DY259786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP3S2_PONAB (AP-3 complex subunit sigma-2 OS=Pongo abelii GN=AP3S2 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.081e-39 Identity = 76/150 (50.67%), Postives = 109/150 (72.67%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGT-RLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCSPS 554 MI++++V N GKPRL +FY P E QQ+++R F ++ R DN+ NF+E S+ G +L+Y+H+ATLYFVF DSSE+EL +LDLIQVFVETLDKCF+NVCELD++++ K+H IL E++ GG VLET+ E++ +E ++ S Sbjct: 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQIEAQNRLEKS 150
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP3S2_MOUSE (AP-3 complex subunit sigma-2 OS=Mus musculus GN=Ap3s2 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.081e-39 Identity = 76/150 (50.67%), Postives = 109/150 (72.67%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGT-RLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCSPS 554 MI++++V N GKPRL +FY P E QQ+++R F ++ R DN+ NF+E S+ G +L+Y+H+ATLYFVF DSSE+EL +LDLIQVFVETLDKCF+NVCELD++++ K+H IL E++ GG VLET+ E++ +E ++ S Sbjct: 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQIEAQNRLEKS 150
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP3S2_HUMAN (AP-3 complex subunit sigma-2 OS=Homo sapiens GN=AP3S2 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.081e-39 Identity = 76/150 (50.67%), Postives = 109/150 (72.67%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGT-RLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCSPS 554 MI++++V N GKPRL +FY P E QQ+++R F ++ R DN+ NF+E S+ G +L+Y+H+ATLYFVF DSSE+EL +LDLIQVFVETLDKCF+NVCELD++++ K+H IL E++ GG VLET+ E++ +E ++ S Sbjct: 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQIEAQNRLEKS 150
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP3S2_BOVIN (AP-3 complex subunit sigma-2 OS=Bos taurus GN=AP3S2 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.081e-39 Identity = 76/150 (50.67%), Postives = 109/150 (72.67%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGT-RLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCSPS 554 MI++++V N GKPRL +FY P E QQ+++R F ++ R DN+ NF+E S+ G +L+Y+H+ATLYFVF DSSE+EL +LDLIQVFVETLDKCF+NVCELD++++ K+H IL E++ GG VLET+ E++ +E ++ S Sbjct: 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQIEAQNRLEKS 150
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP3S1_MOUSE (AP-3 complex subunit sigma-1 OS=Mus musculus GN=Ap3s1 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.561e-38 Identity = 75/150 (50.00%), Postives = 108/150 (72.00%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPG-TRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCSPS 554 MIK++++ N GKPRL+KFY + QQ++IR F ++ R +NV NF+E + G +L+Y+H+ATLYFVF DSSE+EL +LDLIQVFVETLDKCF+NVCELD++++ K+H IL E++ GG VLET+ E++ ++ +K S Sbjct: 1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQIDAQNKLEKS 150
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP3S1_HUMAN (AP-3 complex subunit sigma-1 OS=Homo sapiens GN=AP3S1 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.561e-38 Identity = 75/150 (50.00%), Postives = 108/150 (72.00%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPG-TRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCSPS 554 MIK++++ N GKPRL+KFY + QQ++IR F ++ R +NV NF+E + G +L+Y+H+ATLYFVF DSSE+EL +LDLIQVFVETLDKCF+NVCELD++++ K+H IL E++ GG VLET+ E++ ++ +K S Sbjct: 1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQIDAQNKLEKS 150
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP3S1_BOVIN (AP-3 complex subunit sigma-1 OS=Bos taurus GN=AP3S1 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.561e-38 Identity = 75/150 (50.00%), Postives = 108/150 (72.00%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPG-TRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCSPS 554 MIK++++ N GKPRL+KFY + QQ++IR F ++ R +NV NF+E + G +L+Y+H+ATLYFVF DSSE+EL +LDLIQVFVETLDKCF+NVCELD++++ K+H IL E++ GG VLET+ E++ ++ +K S Sbjct: 1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQIDAQNKLEKS 150
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP3S_DICDI (AP-3 complex subunit sigma OS=Dictyostelium discoideum GN=ap3s1 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 6.559e-37 Identity = 70/135 (51.85%), Postives = 104/135 (77.04%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEA---DSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETS 503 MIKS++++N GKPRL KFY+ EKQQ++IR +F ++ R + NF+E +IF T+++Y+H+ATL+F+F DSSE+EL+++DLIQ FVE+LDKCF+NVCELD++++ K+H ILDE++ GG VLET+ Sbjct: 1 MIKSILIINNHGKPRLIKFYEHYSEEKQQQIIRELFLLVSKRTERSCNFLEIGNNSNIFDKDTKIIYRHYATLFFIFCVDSSESELSIIDLIQTFVESLDKCFENVCELDLIFHIDKVHYILDEMVMGGLVLETN 135
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP3S_SCHPO (AP-3 complex subunit sigma OS=Schizosaccharomyces pombe GN=aps3 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.672e-32 Identity = 68/141 (48.23%), Postives = 96/141 (68.09%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADNVSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVE 530 MI +V + N +GKPRL KFY QQ+LI ++ + R NF+E++ I G R++Y+ +ATLYFVFV D E+EL +LDLIQVFVE LD+CF NVCELD+V+ + ++H IL E++ GG VLET+ E++ A + Sbjct: 1 MIYAVFIFNNKGKPRLTKFYTPIDESIQQKLIGDIYAAVSTRPPTACNFLESNLIAGKN-RIIYRQYATLYFVFVVDEGESELGILDLIQVFVEALDRCFNNVCELDLVFKFQEIHAILAEVVSGGLVLETNLNEIVLAAQ 140
BLAST of DY259786 vs. ExPASy Swiss-Prot
Match: AP3S_YEAST (AP-3 complex subunit sigma OS=Saccharomyces cerevisiae GN=APS3 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.762e-27 Identity = 61/162 (37.65%), Postives = 102/162 (62.96%), Query Frame = 3 Query: 108 MIKSVMVMNTQGKPRLAKFYDFQPVEKQQELIRSVFGVLCGRADN-------------VSNFVEADSIFGPGTRLVYKHFATLYFVFVFDSSENELAMLDLIQVFVETLDKCFKNVCELDIVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKCSPS 554 MI +V++ N + +PRL KFY + KQ+ L+ V+ ++ R + +SN D + +++YK++ATLYF F+ D E+ELA+LDLIQ FVE+LD+CF V ELD+++N+ L ++L+EI+ GG V+ET+ ++ +V+E++K + S Sbjct: 1 MIHAVLIFNKKCQPRLVKFYTPVDLPKQKLLLEQVYELISQRNSDFQSSFLVTPPSLLLSNENNNDEVNNEDIQIIYKNYATLYFTFIVDDQESELAILDLIQTFVESLDRCFTEVNELDLIFNWQTLESVLEEIVQGGMVIETNVNRIVASVDELNKAAES 162 The following BLAST results are available for this feature:
BLAST of DY259786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259786 ID=DY259786; Name=DY259786; organism=Citrus clementina; type=EST; length=950bpback to top |