCTG
AGTATTTGAAGGAGCACCTCTTTGAGAATCTCTTGAAGCATCCACAATTT
ATGACAGACACCAAATTGGCTATAAGTGAAACATATCAACAGACTGATGT
CCACTTTTTGAAATCTGAAAGAAATACTTACAGGGATGATGGTTCTCCGG
CTTCACGGCCTGATTGGTTGGTAACCATCCTAAATGTG
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