DY259789

Overview
NameDY259789
Unique NameDY259789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length915
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14344 contig Ccv1_Contig14344:103..1017. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.072e-32
Identity = 87/253 (34.39%), Postives = 134/253 (52.96%), Query Frame = 3
Query:    9 QNIMEIDD------EIPVIDL-----STDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKV--KRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFK--EQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQ-DDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            Q+  E+DD      EIP+ID+     ST     V ++  AC++WGFFQ++NHG  S    +++   ++FF+ P+EEK+K   + DE+   G           DW ++F   +Q              ELR+  + +P+ PL FR+  E Y+ EV+                  + L+  F   +    +R NYYPPCP P+  +G+ PH D   LTVL Q +DV GLQIKK  +G+W+PV P+P+A+I++IG+
Sbjct:   38 QDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQ------------PVELRK-PHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKK--DGKWVPVKPLPNAFIVNIGD 275          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.370e-28
Identity = 82/246 (33.33%), Postives = 120/246 (48.78%), Query Frame = 3
Query:    3 KVQNIMEIDDEIPVIDLSTDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVK-RDEVH----PMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRF---NYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIG 716
            + +  + + +++P+IDL      LV ++  ACQ +G FQVINHG P EL     +  KEFF  P EEK+K K + E      P+    + + +  +   E F +W      L     P D++   L N WPE P  +RE+   Y+ EV K                     GYF  + + ++    NYYPPCP P   LG G H DG  +T+L Q D+ GLQ     +  WI V PIP A+++++G
Sbjct:   24 RAEKDVPVGNDVPIIDLQQHHHLLVQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDT---LAHGCHPLDQD---LVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKL----GYFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLL-QQDLPGLQQLIVKDATWIAVQPIPTAFVVNLG 258          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.536e-27
Identity = 71/241 (29.46%), Postives = 116/241 (48.13%), Query Frame = 3
Query:   21 EIDDEIPVIDLS----TDPK--QLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            E  DEIPVI L+     D K  ++  E+  AC+ WG FQV++HG  + L A + + A++FF  P EEK +         G+    H +   V+DW+E+  ++                   R  ++WP+ P G+ ++ E+Y+ ++                   + L     +    +  NYYP CP P+L LG+  H D G +T+L QD VGGLQ  +     WI V P+  A+++++G+
Sbjct:   32 EFSDEIPVISLAGIDDVDGKRGEICREIVEACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVR-------------NRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVQPVEGAFVVNLGD 259          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.958e-27
Identity = 69/239 (28.87%), Postives = 117/239 (48.95%), Query Frame = 3
Query:   21 EIDDEIPVIDLS----TDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            E  ++IPVI L+        ++  ++  AC+ WG FQV++HG   +L A + + A+EFF  P EEK +         G+    H +   V+DW+E+  ++         S   + ++  R    WP+ P G+ ++ E+Y+ ++                   + L     +    +  NYYP CP P+L LG+  H D G +T+L QD VGGLQ  +     WI V P+P A+++++G+
Sbjct:   36 EFSNDIPVISLAGIDGEKRGEICRKIVEACEDWGIFQVVDHGVGDDLIADMTRLAREFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYF---------SYPTNSRDYTR----WPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGLELEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVPGAFVVNLGD 261          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.301e-26
Identity = 71/243 (29.22%), Postives = 115/243 (47.33%), Query Frame = 3
Query:   21 EIDDEIPVIDLSTDPKQLVLEVGHACQK-------WGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELR-RLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +  +EIPVI L+ +  +L   V   C+K       WG FQV+NHG  S L + + + A+EFF  P EE  +         G+    H +   V+DW+E+  ++                 LR R  ++WP+ P G+R + ++Y+ ++                   D L     +    +  N+YP CP P+L LG+  H D G +T+L QD VGGLQ  +     WI V P+  A+++++G+
Sbjct:   33 DFSNEIPVISLTKESMKLAAVVDEICRKIVEACEDWGIFQVVNHGVDSNLISEMTRLAREFFALPPEENVRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYF--------------SYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNACVDMDQKVVVNFYPQCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGD 261          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 6.455e-26
Identity = 76/244 (31.15%), Postives = 116/244 (47.54%), Query Frame = 3
Query:   12 NIMEIDDEIPVIDLS---TDPKQLVLE---VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQ--EHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            N++E+D  +P+IDL    +DP   +     +  AC+K GFF V+NHG   EL +   +    FFD P+ EKQ+V R     +GY             WKE   F   D   +  S    D     L + +  +   ++E CE     +                   D  + +F+E  + +R NYYPPC  P+L LG GPH D  +LT+L QD V GLQ+  ++  +W  + P P A++++IG+
Sbjct:   55 NVLELD--VPLIDLQNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDMPLSEKQRVLRKSGESVGYASSFTGRFSTKLPWKETLSFRFCDD--MSRSKSVQDYFCDALGHGFQPFGKVYQEYCE----AMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVEN--QWRSIRPNPKAFVVNIGD 288          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.455e-26
Identity = 76/236 (32.20%), Postives = 120/236 (50.85%), Query Frame = 3
