DY259788

Overview
NameDY259788
Unique NameDY259788
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1011
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY259788 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.050e-11
Identity = 78/270 (28.89%), Postives = 117/270 (43.33%), Query Frame = 2 
Query:   14 MIFLLLLSVFLRGASSSILSEDTPISFSFPSFAKDSCDNKTLICYG--AIESSG-ALSITPGPPPNLPIR-KVGRVLYGKPLSLQRSFID------TTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPGDKFPPL----AVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDV--DLKSGRAIQVRIYYNPDFGQLSVYAAYSGETLVK--VVEKPLNLSDIIPTPVYVGFTAATGDFLESHEVINWTLHS 769
            + F+ L  + L   +SS       +SF+F +F  D  D   LI  G   I S G +L +T       P+R  VGR LY  PL L  S  +      TT T  +S   + T+  GDG+ F  A  +        G  LGL S        L    AVE DT +N N                + N + S   V    ++G     +I YN D  +LSV ++Y      +   V   ++L   +P  V VGF+ +TG ++++H +++WT +S
Sbjct:   20 LAFITLFLMLLNRVNSS-----DSLSFTFDNFRPDQRD---LILQGDAKISSGGDSLQLTKTDTSGKPVRGSVGRALYYTPLHLWDSSTNRLASFQTTFTFVLS---SPTNNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNN------WDPSHRHIGIDVNTIKSSATVRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGGYVQNHNILSWTFNS 272
The following BLAST results are available for this feature:
BLAST of DY259788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEC2_CLALU1.050e-1128.89Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionKN0AAP10YD04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259788 ID=DY259788; Name=DY259788; organism=Citrus clementina; type=EST; length=1011bp
CGCAGAACAAAAAATGATTTTCCTACTACTCCTCTCCGTTTTTCTTCGCG
GAGCTTCTTCATCAATCCTTTCCGAAGACACACCTATTAGCTTCTCATTT
CCCTCATTCGCCAAAGACAGTTGTGACAATAAGACCCTCATTTGCTACGG
AGCGATTGAAAGTTCCGGCGCCTTAAGCATCACACCAGGCCCTCCACCAA
ACCTGCCGATCAGAAAGGTTGGACGGGTTTTATACGGCAAGCCTCTGAGT
TTACAGCGATCTTTTATTGATACCACCATCACCATTAAGATCTCACGCCA
TCAGAATTACACTGATCGTGCCGGAGATGGCATGACGTTCATTTTTGCAA
GCGATAAAAACGGTCCATCAGCAAAGGGCGTCGGCGAATATCTTGGACTG
CAGTCTTCACCAGGCGATAAATTTCCTCCATTAGCCGTGGAGCTGGACAC
ATGCCTGAACAAGAACCTGAATGATCCAGATGATAACCATATTGGCATCG
ACATAAACGGAATCGAATCAAATCCAGTTAATAGTCTGCTTGACGTTGAT
CTCAAAAGTGGACGAGCAATCCAGGTTCGAATTTATTACAATCCAGACTT
TGGACAACTCTCTGTTTATGCGGCATATTCGGGGGAAACACTTGTGAAGG
TGGTTGAAAAACCCCTTAACCTGTCAGATATAATTCCAACGCCCGTCTAT
GTTGGATTCACAGCAGCCACGGGGGACTTTTTAGAAAGCCATGAGGTTAT
AAATTGGACCCTTCACTCGTTCCCAGTGCCGCCCTCTCCCAGGAGAAAAA
CCTGGTGATGCCAATAAATTTCAACCCGTCCTTGGAAAACCTGCCCCTAA
ATTAAAATCCTTAATATTTAATAATCCACCATAAAGGGACGGGGCCCTGG
CTTTAAATATTGAATAAATGGAAACCGCGCACAGGATTAAAACGGTTTGC
TTGCCGGCCGAAAGTTACGGTAGGGGCCTAGGTTAAAAAGGCCCCAATTT
CCCCTCTTTTG
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