Query:   33 EIPVIDLS-TDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDE----VHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQ-GYFKEQTTFL-RFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            E+PVIDLS +D K++V  V  A ++WG FQV+NHG P+E+  ++++  K FF+ P EEK+ + + E    +   G   Q+     + W +     +  P+ +                 WP+ P  +RE  E+YA+ ++                  +  + G   +   +L + NYYPPCP P+LALGV  H D  A+TVL  ++V GLQ+ K  +G W     IP+A I+ IG+
Sbjct:   42 EVPVIDLSDSDEKKIVGLVSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFELPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQ-------------FWPKNPPAYREANEEYAKRLQLVVDNLFKYLSLGLDLEPNSFKDGAGGDDLVYLMKINYYPPCPRPDLALGVA-HTDMSAITVLVPNEVPGLQVYK--DGHWYDCKYIPNALIVHIGD 261          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.455e-26
Identity = 68/238 (28.57%), Postives = 115/238 (48.32%), Query Frame = 3
Query:   30 DEIPVIDLS----TDPK--QLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            DEIPVI L+     D K  ++  ++  AC+ WG FQV++HG  + L A + + A++FF  P E+K +         G+    H +   V+DW+E+  ++                   R  ++WP+ P G+ ++ E+Y+  +                   + L     +    +  NYYP CP P+L LG+  H D G +T+L QD VGGLQ  + +   WI V P+  A+++++G+
Sbjct:   36 DEIPVISLAGIDDVDGKRGEICRQIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVR-------------NRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKTWITVQPVEGAFVVNLGD 260          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.430e-26
Identity = 72/245 (29.39%), Postives = 116/245 (47.35%), Query Frame = 3
Query:   21 EIDDEIPVIDL------STDPK-QLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEV---FDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            +  DEIPVI L      S D + Q+  ++  AC+ WG FQV++HG   +L + + + A++FF  P EEK +         G+    H +   V+DW+E+   F + +Q   +                ++WP+ P G+R + E Y+ E+                   + L     +    +  NYYP CP P L LG+  H D G +T+L QD VGGLQ  +     WI V P+  A+++++G+
Sbjct:   33 KFSDEIPVISLAGIDDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRFDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIQARDY----------------SRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACVDMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGD 261          
BLAST of DY259789 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.438e-25
Identity = 74/239 (30.96%), Postives = 112/239 (46.86%), Query Frame = 3
Query:   33 EIPVIDLST-------DPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTK--NVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEY-PLGFRELCEDYAREVEKXXXXXXXXXXXXXXXXADRLQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQIKKKSNGEWIPV*PIPDAYIISIGE 719
            ++PV+D+           ++   +V  AC   GFFQV  HG  + L       A +FF  P+ EK++ +R      GY      +  +   WKE   F   D    P   +     L       P++ P+G   + + Y  E+++                    + +F + ++ +R NYYPPCP PE  LG GPH D  ALT+L QDDVGGL++    +GEW PV P+P A +I+IG+
Sbjct:   62 DMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLG------PDFAPMG--RVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEV--LVDGEWRPVSPVPGAMVINIGD 290          
The following BLAST results are available for this feature:
BLAST of DY259789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
SRG1_ARATH2.072e-3234.39Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
HY6H_HYONI2.370e-2833.33Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
FL3H_MATIN1.536e-2729.46Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_DIACA9.958e-2728.87Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FL3H_VITVI1.301e-2629.22Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
GAOX1_ARATH6.455e-2631.15Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
FLS_EUSGR6.455e-2632.20Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
FL3H_ARATH6.455e-2628.57Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FL3H_PETCR8.430e-2629.39Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
GAOX2_ORYSJ1.438e-2530.96Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP10YD05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259789 ID=DY259789; Name=DY259789; organism=Citrus clementina; type=EST; length=915bp
CAAAGGTTCAAAACATTATGGAAATAGATGATGAAATCCCAGTTATTGAT
CTCTCTACCGACCCCAAACAACTTGTCTTGGAAGTTGGCCATGCATGTCA
AAAGTGGGGATTTTTTCAAGTCATCAATCATGGGGCGCCATCAGAATTAA
AGGCCAGGATTGAAAAGGCAGCAAAAGAATTCTTTGATCAACCAATAGAG
GAGAAGCAGAAAGTGAAAAGAGATGAAGTTCATCCTATGGGATATCATGA
CCAGGAGCATACCAAGAATGTTAGGGACTGGAAGGAAGTGTTTGATTTTT
GGTTGCAAGATCCAACTTTTCTCCCAGCTTCTCCTGAGCCTGATGATAAG
GAGCTGAGGAGGCTCACTAACCAATGGCCTGAGTACCCTCTTGGATTTAG
GGAGTTATGTGAGGATTATGCTAGGGAGGTGGAAAAGCTAGCTTACAAGT
TACTGGAACTTATCTCCCTCAGCTTAGGCTTATCTGCTGATCGGTTGCAA
GGCTATTTTAAAGAACAAACAACCTTTCTGCGATTCAACTACTATCCTCC
TTGCCCTTATCCTGAGCTAGCTCTGGGCGTCGGTCCACACAAAGATGGAG
GTGCCTTAACGGTACTTGCTCAAGATGACGTTGGTGGACTTCAAATAAAG
AAGAAATCAAATGGAGAGTGGATTCCTGTTTAACCAATCCCAGATGCCTA
TATTATTAGCATTGGTGAAGCCCCCCCAGTTTGGAACCAATGATAATTAT
GAAAGTCCAAACCCCAAAGTGGTGGGTCAACCCTAAAAAAGGAAAGTTTT
TCGATTCCATTTCTTTCTTCTACCCGCCCAACAACTCATGATGTAAGCTT
TGTAATAAATTTGAAAAAAAGCCAACTCCCGCCAGGGAACGGCAATCTCG
GCGGGGCAAACTCCG
back to top